RNA–Protein interactions for RNA: ENST00000471724.5

SSR4-207, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 3

Gene SSR4, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-207ENST00000471724 PSME1Q06323 249 aa19.46■□□□□ 0.71
SSR4-207ENST00000471724 COL22A1Q8NFW1 1626 aaPredicted RBP19.46■□□□□ 0.71
SSR4-207ENST00000471724 KTN1Q86UP2 1357 aaKnown RBP19.45■□□□□ 0.7
SSR4-207ENST00000471724 EDC4Q6P2E9 1401 aaKnown RBP19.45■□□□□ 0.7
SSR4-207ENST00000471724 ZNF692Q9BU19 519 aaPredicted RBP19.45■□□□□ 0.7
SSR4-207ENST00000471724 SLC12A5Q9H2X9 1139 aa19.45■□□□□ 0.7
SSR4-207ENST00000471724 USP54Q70EL1 1684 aa19.44■□□□□ 0.7
SSR4-207ENST00000471724 C11orf95C9JLR9 678 aaPredicted RBP19.44■□□□□ 0.7
SSR4-207ENST00000471724 KRT28Q7Z3Y7 464 aa19.44■□□□□ 0.7
SSR4-207ENST00000471724 ABCA3Q99758 1704 aa19.44■□□□□ 0.7
SSR4-207ENST00000471724 WASHC2AQ641Q2 1341 aa19.44■□□□□ 0.7
SSR4-207ENST00000471724 PIK3C2AO00443 1686 aa19.43■□□□□ 0.7
SSR4-207ENST00000471724 DDX17Q92841 729 aaKnown RBP19.43■□□□□ 0.7
SSR4-207ENST00000471724 ARHGEF10O15013 1369 aa19.43■□□□□ 0.7
SSR4-207ENST00000471724 XPCQ01831 940 aaPredicted RBP19.42■□□□□ 0.7
SSR4-207ENST00000471724 CRYBG1Q9Y4K1 1723 aa19.42■□□□□ 0.7
SSR4-207ENST00000471724 SSH2Q76I76 1423 aa19.41■□□□□ 0.7
SSR4-207ENST00000471724 ANKRD26Q9UPS8 1709 aa19.4■□□□□ 0.7
SSR4-207ENST00000471724 MEX3CQ5U5Q3 659 aaKnown RBP19.4■□□□□ 0.7
SSR4-207ENST00000471724 ILDR2Q71H61 639 aa19.4■□□□□ 0.7
SSR4-207ENST00000471724 SPATA31A3Q5VYP0 1347 aa19.4■□□□□ 0.7
SSR4-207ENST00000471724 TTC21AQ8NDW8 1320 aa19.4■□□□□ 0.7
SSR4-207ENST00000471724 PNPLA6Q8IY17 1366 aa19.4■□□□□ 0.7
SSR4-207ENST00000471724 PHRF1Q9P1Y6 1649 aaKnown RBP19.4■□□□□ 0.7
SSR4-207ENST00000471724 NSD3Q9BZ95 1437 aa19.38■□□□□ 0.69
SSR4-207ENST00000471724 MARF1Q9Y4F3 1742 aaKnown RBP19.38■□□□□ 0.69
SSR4-207ENST00000471724 LRP6O75581 1613 aa19.37■□□□□ 0.69
SSR4-207ENST00000471724 PAK3O75914 559 aaPredicted RBP19.37■□□□□ 0.69
SSR4-207ENST00000471724 TTC21BQ7Z4L5 1316 aa19.35■□□□□ 0.69
SSR4-207ENST00000471724 NUTM2BA6NNL0 878 aaPredicted RBP19.35■□□□□ 0.69
SSR4-207ENST00000471724 NUTM2EB1AL46 878 aaPredicted RBP19.35■□□□□ 0.69
SSR4-207ENST00000471724 NUTM2AQ8IVF1 878 aaPredicted RBP19.35■□□□□ 0.69
SSR4-207ENST00000471724 ZNF316A6NFI3 1004 aaPredicted RBP19.34■□□□□ 0.69
SSR4-207ENST00000471724 RGS17Q9UGC6 210 aaPredicted RBP19.33■□□□□ 0.68
SSR4-207ENST00000471724 SLIT3O75094 1523 aa19.32■□□□□ 0.68
SSR4-207ENST00000471724 LMOD2Q6P5Q4 547 aa19.32■□□□□ 0.68
SSR4-207ENST00000471724 ZNF772Q68DY9 489 aaPredicted RBP19.31■□□□□ 0.68
SSR4-207ENST00000471724 ABTB2Q8N961 1025 aa19.31■□□□□ 0.68
SSR4-207ENST00000471724 PANK3Q9H999 370 aa19.31■□□□□ 0.68
SSR4-207ENST00000471724 OVOS2A0A0J9YW53 1432 aa19.31■□□□□ 0.68
SSR4-207ENST00000471724 OVOS2Q6IE36 1432 aa19.31■□□□□ 0.68
SSR4-207ENST00000471724 CGNL1Q0VF96 1302 aa19.3■□□□□ 0.68
SSR4-207ENST00000471724 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.3■□□□□ 0.68
SSR4-207ENST00000471724 NSD2O96028 1365 aa19.3■□□□□ 0.68
SSR4-207ENST00000471724 USP31Q70CQ4 1352 aa19.3■□□□□ 0.68
SSR4-207ENST00000471724 SOCS7O14512 581 aa19.29■□□□□ 0.68
SSR4-207ENST00000471724 NLRP13Q86W25 1043 aa19.29■□□□□ 0.68
SSR4-207ENST00000471724 CARD14Q9BXL6 1004 aa19.29■□□□□ 0.68
SSR4-207ENST00000471724 USP19O94966 1318 aa19.28■□□□□ 0.68
SSR4-207ENST00000471724 KNSTRNQ9Y448 316 aa19.28■□□□□ 0.68
SSR4-207ENST00000471724 LTN1O94822 1766 aa19.27■□□□□ 0.67
SSR4-207ENST00000471724 NLRP6P59044 892 aa19.26■□□□□ 0.67
SSR4-207ENST00000471724 NME9Q86XW9 330 aa19.26■□□□□ 0.67
SSR4-207ENST00000471724 HAP1P54257 671 aaPredicted RBP19.25■□□□□ 0.67
SSR4-207ENST00000471724 POTEAQ6S8J7 498 aa19.25■□□□□ 0.67
SSR4-207ENST00000471724 C8orf37Q96NL8 207 aa19.25■□□□□ 0.67
SSR4-207ENST00000471724 NFAT5O94916 1531 aa19.25■□□□□ 0.67
SSR4-207ENST00000471724 NPC1L1Q9UHC9 1359 aa19.24■□□□□ 0.67
SSR4-207ENST00000471724 ADAMTS2O95450 1211 aa19.24■□□□□ 0.67
SSR4-207ENST00000471724 COL14A1Q05707 1796 aaKnown RBP19.24■□□□□ 0.67
SSR4-207ENST00000471724 AFF2P51816 1311 aa19.24■□□□□ 0.67
SSR4-207ENST00000471724 PLCH1Q4KWH8 1693 aa19.24■□□□□ 0.67
SSR4-207ENST00000471724 NUTM2GQ5VZR2 741 aa19.23■□□□□ 0.67
SSR4-207ENST00000471724 NGLY1Q96IV0 654 aa19.23■□□□□ 0.67
SSR4-207ENST00000471724 COG3Q96JB2 828 aa19.23■□□□□ 0.67
SSR4-207ENST00000471724 ABCC6O95255 1503 aa19.22■□□□□ 0.67
SSR4-207ENST00000471724 FYB1O15117 783 aa19.22■□□□□ 0.67
SSR4-207ENST00000471724 NWD2Q9ULI1 1742 aa19.22■□□□□ 0.67
SSR4-207ENST00000471724 KCNH5Q8NCM2 988 aa19.21■□□□□ 0.67
SSR4-207ENST00000471724 PER1O15534 1290 aaPredicted RBP19.2■□□□□ 0.66
SSR4-207ENST00000471724 DDX10Q13206 875 aaKnown RBP19.2■□□□□ 0.66
SSR4-207ENST00000471724 GGNBP2Q9H3C7 697 aa19.2■□□□□ 0.66
SSR4-207ENST00000471724 CABLES1Q8TDN4 633 aa19.19■□□□□ 0.66
SSR4-207ENST00000471724 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.19■□□□□ 0.66
SSR4-207ENST00000471724 CPDO75976 1380 aa19.19■□□□□ 0.66
SSR4-207ENST00000471724 MAP2P11137 1827 aaKnown RBP19.18■□□□□ 0.66
SSR4-207ENST00000471724 PLEKHG5O94827 1062 aa19.18■□□□□ 0.66
SSR4-207ENST00000471724 AMER1Q5JTC6 1135 aaPredicted RBP19.18■□□□□ 0.66
SSR4-207ENST00000471724 LMO7Q8WWI1 1683 aa19.17■□□□□ 0.66
SSR4-207ENST00000471724 GCP02774 474 aa19.17■□□□□ 0.66
SSR4-207ENST00000471724 ZRANB1Q9UGI0 708 aa19.17■□□□□ 0.66
SSR4-207ENST00000471724 RXRBP28702 533 aa19.16■□□□□ 0.66
SSR4-207ENST00000471724 FNBP4Q8N3X1 1017 aaPredicted RBP19.16■□□□□ 0.66
SSR4-207ENST00000471724 NRAPQ86VF7 1730 aa19.15■□□□□ 0.66
SSR4-207ENST00000471724 COL18A1P39060 1754 aa19.15■□□□□ 0.66
SSR4-207ENST00000471724 USP21Q9UK80 565 aa19.15■□□□□ 0.66
SSR4-207ENST00000471724 KIAA0232Q92628 1395 aa19.15■□□□□ 0.66
SSR4-207ENST00000471724 QTRT2Q9H974 415 aaKnown RBP19.14■□□□□ 0.65
SSR4-207ENST00000471724 PRDM11Q9NQV5 511 aa19.14■□□□□ 0.65
SSR4-207ENST00000471724 AATKQ6ZMQ8 1374 aa19.14■□□□□ 0.65
SSR4-207ENST00000471724 CDK12Q9NYV4 1490 aaPredicted RBP19.14■□□□□ 0.65
SSR4-207ENST00000471724 RGPD5Q99666 1765 aa19.14■□□□□ 0.65
SSR4-207ENST00000471724 TRPC5Q9UL62 973 aaPredicted RBP19.13■□□□□ 0.65
SSR4-207ENST00000471724 RTL1A6NKG5 1358 aa19.13■□□□□ 0.65
SSR4-207ENST00000471724 FAM208AQ9UK61 1670 aaKnown RBP19.13■□□□□ 0.65
SSR4-207ENST00000471724 SOX12O15370 315 aa19.12■□□□□ 0.65
SSR4-207ENST00000471724 RBM6P78332 1123 aaKnown RBP19.12■□□□□ 0.65
SSR4-207ENST00000471724 MORC1Q86VD1 984 aa19.12■□□□□ 0.65
SSR4-207ENST00000471724 KIF24Q5T7B8 1368 aa19.11■□□□□ 0.65
SSR4-207ENST00000471724 CC2D1BQ5T0F9 858 aaKnown RBP19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms