RNA–Protein interactions for RNA: ENST00000470478.1

SEC23IP-205, Transcript of SEC23 interacting protein, humanhuman

TSL 2

Gene SEC23IP, Length 285 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23IP-205ENST00000470478 PHRF1Q9P1Y6 1649 aaKnown RBP18.32■□□□□ 0.52
SEC23IP-205ENST00000470478 ZRANB1Q9UGI0 708 aa18.32■□□□□ 0.52
SEC23IP-205ENST00000470478 DEFB132Q7Z7B7 95 aa18.31■□□□□ 0.52
SEC23IP-205ENST00000470478 STAC3Q96MF2 364 aa18.31■□□□□ 0.52
SEC23IP-205ENST00000470478 CCDC9Q9Y3X0 531 aaKnown RBP18.31■□□□□ 0.52
SEC23IP-205ENST00000470478 BTG4Q9NY30 223 aa18.3■□□□□ 0.52
SEC23IP-205ENST00000470478 THSD7AQ9UPZ6 1657 aa18.29■□□□□ 0.52
SEC23IP-205ENST00000470478 KRT27Q7Z3Y8 459 aa18.29■□□□□ 0.52
SEC23IP-205ENST00000470478 NGDNQ8NEJ9 315 aaKnown RBP18.29■□□□□ 0.52
SEC23IP-205ENST00000470478 NUDT16Q96DE0 195 aaKnown RBP18.28■□□□□ 0.52
SEC23IP-205ENST00000470478 FAM98CQ17RN3 349 aaKnown RBP18.27■□□□□ 0.52
SEC23IP-205ENST00000470478 PAK3O75914 559 aaPredicted RBP18.25■□□□□ 0.51
SEC23IP-205ENST00000470478 CDK19Q9BWU1 502 aa18.25■□□□□ 0.51
SEC23IP-205ENST00000470478 POLR3AO14802 1390 aaPredicted RBP18.25■□□□□ 0.51
SEC23IP-205ENST00000470478 SPATA31A5Q5VU36 1347 aa18.24■□□□□ 0.51
SEC23IP-205ENST00000470478 SPATA31A7Q8IWB4 1347 aa18.24■□□□□ 0.51
SEC23IP-205ENST00000470478 NRKQ7Z2Y5 1582 aa18.24■□□□□ 0.51
SEC23IP-205ENST00000470478 RGPD1P0DJD0 1748 aa18.23■□□□□ 0.51
SEC23IP-205ENST00000470478 TNS1Q9HBL0 1735 aaKnown RBP18.23■□□□□ 0.51
SEC23IP-205ENST00000470478 KIAA0232Q92628 1395 aa18.23■□□□□ 0.51
SEC23IP-205ENST00000470478 A0A0G2JS52 829 aa18.23■□□□□ 0.51
SEC23IP-205ENST00000470478 MYT1Q01538 1121 aa18.23■□□□□ 0.51
SEC23IP-205ENST00000470478 NBPF1Q3BBV0 1214 aa18.23■□□□□ 0.51
SEC23IP-205ENST00000470478 PRDM11Q9NQV5 511 aa18.22■□□□□ 0.51
SEC23IP-205ENST00000470478 SF3B2Q13435 895 aaKnown RBP18.21■□□□□ 0.51
SEC23IP-205ENST00000470478 FAM182BQ5T319 152 aa18.21■□□□□ 0.51
SEC23IP-205ENST00000470478 NUTM2GQ5VZR2 741 aa18.21■□□□□ 0.51
SEC23IP-205ENST00000470478 ACEP12821 1306 aa18.21■□□□□ 0.51
SEC23IP-205ENST00000470478 QRICH2Q9H0J4 1663 aa18.2■□□□□ 0.5
SEC23IP-205ENST00000470478 CHRNA2Q15822 529 aa18.2■□□□□ 0.5
SEC23IP-205ENST00000470478 LMO7Q8WWI1 1683 aa18.19■□□□□ 0.5
SEC23IP-205ENST00000470478 NBPF8Q3BBV2 869 aa18.19■□□□□ 0.5
SEC23IP-205ENST00000470478 LRP5O75197 1615 aa18.19■□□□□ 0.5
SEC23IP-205ENST00000470478 PLEKHG3A1L390 1219 aa18.18■□□□□ 0.5
SEC23IP-205ENST00000470478 CCDC61Q9Y6R9 512 aa18.18■□□□□ 0.5
SEC23IP-205ENST00000470478 SPATA31A1Q5TZJ5 1347 aa18.18■□□□□ 0.5
SEC23IP-205ENST00000470478 ZC3H6P61129 1189 aaKnown RBP18.17■□□□□ 0.5
SEC23IP-205ENST00000470478 CAMTA1Q9Y6Y1 1673 aa18.17■□□□□ 0.5
SEC23IP-205ENST00000470478 USP19O94966 1318 aa18.16■□□□□ 0.5
SEC23IP-205ENST00000470478 PPIP5K1Q6PFW1 1433 aa18.15■□□□□ 0.5
SEC23IP-205ENST00000470478 SSH2Q76I76 1423 aa18.15■□□□□ 0.5
SEC23IP-205ENST00000470478 BAG6P46379 1132 aa18.15■□□□□ 0.5
SEC23IP-205ENST00000470478 DISP2A7MBM2 1401 aa18.15■□□□□ 0.5
SEC23IP-205ENST00000470478 EN1Q05925 392 aaPredicted RBP18.14■□□□□ 0.49
SEC23IP-205ENST00000470478 STRN4Q9NRL3 753 aa18.14■□□□□ 0.49
SEC23IP-205ENST00000470478 CENPJQ9HC77 1338 aaPredicted RBP18.14■□□□□ 0.49
SEC23IP-205ENST00000470478 TRPM1Q7Z4N2 1603 aa18.13■□□□□ 0.49
SEC23IP-205ENST00000470478 PSDA5PKW4 1024 aaPredicted RBP18.13■□□□□ 0.49
SEC23IP-205ENST00000470478 CABP2Q9NPB3 220 aa18.13■□□□□ 0.49
SEC23IP-205ENST00000470478 CPDO75976 1380 aa18.13■□□□□ 0.49
SEC23IP-205ENST00000470478 SRPK2P78362 688 aaKnown RBP18.11■□□□□ 0.49
SEC23IP-205ENST00000470478 ABTB2Q8N961 1025 aa18.11■□□□□ 0.49
SEC23IP-205ENST00000470478 PIK3C2AO00443 1686 aa18.09■□□□□ 0.49
SEC23IP-205ENST00000470478 SLIT3O75094 1523 aa18.09■□□□□ 0.49
SEC23IP-205ENST00000470478 LARP1Q6PKG0 1096 aaKnown RBP18.09■□□□□ 0.49
SEC23IP-205ENST00000470478 L3MBTL2Q969R5 705 aa18.09■□□□□ 0.49
SEC23IP-205ENST00000470478 USP35Q9P2H5 1018 aa18.09■□□□□ 0.49
SEC23IP-205ENST00000470478 PARP4Q9UKK3 1724 aaKnown RBP18.09■□□□□ 0.49
SEC23IP-205ENST00000470478 RREB1Q92766 1687 aa18.09■□□□□ 0.49
SEC23IP-205ENST00000470478 COL5A2P05997 1499 aaPredicted RBP18.08■□□□□ 0.49
SEC23IP-205ENST00000470478 USP6P35125 1406 aa18.08■□□□□ 0.49
SEC23IP-205ENST00000470478 BARGINQ6ZT62 677 aa18.08■□□□□ 0.48
SEC23IP-205ENST00000470478 COL18A1P39060 1754 aa18.07■□□□□ 0.48
SEC23IP-205ENST00000470478 EZH2Q15910 746 aaKnown RBP18.07■□□□□ 0.48
SEC23IP-205ENST00000470478 TRIM37O94972 964 aa18.06■□□□□ 0.48
SEC23IP-205ENST00000470478 GCP02774 474 aa18.06■□□□□ 0.48
SEC23IP-205ENST00000470478 SIN3AQ96ST3 1273 aa18.06■□□□□ 0.48
SEC23IP-205ENST00000470478 AKAP12Q02952 1782 aa18.06■□□□□ 0.48
SEC23IP-205ENST00000470478 NUP188Q5SRE5 1749 aa18.06■□□□□ 0.48
SEC23IP-205ENST00000470478 BRD4O60885 1362 aaPredicted RBP18.05■□□□□ 0.48
SEC23IP-205ENST00000470478 EVA1CP58658 441 aa18.05■□□□□ 0.48
SEC23IP-205ENST00000470478 FAM196AQ6ZSG2 479 aa18.05■□□□□ 0.48
SEC23IP-205ENST00000470478 NLRP13Q86W25 1043 aa18.05■□□□□ 0.48
SEC23IP-205ENST00000470478 CAMKK2Q96RR4 588 aa18.05■□□□□ 0.48
SEC23IP-205ENST00000470478 CABP1Q9NZU7 370 aa18.05■□□□□ 0.48
SEC23IP-205ENST00000470478 WNK3Q9BYP7 1800 aa18.05■□□□□ 0.48
SEC23IP-205ENST00000470478 R3HDM1Q15032 1099 aaKnown RBP18.04■□□□□ 0.48
SEC23IP-205ENST00000470478 TCP11L2Q8N4U5 519 aa18.04■□□□□ 0.48
SEC23IP-205ENST00000470478 LRRC37A3O60309 1634 aa18.04■□□□□ 0.48
SEC23IP-205ENST00000470478 PEAK1Q9H792 1746 aa18.03■□□□□ 0.48
SEC23IP-205ENST00000470478 RGPD5Q99666 1765 aa18.02■□□□□ 0.47
SEC23IP-205ENST00000470478 SBF2Q86WG5 1849 aa18.01■□□□□ 0.47
SEC23IP-205ENST00000470478 CRB1P82279 1406 aa18■□□□□ 0.47
SEC23IP-205ENST00000470478 PDE3BQ13370 1112 aa18■□□□□ 0.47
SEC23IP-205ENST00000470478 AATKQ6ZMQ8 1374 aa18■□□□□ 0.47
SEC23IP-205ENST00000470478 ZBTB7CA1YPR0 619 aa17.99■□□□□ 0.47
SEC23IP-205ENST00000470478 APBA3O96018 575 aa17.99■□□□□ 0.47
SEC23IP-205ENST00000470478 NLRP6P59044 892 aa17.99■□□□□ 0.47
SEC23IP-205ENST00000470478 THRAP3Q9Y2W1 955 aaKnown RBP17.99■□□□□ 0.47
SEC23IP-205ENST00000470478 ROCK2O75116 1388 aaKnown RBP17.99■□□□□ 0.47
SEC23IP-205ENST00000470478 PARD3Q8TEW0 1356 aa17.99■□□□□ 0.47
SEC23IP-205ENST00000470478 EVC2Q86UK5 1308 aa17.98■□□□□ 0.47
SEC23IP-205ENST00000470478 MON2Q7Z3U7 1717 aa17.98■□□□□ 0.47
SEC23IP-205ENST00000470478 CPSF1Q10570 1443 aaKnown RBP17.98■□□□□ 0.47
SEC23IP-205ENST00000470478 NFAT5O94916 1531 aa17.97■□□□□ 0.47
SEC23IP-205ENST00000470478 NEUROD1Q13562 356 aa17.96■□□□□ 0.47
SEC23IP-205ENST00000470478 AXIN2Q9Y2T1 843 aa17.96■□□□□ 0.47
SEC23IP-205ENST00000470478 TTC21BQ7Z4L5 1316 aa17.96■□□□□ 0.46
SEC23IP-205ENST00000470478 RGPD3A6NKT7 1758 aaPredicted RBP17.95■□□□□ 0.46
SEC23IP-205ENST00000470478 RGPD4Q7Z3J3 1758 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms