RNA–Protein interactions for RNA: ENST00000471157.2

CDKN1C-205, Transcript of cyclin dependent kinase inhibitor 1C, humanhuman

TSL 2

Gene CDKN1C, Length 944 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1C-205ENST00000471157 FNBP4Q8N3X1 1017 aaPredicted RBP34.9■■■■□ 3.18
CDKN1C-205ENST00000471157 USP21Q9UK80 565 aa34.89■■■■□ 3.18
CDKN1C-205ENST00000471157 ATAD2Q6PL18 1390 aa34.88■■■■□ 3.17
CDKN1C-205ENST00000471157 RXRBP28702 533 aa34.86■■■■□ 3.17
CDKN1C-205ENST00000471157 QTRT2Q9H974 415 aaKnown RBP34.86■■■■□ 3.17
CDKN1C-205ENST00000471157 ST20-MTHFSA0A0A6YYL1 179 aa34.85■■■■□ 3.17
CDKN1C-205ENST00000471157 BRD4O60885 1362 aaPredicted RBP34.82■■■■□ 3.16
CDKN1C-205ENST00000471157 USP47Q96K76 1375 aa34.82■■■■□ 3.16
CDKN1C-205ENST00000471157 USP6P35125 1406 aa34.81■■■■□ 3.16
CDKN1C-205ENST00000471157 TRPC5Q9UL62 973 aaPredicted RBP34.8■■■■□ 3.16
CDKN1C-205ENST00000471157 BCL9LQ86UU0 1499 aa34.79■■■■□ 3.16
CDKN1C-205ENST00000471157 CRYBG1Q9Y4K1 1723 aa34.79■■■■□ 3.16
CDKN1C-205ENST00000471157 NUTM2GQ5VZR2 741 aa34.79■■■■□ 3.16
CDKN1C-205ENST00000471157 ABTB2Q8N961 1025 aa34.79■■■■□ 3.16
CDKN1C-205ENST00000471157 TESK2Q96S53 571 aa34.79■■■■□ 3.16
CDKN1C-205ENST00000471157 SLIT2O94813 1529 aa34.79■■■■□ 3.16
CDKN1C-205ENST00000471157 RBM6P78332 1123 aaKnown RBP34.78■■■■□ 3.16
CDKN1C-205ENST00000471157 SLC24A1O60721 1099 aa34.77■■■■□ 3.16
CDKN1C-205ENST00000471157 ATRNO75882 1429 aa34.76■■■■□ 3.16
CDKN1C-205ENST00000471157 ZNF692Q9BU19 519 aaPredicted RBP34.75■■■■□ 3.15
CDKN1C-205ENST00000471157 CDK12Q9NYV4 1490 aaPredicted RBP34.74■■■■□ 3.15
CDKN1C-205ENST00000471157 UNC5CLQ8IV45 518 aa34.74■■■■□ 3.15
CDKN1C-205ENST00000471157 TNKS1BP1Q9C0C2 1729 aaKnown RBP34.73■■■■□ 3.15
CDKN1C-205ENST00000471157 AKAP12Q02952 1782 aa34.73■■■■□ 3.15
CDKN1C-205ENST00000471157 PUS7Q96PZ0 661 aaKnown RBP34.73■■■■□ 3.15
CDKN1C-205ENST00000471157 PHRF1Q9P1Y6 1649 aaKnown RBP34.73■■■■□ 3.15
CDKN1C-205ENST00000471157 PLCH1Q4KWH8 1693 aa34.72■■■■□ 3.15
CDKN1C-205ENST00000471157 FAM83GA6ND36 823 aa34.71■■■■□ 3.15
CDKN1C-205ENST00000471157 TMC1Q8TDI8 760 aa34.71■■■■□ 3.15
CDKN1C-205ENST00000471157 CPSF1Q10570 1443 aaKnown RBP34.71■■■■□ 3.15
CDKN1C-205ENST00000471157 SSH2Q76I76 1423 aa34.71■■■■□ 3.15
CDKN1C-205ENST00000471157 NLRP13Q86W25 1043 aa34.7■■■■□ 3.15
CDKN1C-205ENST00000471157 NWD2Q9ULI1 1742 aa34.69■■■■□ 3.14
CDKN1C-205ENST00000471157 KTN1Q86UP2 1357 aaKnown RBP34.68■■■■□ 3.14
CDKN1C-205ENST00000471157 COL14A1Q05707 1796 aaKnown RBP34.67■■■■□ 3.14
CDKN1C-205ENST00000471157 USP19O94966 1318 aa34.67■■■■□ 3.14
CDKN1C-205ENST00000471157 TMF1P82094 1093 aa34.66■■■■□ 3.14
CDKN1C-205ENST00000471157 PRDM11Q9NQV5 511 aa34.66■■■■□ 3.14
CDKN1C-205ENST00000471157 RGS12O14924 1447 aa34.65■■■■□ 3.14
CDKN1C-205ENST00000471157 TTC21BQ7Z4L5 1316 aa34.65■■■■□ 3.14
CDKN1C-205ENST00000471157 KIAA0232Q92628 1395 aa34.64■■■■□ 3.14
CDKN1C-205ENST00000471157 SLC12A5Q9H2X9 1139 aa34.64■■■■□ 3.14
CDKN1C-205ENST00000471157 NRKQ7Z2Y5 1582 aa34.64■■■■□ 3.14
CDKN1C-205ENST00000471157 NLRP6P59044 892 aa34.63■■■■□ 3.13
CDKN1C-205ENST00000471157 ZC3H6P61129 1189 aaKnown RBP34.63■■■■□ 3.13
CDKN1C-205ENST00000471157 HDGFL2Q7Z4V5 671 aaPredicted RBP34.63■■■■□ 3.13
CDKN1C-205ENST00000471157 GJD4Q96KN9 370 aaPredicted RBP34.63■■■■□ 3.13
CDKN1C-205ENST00000471157 BTG4Q9NY30 223 aa34.63■■■■□ 3.13
CDKN1C-205ENST00000471157 MON2Q7Z3U7 1717 aa34.63■■■■□ 3.13
CDKN1C-205ENST00000471157 CD163L1Q9NR16 1453 aa34.63■■■■□ 3.13
CDKN1C-205ENST00000471157 PIK3C2AO00443 1686 aa34.63■■■■□ 3.13
CDKN1C-205ENST00000471157 TTC21AQ8NDW8 1320 aa34.62■■■■□ 3.13
CDKN1C-205ENST00000471157 NINLQ9Y2I6 1382 aa34.61■■■■□ 3.13
CDKN1C-205ENST00000471157 TERF2IPQ9NYB0 399 aa34.6■■■■□ 3.13
CDKN1C-205ENST00000471157 NRAPQ86VF7 1730 aa34.59■■■■□ 3.13
CDKN1C-205ENST00000471157 VPS72Q15906 364 aa34.59■■■■□ 3.13
CDKN1C-205ENST00000471157 GCP02774 474 aa34.58■■■■□ 3.13
CDKN1C-205ENST00000471157 CHRNA2Q15822 529 aa34.57■■■■□ 3.12
CDKN1C-205ENST00000471157 CCDC9Q9Y3X0 531 aaKnown RBP34.57■■■■□ 3.12
CDKN1C-205ENST00000471157 A0A1W2PP64 1363 aa34.56■■■■□ 3.12
CDKN1C-205ENST00000471157 GLI3P10071 1580 aa34.56■■■■□ 3.12
CDKN1C-205ENST00000471157 SLIT3O75094 1523 aa34.55■■■■□ 3.12
CDKN1C-205ENST00000471157 CPDO75976 1380 aa34.55■■■■□ 3.12
CDKN1C-205ENST00000471157 CDCA8Q53HL2 280 aa34.55■■■■□ 3.12
CDKN1C-205ENST00000471157 SUGP2Q8IX01 1082 aaKnown RBP eCLIP34.53■■■■□ 3.12
CDKN1C-205ENST00000471157 EDC4Q6P2E9 1401 aaKnown RBP34.52■■■■□ 3.12
CDKN1C-205ENST00000471157 EIF4G2P78344 907 aaKnown RBP eCLIP34.51■■■■□ 3.12
CDKN1C-205ENST00000471157 ZBTB7CA1YPR0 619 aa34.46■■■■□ 3.11
CDKN1C-205ENST00000471157 NME9Q86XW9 330 aa34.46■■■■□ 3.11
CDKN1C-205ENST00000471157 KCNH5Q8NCM2 988 aa34.46■■■■□ 3.11
CDKN1C-205ENST00000471157 USP31Q70CQ4 1352 aa34.45■■■■□ 3.11
CDKN1C-205ENST00000471157 ANKRD36BQ8N2N9 1353 aa34.45■■■■□ 3.11
CDKN1C-205ENST00000471157 HSPA5P11021 654 aaKnown RBP34.44■■■■□ 3.1
CDKN1C-205ENST00000471157 STRN4Q9NRL3 753 aa34.44■■■■□ 3.1
CDKN1C-205ENST00000471157 LMO7Q8WWI1 1683 aa34.44■■■■□ 3.1
CDKN1C-205ENST00000471157 SOX12O15370 315 aa34.43■■■■□ 3.1
CDKN1C-205ENST00000471157 ZRANB1Q9UGI0 708 aa34.43■■■■□ 3.1
CDKN1C-205ENST00000471157 CAMTA1Q9Y6Y1 1673 aa34.43■■■■□ 3.1
CDKN1C-205ENST00000471157 EVA1CP58658 441 aa34.42■■■■□ 3.1
CDKN1C-205ENST00000471157 USP54Q70EL1 1684 aa34.41■■■■□ 3.1
CDKN1C-205ENST00000471157 SPATA31A5Q5VU36 1347 aa34.41■■■■□ 3.1
CDKN1C-205ENST00000471157 SPATA31A7Q8IWB4 1347 aa34.41■■■■□ 3.1
CDKN1C-205ENST00000471157 AATKQ6ZMQ8 1374 aa34.39■■■■□ 3.1
CDKN1C-205ENST00000471157 ONECUT3O60422 494 aaPredicted RBP34.38■■■■□ 3.09
CDKN1C-205ENST00000471157 SEPT12Q8IYM1 358 aa34.38■■■■□ 3.09
CDKN1C-205ENST00000471157 UPF1Q92900 1129 aaKnown RBP eCLIP34.38■■■■□ 3.09
CDKN1C-205ENST00000471157 NFAT5O94916 1531 aa34.38■■■■□ 3.09
CDKN1C-205ENST00000471157 FAM98CQ17RN3 349 aaKnown RBP34.37■■■■□ 3.09
CDKN1C-205ENST00000471157 ARHGEF25Q86VW2 580 aa34.36■■■■□ 3.09
CDKN1C-205ENST00000471157 A0A0G2JS52 829 aa34.35■■■■□ 3.09
CDKN1C-205ENST00000471157 MYT1Q01538 1121 aa34.35■■■■□ 3.09
CDKN1C-205ENST00000471157 MYOM1P52179 1685 aa34.35■■■■□ 3.09
CDKN1C-205ENST00000471157 SPATA31A1Q5TZJ5 1347 aa34.34■■■■□ 3.09
CDKN1C-205ENST00000471157 COL5A2P05997 1499 aaPredicted RBP34.34■■■■□ 3.09
CDKN1C-205ENST00000471157 OVOS2A0A0J9YW53 1432 aa34.34■■■■□ 3.09
CDKN1C-205ENST00000471157 OVOS2Q6IE36 1432 aa34.34■■■■□ 3.09
CDKN1C-205ENST00000471157 LARP1Q6PKG0 1096 aaKnown RBP34.33■■■■□ 3.09
CDKN1C-205ENST00000471157 POLR3GLQ9BT43 218 aa34.32■■■■□ 3.08
CDKN1C-205ENST00000471157 COL18A1P39060 1754 aa34.31■■■■□ 3.08
CDKN1C-205ENST00000471157 BRWD3Q6RI45 1802 aa34.3■■■■□ 3.08
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms