RNA–Protein interactions for RNA: ENST00000470386.5

GTF3C3-210, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 713 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-210ENST00000470386 FDX1P10109 184 aa6.93□□□□□ -1.3
GTF3C3-210ENST00000470386 SH3BP2P78314 561 aa6.93□□□□□ -1.3
GTF3C3-210ENST00000470386 ZFP42Q96MM3 310 aa6.93□□□□□ -1.3
GTF3C3-210ENST00000470386 LAMC3Q9Y6N6 1575 aa6.93□□□□□ -1.3
GTF3C3-210ENST00000470386 PLCB2Q00722 1185 aa6.92□□□□□ -1.3
GTF3C3-210ENST00000470386 SCARF1Q14162 830 aa6.92□□□□□ -1.3
GTF3C3-210ENST00000470386 CCDC102AQ96A19 550 aa6.92□□□□□ -1.3
GTF3C3-210ENST00000470386 FAM217BQ9NTX9 383 aaPredicted RBP6.92□□□□□ -1.3
GTF3C3-210ENST00000470386 CADPSQ9ULU8 1353 aa6.92□□□□□ -1.3
GTF3C3-210ENST00000470386 PDS5BQ9NTI5 1447 aa6.92□□□□□ -1.3
GTF3C3-210ENST00000470386 CUX2O14529 1486 aa6.92□□□□□ -1.3
GTF3C3-210ENST00000470386 PTPRNQ16849 979 aa6.91□□□□□ -1.3
GTF3C3-210ENST00000470386 LINC01559Q495D7 138 aa6.91□□□□□ -1.3
GTF3C3-210ENST00000470386 UNC93B1Q9H1C4 597 aa6.91□□□□□ -1.3
GTF3C3-210ENST00000470386 TLL2Q9Y6L7 1015 aa6.91□□□□□ -1.3
GTF3C3-210ENST00000470386 TOP2AP11388 1531 aaKnown RBP6.9□□□□□ -1.31
GTF3C3-210ENST00000470386 SUPT5HO00267 1087 aaKnown RBP6.89□□□□□ -1.31
GTF3C3-210ENST00000470386 VARSP26640 1264 aaKnown RBP6.89□□□□□ -1.31
GTF3C3-210ENST00000470386 NNTQ13423 1086 aa6.89□□□□□ -1.31
GTF3C3-210ENST00000470386 MRPL14Q6P1L8 145 aaKnown RBP6.89□□□□□ -1.31
GTF3C3-210ENST00000470386 BAP1Q92560 729 aa6.89□□□□□ -1.31
GTF3C3-210ENST00000470386 ERBB4Q15303 1308 aa6.89□□□□□ -1.31
GTF3C3-210ENST00000470386 THOC2Q8NI27 1593 aaKnown RBP6.88□□□□□ -1.31
GTF3C3-210ENST00000470386 EVA1BQ9NVM1 165 aa6.88□□□□□ -1.31
GTF3C3-210ENST00000470386 ADH1CP00326 375 aa6.87□□□□□ -1.31
GTF3C3-210ENST00000470386 LORP23490 312 aaPredicted RBP6.87□□□□□ -1.31
GTF3C3-210ENST00000470386 WDR4P57081 412 aaKnown RBP6.87□□□□□ -1.31
GTF3C3-210ENST00000470386 KCNH2Q12809 1159 aa6.87□□□□□ -1.31
GTF3C3-210ENST00000470386 ZNF511Q8NB15 262 aa6.87□□□□□ -1.31
GTF3C3-210ENST00000470386 PURBQ96QR8 312 aaKnown RBP6.87□□□□□ -1.31
GTF3C3-210ENST00000470386 PCDHGC3Q9UN70 934 aa6.87□□□□□ -1.31
GTF3C3-210ENST00000470386 HAP1P54257 671 aaPredicted RBP6.86□□□□□ -1.31
GTF3C3-210ENST00000470386 MPNDQ8N594 471 aa6.86□□□□□ -1.31
GTF3C3-210ENST00000470386 FANCD2Q9BXW9 1451 aa6.85□□□□□ -1.31
GTF3C3-210ENST00000470386 CEP164Q9UPV0 1460 aa6.85□□□□□ -1.31
GTF3C3-210ENST00000470386 SPDYE5A6NIY4 337 aa6.85□□□□□ -1.31
GTF3C3-210ENST00000470386 PRR7Q8TB68 274 aa6.85□□□□□ -1.31
GTF3C3-210ENST00000470386 FAM174AQ8TBP5 190 aa6.85□□□□□ -1.31
GTF3C3-210ENST00000470386 CCDC88BA6NC98 1476 aa6.85□□□□□ -1.31
GTF3C3-210ENST00000470386 MRC2Q9UBG0 1479 aa6.85□□□□□ -1.31
GTF3C3-210ENST00000470386 TIMP2P16035 220 aa6.84□□□□□ -1.31
GTF3C3-210ENST00000470386 SSTR3P32745 418 aaPredicted RBP6.84□□□□□ -1.31
GTF3C3-210ENST00000470386 CTHP32929 405 aa6.84□□□□□ -1.31
GTF3C3-210ENST00000470386 MTMR2Q13614 643 aa6.84□□□□□ -1.31
GTF3C3-210ENST00000470386 SPIRE2Q8WWL2 714 aa6.84□□□□□ -1.31
GTF3C3-210ENST00000470386 SOBPA7XYQ1 873 aa6.83□□□□□ -1.32
GTF3C3-210ENST00000470386 MAN1A2O60476 641 aa6.83□□□□□ -1.32
GTF3C3-210ENST00000470386 NDUFV2P19404 249 aa6.83□□□□□ -1.32
GTF3C3-210ENST00000470386 ARID5BQ14865 1188 aa6.83□□□□□ -1.32
GTF3C3-210ENST00000470386 DESI1Q6ICB0 168 aa6.83□□□□□ -1.32
GTF3C3-210ENST00000470386 CFTRP13569 1480 aa6.83□□□□□ -1.32
GTF3C3-210ENST00000470386 MOXD2PA6NHM9 499 aa6.82□□□□□ -1.32
GTF3C3-210ENST00000470386 UPP2O95045 317 aa6.82□□□□□ -1.32
GTF3C3-210ENST00000470386 VSIG8P0DPA2 414 aa6.82□□□□□ -1.32
GTF3C3-210ENST00000470386 TTLL12Q14166 644 aaPredicted RBP6.82□□□□□ -1.32
GTF3C3-210ENST00000470386 AGERQ15109 404 aa6.81□□□□□ -1.32
GTF3C3-210ENST00000470386 C6orf118Q5T5N4 469 aa6.81□□□□□ -1.32
GTF3C3-210ENST00000470386 ZIC2O95409 532 aaPredicted RBP6.8□□□□□ -1.32
GTF3C3-210ENST00000470386 WDR62O43379 1518 aa6.8□□□□□ -1.32
GTF3C3-210ENST00000470386 BMP2P12643 396 aa6.79□□□□□ -1.32
GTF3C3-210ENST00000470386 NR5A1Q13285 461 aa6.79□□□□□ -1.32
GTF3C3-210ENST00000470386 URB2Q14146 1524 aaKnown RBP6.78□□□□□ -1.32
GTF3C3-210ENST00000470386 LOC100996750A0A140TA64 210 aa6.78□□□□□ -1.32
GTF3C3-210ENST00000470386 DIXDC1Q155Q3 683 aa6.78□□□□□ -1.32
GTF3C3-210ENST00000470386 CDK15Q96Q40 435 aa6.78□□□□□ -1.32
GTF3C3-210ENST00000470386 KRTAP4-6Q9BYQ5 205 aa6.78□□□□□ -1.32
GTF3C3-210ENST00000470386 ZFAND3Q9H8U3 227 aa6.78□□□□□ -1.32
GTF3C3-210ENST00000470386 PRDM2Q13029 1718 aa6.77□□□□□ -1.33
GTF3C3-210ENST00000470386 LYPD8Q6UX82 237 aa6.77□□□□□ -1.33
GTF3C3-210ENST00000470386 FOXJ1Q92949 421 aa6.77□□□□□ -1.33
GTF3C3-210ENST00000470386 ITPKCQ96DU7 683 aa6.77□□□□□ -1.33
GTF3C3-210ENST00000470386 KLF16Q9BXK1 252 aaPredicted RBP6.77□□□□□ -1.33
GTF3C3-210ENST00000470386 SPTLC1O15269 473 aa6.76□□□□□ -1.33
GTF3C3-210ENST00000470386 PPFIA3O75145 1194 aa6.76□□□□□ -1.33
GTF3C3-210ENST00000470386 KCNMA1Q12791 1236 aa6.76□□□□□ -1.33
GTF3C3-210ENST00000470386 BPHLQ86WA6 291 aaPredicted RBP6.76□□□□□ -1.33
GTF3C3-210ENST00000470386 LINC00528Q8N1L1 170 aa6.76□□□□□ -1.33
GTF3C3-210ENST00000470386 KDM2AQ9Y2K7 1162 aa6.76□□□□□ -1.33
GTF3C3-210ENST00000470386 RNF225M0QZC1 329 aaPredicted RBP6.75□□□□□ -1.33
GTF3C3-210ENST00000470386 GJA5P36382 358 aa6.75□□□□□ -1.33
GTF3C3-210ENST00000470386 BEGAINQ9BUH8 593 aa6.75□□□□□ -1.33
GTF3C3-210ENST00000470386 ZBTB3Q9H5J0 574 aa6.75□□□□□ -1.33
GTF3C3-210ENST00000470386 MAP10Q9P2G4 905 aa6.75□□□□□ -1.33
GTF3C3-210ENST00000470386 SUZ12Q15022 739 aaKnown RBP6.74□□□□□ -1.33
GTF3C3-210ENST00000470386 GIGYF2Q6Y7W6 1299 aaKnown RBP6.74□□□□□ -1.33
GTF3C3-210ENST00000470386 KCTD17Q8N5Z5 321 aa6.74□□□□□ -1.33
GTF3C3-210ENST00000470386 NR3C2P08235 984 aa6.73□□□□□ -1.33
GTF3C3-210ENST00000470386 AMHR2Q16671 573 aa6.73□□□□□ -1.33
GTF3C3-210ENST00000470386 RSBN1LQ6PCB5 846 aaPredicted RBP6.73□□□□□ -1.33
GTF3C3-210ENST00000470386 TMEM151AQ8N4L1 468 aa6.73□□□□□ -1.33
GTF3C3-210ENST00000470386 MEIOBQ8N635 442 aa6.73□□□□□ -1.33
GTF3C3-210ENST00000470386 TBC1D2Q9BYX2 928 aa6.73□□□□□ -1.33
GTF3C3-210ENST00000470386 TOPBP1Q92547 1522 aa6.72□□□□□ -1.33
GTF3C3-210ENST00000470386 CFAP99D6REC4 459 aa6.72□□□□□ -1.33
GTF3C3-210ENST00000470386 F12P00748 615 aaPredicted RBP6.72□□□□□ -1.33
GTF3C3-210ENST00000470386 HRCP23327 699 aa6.72□□□□□ -1.33
GTF3C3-210ENST00000470386 ARMC2Q8NEN0 867 aa6.72□□□□□ -1.33
GTF3C3-210ENST00000470386 TSC1Q92574 1164 aa6.72□□□□□ -1.33
GTF3C3-210ENST00000470386 TSEN34Q9BSV6 310 aaKnown RBP6.72□□□□□ -1.33
GTF3C3-210ENST00000470386 GDF11O95390 407 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms