RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 NBPF8Q3BBV2 869 aa19.32■□□□□ 0.68
HMGN1-211ENST00000471260 ACEP12821 1306 aa19.31■□□□□ 0.68
HMGN1-211ENST00000471260 TOPAZ1Q8N9V7 1692 aa19.31■□□□□ 0.68
HMGN1-211ENST00000471260 TRPM1Q7Z4N2 1603 aa19.31■□□□□ 0.68
HMGN1-211ENST00000471260 ROCK2O75116 1388 aaKnown RBP19.31■□□□□ 0.68
HMGN1-211ENST00000471260 RALGAPBQ86X10 1494 aa19.3■□□□□ 0.68
HMGN1-211ENST00000471260 PLEKHG5O94827 1062 aa19.3■□□□□ 0.68
HMGN1-211ENST00000471260 BRD4O60885 1362 aaPredicted RBP19.29■□□□□ 0.68
HMGN1-211ENST00000471260 EVC2Q86UK5 1308 aa19.28■□□□□ 0.68
HMGN1-211ENST00000471260 PLCH1Q4KWH8 1693 aa19.28■□□□□ 0.68
HMGN1-211ENST00000471260 GLI3P10071 1580 aa19.27■□□□□ 0.68
HMGN1-211ENST00000471260 QRICH2Q9H0J4 1663 aa19.27■□□□□ 0.68
HMGN1-211ENST00000471260 PPIP5K1Q6PFW1 1433 aa19.27■□□□□ 0.68
HMGN1-211ENST00000471260 ONECUT3O60422 494 aaPredicted RBP19.27■□□□□ 0.68
HMGN1-211ENST00000471260 CCDC125Q86Z20 511 aa19.27■□□□□ 0.68
HMGN1-211ENST00000471260 CABP2Q9NPB3 220 aa19.27■□□□□ 0.68
HMGN1-211ENST00000471260 BTG4Q9NY30 223 aa19.26■□□□□ 0.67
HMGN1-211ENST00000471260 COL14A1Q05707 1796 aaKnown RBP19.26■□□□□ 0.67
HMGN1-211ENST00000471260 PCGF6Q9BYE7 350 aa19.25■□□□□ 0.67
HMGN1-211ENST00000471260 CCDC9Q9Y3X0 531 aaKnown RBP19.25■□□□□ 0.67
HMGN1-211ENST00000471260 CRYBG1Q9Y4K1 1723 aa19.25■□□□□ 0.67
HMGN1-211ENST00000471260 TONSLQ96HA7 1378 aa19.24■□□□□ 0.67
HMGN1-211ENST00000471260 ABTB2Q8N961 1025 aa19.24■□□□□ 0.67
HMGN1-211ENST00000471260 PRDM11Q9NQV5 511 aa19.24■□□□□ 0.67
HMGN1-211ENST00000471260 NLRP13Q86W25 1043 aa19.22■□□□□ 0.67
HMGN1-211ENST00000471260 SEPT12Q8IYM1 358 aa19.22■□□□□ 0.67
HMGN1-211ENST00000471260 CABP1Q9NZU7 370 aa19.22■□□□□ 0.67
HMGN1-211ENST00000471260 NRAPQ86VF7 1730 aa19.21■□□□□ 0.67
HMGN1-211ENST00000471260 SBNO2Q9Y2G9 1366 aa19.2■□□□□ 0.66
HMGN1-211ENST00000471260 ZNF692Q9BU19 519 aaPredicted RBP19.2■□□□□ 0.66
HMGN1-211ENST00000471260 CARD11Q9BXL7 1154 aa19.2■□□□□ 0.66
HMGN1-211ENST00000471260 KIAA0232Q92628 1395 aa19.19■□□□□ 0.66
HMGN1-211ENST00000471260 NUTM2GQ5VZR2 741 aa19.19■□□□□ 0.66
HMGN1-211ENST00000471260 USP19O94966 1318 aa19.19■□□□□ 0.66
HMGN1-211ENST00000471260 PHRF1Q9P1Y6 1649 aaKnown RBP19.18■□□□□ 0.66
HMGN1-211ENST00000471260 USP6P35125 1406 aa19.18■□□□□ 0.66
HMGN1-211ENST00000471260 ZC3H6P61129 1189 aaKnown RBP19.18■□□□□ 0.66
HMGN1-211ENST00000471260 SPATA31A5Q5VU36 1347 aa19.18■□□□□ 0.66
HMGN1-211ENST00000471260 SPATA31A7Q8IWB4 1347 aa19.18■□□□□ 0.66
HMGN1-211ENST00000471260 CPDO75976 1380 aa19.18■□□□□ 0.66
HMGN1-211ENST00000471260 KRT27Q7Z3Y8 459 aa19.17■□□□□ 0.66
HMGN1-211ENST00000471260 GCP02774 474 aa19.15■□□□□ 0.66
HMGN1-211ENST00000471260 FAM98CQ17RN3 349 aaKnown RBP19.15■□□□□ 0.66
HMGN1-211ENST00000471260 BLMP54132 1417 aaPredicted RBP19.15■□□□□ 0.66
HMGN1-211ENST00000471260 SSH2Q76I76 1423 aa19.15■□□□□ 0.66
HMGN1-211ENST00000471260 BRWD3Q6RI45 1802 aa19.14■□□□□ 0.65
HMGN1-211ENST00000471260 CHRNA2Q15822 529 aa19.14■□□□□ 0.65
HMGN1-211ENST00000471260 NRKQ7Z2Y5 1582 aa19.14■□□□□ 0.65
HMGN1-211ENST00000471260 EP400Q96L91 3159 aa19.14■□□□□ 0.65
HMGN1-211ENST00000471260 A0A0G2JS52 829 aa19.13■□□□□ 0.65
HMGN1-211ENST00000471260 SLC24A1O60721 1099 aa19.13■□□□□ 0.65
HMGN1-211ENST00000471260 NLRP6P59044 892 aa19.13■□□□□ 0.65
HMGN1-211ENST00000471260 MYT1Q01538 1121 aa19.13■□□□□ 0.65
HMGN1-211ENST00000471260 SPATA31A1Q5TZJ5 1347 aa19.12■□□□□ 0.65
HMGN1-211ENST00000471260 EVA1CP58658 441 aa19.12■□□□□ 0.65
HMGN1-211ENST00000471260 PUS7Q96PZ0 661 aaKnown RBP19.12■□□□□ 0.65
HMGN1-211ENST00000471260 CPSF1Q10570 1443 aaKnown RBP19.11■□□□□ 0.65
HMGN1-211ENST00000471260 TTC21AQ8NDW8 1320 aa19.11■□□□□ 0.65
HMGN1-211ENST00000471260 SF3B2Q13435 895 aaKnown RBP19.11■□□□□ 0.65
HMGN1-211ENST00000471260 STRN4Q9NRL3 753 aa19.1■□□□□ 0.65
HMGN1-211ENST00000471260 TTC21BQ7Z4L5 1316 aa19.09■□□□□ 0.65
HMGN1-211ENST00000471260 SLIT3O75094 1523 aa19.09■□□□□ 0.65
HMGN1-211ENST00000471260 BARGINQ6ZT62 677 aa19.08■□□□□ 0.64
HMGN1-211ENST00000471260 KCNH5Q8NCM2 988 aa19.08■□□□□ 0.64
HMGN1-211ENST00000471260 LMO7Q8WWI1 1683 aa19.08■□□□□ 0.64
HMGN1-211ENST00000471260 CAMTA1Q9Y6Y1 1673 aa19.08■□□□□ 0.64
HMGN1-211ENST00000471260 AKAP12Q02952 1782 aa19.07■□□□□ 0.64
HMGN1-211ENST00000471260 THRAP3Q9Y2W1 955 aaKnown RBP19.07■□□□□ 0.64
HMGN1-211ENST00000471260 THSD7AQ9UPZ6 1657 aa19.07■□□□□ 0.64
HMGN1-211ENST00000471260 AATKQ6ZMQ8 1374 aa19.06■□□□□ 0.64
HMGN1-211ENST00000471260 KTN1Q86UP2 1357 aaKnown RBP19.06■□□□□ 0.64
HMGN1-211ENST00000471260 ZRANB1Q9UGI0 708 aa19.06■□□□□ 0.64
HMGN1-211ENST00000471260 PIK3C2AO00443 1686 aa19.05■□□□□ 0.64
HMGN1-211ENST00000471260 TIMELESSQ9UNS1 1208 aa19.05■□□□□ 0.64
HMGN1-211ENST00000471260 CLSPNQ9HAW4 1339 aa19.04■□□□□ 0.64
HMGN1-211ENST00000471260 LARP1Q6PKG0 1096 aaKnown RBP19.04■□□□□ 0.64
HMGN1-211ENST00000471260 TCP11L2Q8N4U5 519 aa19.04■□□□□ 0.64
HMGN1-211ENST00000471260 COL5A2P05997 1499 aaPredicted RBP19.03■□□□□ 0.64
HMGN1-211ENST00000471260 HDGFL2Q7Z4V5 671 aaPredicted RBP19.03■□□□□ 0.64
HMGN1-211ENST00000471260 ARHGEF25Q86VW2 580 aa19.02■□□□□ 0.64
HMGN1-211ENST00000471260 TMC1Q8TDI8 760 aa19.02■□□□□ 0.64
HMGN1-211ENST00000471260 TESK2Q96S53 571 aa19.02■□□□□ 0.64
HMGN1-211ENST00000471260 USP35Q9P2H5 1018 aa19.02■□□□□ 0.64
HMGN1-211ENST00000471260 ST20-MTHFSA0A0A6YYL1 179 aa19.01■□□□□ 0.63
HMGN1-211ENST00000471260 BAG6P46379 1132 aa19.01■□□□□ 0.63
HMGN1-211ENST00000471260 FAM196AQ6ZSG2 479 aa19.01■□□□□ 0.63
HMGN1-211ENST00000471260 TERF2IPQ9NYB0 399 aa19.01■□□□□ 0.63
HMGN1-211ENST00000471260 NINLQ9Y2I6 1382 aa19.01■□□□□ 0.63
HMGN1-211ENST00000471260 CRB1P82279 1406 aa19■□□□□ 0.63
HMGN1-211ENST00000471260 MON2Q7Z3U7 1717 aa19■□□□□ 0.63
HMGN1-211ENST00000471260 DEFB132Q7Z7B7 95 aa19■□□□□ 0.63
HMGN1-211ENST00000471260 SLC12A5Q9H2X9 1139 aa19■□□□□ 0.63
HMGN1-211ENST00000471260 USP31Q70CQ4 1352 aa19■□□□□ 0.63
HMGN1-211ENST00000471260 CD163L1Q9NR16 1453 aa19■□□□□ 0.63
HMGN1-211ENST00000471260 ZEB1P37275 1124 aaPredicted RBP18.99■□□□□ 0.63
HMGN1-211ENST00000471260 PDE3BQ13370 1112 aa18.99■□□□□ 0.63
HMGN1-211ENST00000471260 ZBTB7CA1YPR0 619 aa18.98■□□□□ 0.63
HMGN1-211ENST00000471260 C11orf95C9JLR9 678 aaPredicted RBP18.98■□□□□ 0.63
HMGN1-211ENST00000471260 EDC4Q6P2E9 1401 aaKnown RBP18.98■□□□□ 0.63
HMGN1-211ENST00000471260 COL18A1P39060 1754 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 143.6 ms