RNA–Protein interactions for RNA: ENST00000470363.5

HLA-C-206, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,279 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-206ENST00000470363 POLR3AO14802 1390 aaPredicted RBP16.67■□□□□ 0.26
HLA-C-206ENST00000470363 CCDC61Q9Y6R9 512 aa16.67■□□□□ 0.26
HLA-C-206ENST00000470363 PLCH1Q4KWH8 1693 aa16.66■□□□□ 0.26
HLA-C-206ENST00000470363 BTG4Q9NY30 223 aa16.66■□□□□ 0.26
HLA-C-206ENST00000470363 KIAA1210Q9ULL0 1709 aa16.66■□□□□ 0.26
HLA-C-206ENST00000470363 NBPF8Q3BBV2 869 aa16.65■□□□□ 0.26
HLA-C-206ENST00000470363 CRYBG1Q9Y4K1 1723 aa16.64■□□□□ 0.25
HLA-C-206ENST00000470363 ACEP12821 1306 aa16.64■□□□□ 0.25
HLA-C-206ENST00000470363 BLMP54132 1417 aaPredicted RBP16.63■□□□□ 0.25
HLA-C-206ENST00000470363 PAK3O75914 559 aaPredicted RBP16.63■□□□□ 0.25
HLA-C-206ENST00000470363 L3MBTL2Q969R5 705 aa16.63■□□□□ 0.25
HLA-C-206ENST00000470363 NRAPQ86VF7 1730 aa16.62■□□□□ 0.25
HLA-C-206ENST00000470363 BRWD3Q6RI45 1802 aa16.62■□□□□ 0.25
HLA-C-206ENST00000470363 KRT27Q7Z3Y8 459 aa16.62■□□□□ 0.25
HLA-C-206ENST00000470363 SPATA31A5Q5VU36 1347 aa16.62■□□□□ 0.25
HLA-C-206ENST00000470363 SPATA31A7Q8IWB4 1347 aa16.62■□□□□ 0.25
HLA-C-206ENST00000470363 CCDC9Q9Y3X0 531 aaKnown RBP16.61■□□□□ 0.25
HLA-C-206ENST00000470363 COL14A1Q05707 1796 aaKnown RBP16.61■□□□□ 0.25
HLA-C-206ENST00000470363 FAM98CQ17RN3 349 aaKnown RBP16.6■□□□□ 0.25
HLA-C-206ENST00000470363 SIN3AQ96ST3 1273 aa16.6■□□□□ 0.25
HLA-C-206ENST00000470363 TOPAZ1Q8N9V7 1692 aa16.59■□□□□ 0.25
HLA-C-206ENST00000470363 DEFB132Q7Z7B7 95 aa16.59■□□□□ 0.25
HLA-C-206ENST00000470363 ZRANB1Q9UGI0 708 aa16.59■□□□□ 0.25
HLA-C-206ENST00000470363 CENPJQ9HC77 1338 aaPredicted RBP16.59■□□□□ 0.25
HLA-C-206ENST00000470363 KIAA0232Q92628 1395 aa16.59■□□□□ 0.25
HLA-C-206ENST00000470363 NUTM2GQ5VZR2 741 aa16.58■□□□□ 0.24
HLA-C-206ENST00000470363 PRDM11Q9NQV5 511 aa16.58■□□□□ 0.24
HLA-C-206ENST00000470363 ITSN1Q15811 1721 aa16.58■□□□□ 0.24
HLA-C-206ENST00000470363 USP19O94966 1318 aa16.57■□□□□ 0.24
HLA-C-206ENST00000470363 CABP2Q9NPB3 220 aa16.57■□□□□ 0.24
HLA-C-206ENST00000470363 SPATA31A1Q5TZJ5 1347 aa16.56■□□□□ 0.24
HLA-C-206ENST00000470363 ZC3H6P61129 1189 aaKnown RBP16.56■□□□□ 0.24
HLA-C-206ENST00000470363 CHRNA2Q15822 529 aa16.56■□□□□ 0.24
HLA-C-206ENST00000470363 ABTB2Q8N961 1025 aa16.55■□□□□ 0.24
HLA-C-206ENST00000470363 PPIP5K1Q6PFW1 1433 aa16.54■□□□□ 0.24
HLA-C-206ENST00000470363 CPDO75976 1380 aa16.54■□□□□ 0.24
HLA-C-206ENST00000470363 SRPK2P78362 688 aaKnown RBP16.54■□□□□ 0.24
HLA-C-206ENST00000470363 SSH2Q76I76 1423 aa16.53■□□□□ 0.24
HLA-C-206ENST00000470363 THSD7AQ9UPZ6 1657 aa16.53■□□□□ 0.24
HLA-C-206ENST00000470363 NEUROD1Q13562 356 aa16.53■□□□□ 0.24
HLA-C-206ENST00000470363 CABP1Q9NZU7 370 aa16.53■□□□□ 0.24
HLA-C-206ENST00000470363 BRD4O60885 1362 aaPredicted RBP16.52■□□□□ 0.24
HLA-C-206ENST00000470363 PHRF1Q9P1Y6 1649 aaKnown RBP16.52■□□□□ 0.24
HLA-C-206ENST00000470363 CLSPNQ9HAW4 1339 aa16.52■□□□□ 0.24
HLA-C-206ENST00000470363 GCP02774 474 aa16.52■□□□□ 0.24
HLA-C-206ENST00000470363 CAMTA1Q9Y6Y1 1673 aa16.51■□□□□ 0.23
HLA-C-206ENST00000470363 FAM182BQ5T319 152 aa16.51■□□□□ 0.23
HLA-C-206ENST00000470363 NLRP13Q86W25 1043 aa16.51■□□□□ 0.23
HLA-C-206ENST00000470363 SF3B2Q13435 895 aaKnown RBP16.5■□□□□ 0.23
HLA-C-206ENST00000470363 BARGINQ6ZT62 677 aa16.5■□□□□ 0.23
HLA-C-206ENST00000470363 USP6P35125 1406 aa16.5■□□□□ 0.23
HLA-C-206ENST00000470363 NRKQ7Z2Y5 1582 aa16.5■□□□□ 0.23
HLA-C-206ENST00000470363 A0A0G2JS52 829 aa16.49■□□□□ 0.23
HLA-C-206ENST00000470363 MYT1Q01538 1121 aa16.49■□□□□ 0.23
HLA-C-206ENST00000470363 LARP1Q6PKG0 1096 aaKnown RBP16.49■□□□□ 0.23
HLA-C-206ENST00000470363 STRN4Q9NRL3 753 aa16.49■□□□□ 0.23
HLA-C-206ENST00000470363 TRPM1Q7Z4N2 1603 aa16.48■□□□□ 0.23
HLA-C-206ENST00000470363 LMO7Q8WWI1 1683 aa16.48■□□□□ 0.23
HLA-C-206ENST00000470363 EVC2Q86UK5 1308 aa16.47■□□□□ 0.23
HLA-C-206ENST00000470363 QRICH2Q9H0J4 1663 aa16.47■□□□□ 0.23
HLA-C-206ENST00000470363 DISP2A7MBM2 1401 aa16.46■□□□□ 0.23
HLA-C-206ENST00000470363 BAG6P46379 1132 aa16.46■□□□□ 0.23
HLA-C-206ENST00000470363 EVA1CP58658 441 aa16.46■□□□□ 0.23
HLA-C-206ENST00000470363 ROCK2O75116 1388 aaKnown RBP16.46■□□□□ 0.23
HLA-C-206ENST00000470363 EN1Q05925 392 aaPredicted RBP16.45■□□□□ 0.22
HLA-C-206ENST00000470363 TCP11L2Q8N4U5 519 aa16.45■□□□□ 0.22
HLA-C-206ENST00000470363 AATKQ6ZMQ8 1374 aa16.44■□□□□ 0.22
HLA-C-206ENST00000470363 ZEB1P37275 1124 aaPredicted RBP16.44■□□□□ 0.22
HLA-C-206ENST00000470363 NLRP6P59044 892 aa16.44■□□□□ 0.22
HLA-C-206ENST00000470363 FAM196AQ6ZSG2 479 aa16.44■□□□□ 0.22
HLA-C-206ENST00000470363 ZNF692Q9BU19 519 aaPredicted RBP16.44■□□□□ 0.22
HLA-C-206ENST00000470363 USP35Q9P2H5 1018 aa16.44■□□□□ 0.22
HLA-C-206ENST00000470363 THRAP3Q9Y2W1 955 aaKnown RBP16.44■□□□□ 0.22
HLA-C-206ENST00000470363 SLIT3O75094 1523 aa16.44■□□□□ 0.22
HLA-C-206ENST00000470363 CPSF1Q10570 1443 aaKnown RBP16.44■□□□□ 0.22
HLA-C-206ENST00000470363 COL5A2P05997 1499 aaPredicted RBP16.43■□□□□ 0.22
HLA-C-206ENST00000470363 CAMKK2Q96RR4 588 aa16.43■□□□□ 0.22
HLA-C-206ENST00000470363 TTC21BQ7Z4L5 1316 aa16.43■□□□□ 0.22
HLA-C-206ENST00000470363 AXIN2Q9Y2T1 843 aa16.42■□□□□ 0.22
HLA-C-206ENST00000470363 SBNO2Q9Y2G9 1366 aa16.41■□□□□ 0.22
HLA-C-206ENST00000470363 TRIM37O94972 964 aa16.41■□□□□ 0.22
HLA-C-206ENST00000470363 EZH2Q15910 746 aaKnown RBP16.4■□□□□ 0.22
HLA-C-206ENST00000470363 ARHGEF25Q86VW2 580 aa16.4■□□□□ 0.22
HLA-C-206ENST00000470363 PIK3C2AO00443 1686 aa16.4■□□□□ 0.22
HLA-C-206ENST00000470363 RGPD1P0DJD0 1748 aa16.39■□□□□ 0.21
HLA-C-206ENST00000470363 TNS1Q9HBL0 1735 aaKnown RBP16.39■□□□□ 0.21
HLA-C-206ENST00000470363 COL18A1P39060 1754 aa16.38■□□□□ 0.21
HLA-C-206ENST00000470363 CRB1P82279 1406 aa16.38■□□□□ 0.21
HLA-C-206ENST00000470363 PSDA5PKW4 1024 aaPredicted RBP16.38■□□□□ 0.21
HLA-C-206ENST00000470363 PDE3BQ13370 1112 aa16.38■□□□□ 0.21
HLA-C-206ENST00000470363 TTC21AQ8NDW8 1320 aa16.38■□□□□ 0.21
HLA-C-206ENST00000470363 CD163L1Q9NR16 1453 aa16.36■□□□□ 0.21
HLA-C-206ENST00000470363 KCNH5Q8NCM2 988 aa16.36■□□□□ 0.21
HLA-C-206ENST00000470363 CARD11Q9BXL7 1154 aa16.36■□□□□ 0.21
HLA-C-206ENST00000470363 TONSLQ96HA7 1378 aa16.36■□□□□ 0.21
HLA-C-206ENST00000470363 APBA3O96018 575 aa16.35■□□□□ 0.21
HLA-C-206ENST00000470363 WDR17Q8IZU2 1322 aa16.35■□□□□ 0.21
HLA-C-206ENST00000470363 USP31Q70CQ4 1352 aa16.34■□□□□ 0.21
HLA-C-206ENST00000470363 KTN1Q86UP2 1357 aaKnown RBP16.34■□□□□ 0.21
HLA-C-206ENST00000470363 PARD3Q8TEW0 1356 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms