RNA–Protein interactions for RNA: ENST00000470359.2

SUPT20H-208, Transcript of SPT20 homolog, SAGA complex component, humanhuman

TSL 5

Gene SUPT20H, Length 792 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-208ENST00000470359 PHRF1Q9P1Y6 1649 aaKnown RBP28.62■■■□□ 2.17
SUPT20H-208ENST00000470359 NUDT16Q96DE0 195 aaKnown RBP28.62■■■□□ 2.17
SUPT20H-208ENST00000470359 BTG4Q9NY30 223 aa28.62■■■□□ 2.17
SUPT20H-208ENST00000470359 BLMP54132 1417 aaPredicted RBP28.61■■■□□ 2.17
SUPT20H-208ENST00000470359 PAK3O75914 559 aaPredicted RBP28.61■■■□□ 2.17
SUPT20H-208ENST00000470359 NBPF1Q3BBV0 1214 aa28.61■■■□□ 2.17
SUPT20H-208ENST00000470359 ONECUT3O60422 494 aaPredicted RBP28.6■■■□□ 2.17
SUPT20H-208ENST00000470359 DEFB132Q7Z7B7 95 aa28.6■■■□□ 2.17
SUPT20H-208ENST00000470359 CCDC125Q86Z20 511 aa28.59■■■□□ 2.17
SUPT20H-208ENST00000470359 CDK19Q9BWU1 502 aa28.59■■■□□ 2.17
SUPT20H-208ENST00000470359 FAM98CQ17RN3 349 aaKnown RBP28.57■■■□□ 2.16
SUPT20H-208ENST00000470359 KRT27Q7Z3Y8 459 aa28.56■■■□□ 2.16
SUPT20H-208ENST00000470359 NUTM2GQ5VZR2 741 aa28.55■■■□□ 2.16
SUPT20H-208ENST00000470359 ZRANB1Q9UGI0 708 aa28.55■■■□□ 2.16
SUPT20H-208ENST00000470359 A0A0G2JS52 829 aa28.53■■■□□ 2.16
SUPT20H-208ENST00000470359 MYT1Q01538 1121 aa28.53■■■□□ 2.16
SUPT20H-208ENST00000470359 THSD7AQ9UPZ6 1657 aa28.53■■■□□ 2.16
SUPT20H-208ENST00000470359 POLR3AO14802 1390 aaPredicted RBP28.52■■■□□ 2.16
SUPT20H-208ENST00000470359 KIAA0232Q92628 1395 aa28.52■■■□□ 2.16
SUPT20H-208ENST00000470359 ACEP12821 1306 aa28.51■■■□□ 2.15
SUPT20H-208ENST00000470359 CHRNA2Q15822 529 aa28.51■■■□□ 2.15
SUPT20H-208ENST00000470359 PRDM11Q9NQV5 511 aa28.51■■■□□ 2.15
SUPT20H-208ENST00000470359 SPATA31A5Q5VU36 1347 aa28.5■■■□□ 2.15
SUPT20H-208ENST00000470359 SPATA31A7Q8IWB4 1347 aa28.5■■■□□ 2.15
SUPT20H-208ENST00000470359 FAM182BQ5T319 152 aa28.5■■■□□ 2.15
SUPT20H-208ENST00000470359 QRICH2Q9H0J4 1663 aa28.5■■■□□ 2.15
SUPT20H-208ENST00000470359 NRKQ7Z2Y5 1582 aa28.5■■■□□ 2.15
SUPT20H-208ENST00000470359 NBPF8Q3BBV2 869 aa28.47■■■□□ 2.15
SUPT20H-208ENST00000470359 ZC3H6P61129 1189 aaKnown RBP28.46■■■□□ 2.15
SUPT20H-208ENST00000470359 CCDC61Q9Y6R9 512 aa28.46■■■□□ 2.15
SUPT20H-208ENST00000470359 PLEKHG3A1L390 1219 aa28.44■■■□□ 2.14
SUPT20H-208ENST00000470359 CABP2Q9NPB3 220 aa28.43■■■□□ 2.14
SUPT20H-208ENST00000470359 PPIP5K1Q6PFW1 1433 aa28.43■■■□□ 2.14
SUPT20H-208ENST00000470359 CENPJQ9HC77 1338 aaPredicted RBP28.43■■■□□ 2.14
SUPT20H-208ENST00000470359 SF3B2Q13435 895 aaKnown RBP28.42■■■□□ 2.14
SUPT20H-208ENST00000470359 STRN4Q9NRL3 753 aa28.42■■■□□ 2.14
SUPT20H-208ENST00000470359 TNS1Q9HBL0 1735 aaKnown RBP28.42■■■□□ 2.14
SUPT20H-208ENST00000470359 L3MBTL2Q969R5 705 aa28.41■■■□□ 2.14
SUPT20H-208ENST00000470359 LMO7Q8WWI1 1683 aa28.41■■■□□ 2.14
SUPT20H-208ENST00000470359 SPATA31A1Q5TZJ5 1347 aa28.41■■■□□ 2.14
SUPT20H-208ENST00000470359 RGPD1P0DJD0 1748 aa28.4■■■□□ 2.14
SUPT20H-208ENST00000470359 TRPM1Q7Z4N2 1603 aa28.4■■■□□ 2.14
SUPT20H-208ENST00000470359 CAMTA1Q9Y6Y1 1673 aa28.4■■■□□ 2.14
SUPT20H-208ENST00000470359 SRPK2P78362 688 aaKnown RBP28.4■■■□□ 2.14
SUPT20H-208ENST00000470359 SIN3AQ96ST3 1273 aa28.4■■■□□ 2.14
SUPT20H-208ENST00000470359 USP19O94966 1318 aa28.38■■■□□ 2.13
SUPT20H-208ENST00000470359 SSH2Q76I76 1423 aa28.36■■■□□ 2.13
SUPT20H-208ENST00000470359 ABTB2Q8N961 1025 aa28.36■■■□□ 2.13
SUPT20H-208ENST00000470359 USP35Q9P2H5 1018 aa28.34■■■□□ 2.13
SUPT20H-208ENST00000470359 EN1Q05925 392 aaPredicted RBP28.33■■■□□ 2.13
SUPT20H-208ENST00000470359 PSDA5PKW4 1024 aaPredicted RBP28.32■■■□□ 2.12
SUPT20H-208ENST00000470359 BAG6P46379 1132 aa28.31■■■□□ 2.12
SUPT20H-208ENST00000470359 LARP1Q6PKG0 1096 aaKnown RBP28.31■■■□□ 2.12
SUPT20H-208ENST00000470359 CPDO75976 1380 aa28.31■■■□□ 2.12
SUPT20H-208ENST00000470359 PIK3C2AO00443 1686 aa28.3■■■□□ 2.12
SUPT20H-208ENST00000470359 USP6P35125 1406 aa28.3■■■□□ 2.12
SUPT20H-208ENST00000470359 CABP1Q9NZU7 370 aa28.3■■■□□ 2.12
SUPT20H-208ENST00000470359 NEUROD1Q13562 356 aa28.28■■■□□ 2.12
SUPT20H-208ENST00000470359 GCP02774 474 aa28.27■■■□□ 2.12
SUPT20H-208ENST00000470359 LRP5O75197 1615 aa28.27■■■□□ 2.12
SUPT20H-208ENST00000470359 COL5A2P05997 1499 aaPredicted RBP28.27■■■□□ 2.12
SUPT20H-208ENST00000470359 SLIT3O75094 1523 aa28.26■■■□□ 2.11
SUPT20H-208ENST00000470359 DISP2A7MBM2 1401 aa28.26■■■□□ 2.11
SUPT20H-208ENST00000470359 EVA1CP58658 441 aa28.25■■■□□ 2.11
SUPT20H-208ENST00000470359 TRIM37O94972 964 aa28.24■■■□□ 2.11
SUPT20H-208ENST00000470359 NLRP13Q86W25 1043 aa28.24■■■□□ 2.11
SUPT20H-208ENST00000470359 AKAP12Q02952 1782 aa28.23■■■□□ 2.11
SUPT20H-208ENST00000470359 ROCK2O75116 1388 aaKnown RBP28.23■■■□□ 2.11
SUPT20H-208ENST00000470359 COL18A1P39060 1754 aa28.22■■■□□ 2.11
SUPT20H-208ENST00000470359 ZBTB7CA1YPR0 619 aa28.22■■■□□ 2.11
SUPT20H-208ENST00000470359 EZH2Q15910 746 aaKnown RBP28.22■■■□□ 2.11
SUPT20H-208ENST00000470359 BARGINQ6ZT62 677 aa28.22■■■□□ 2.11
SUPT20H-208ENST00000470359 PARP4Q9UKK3 1724 aaKnown RBP28.21■■■□□ 2.11
SUPT20H-208ENST00000470359 TCP11L2Q8N4U5 519 aa28.2■■■□□ 2.1
SUPT20H-208ENST00000470359 NLRP6P59044 892 aa28.19■■■□□ 2.1
SUPT20H-208ENST00000470359 BRD4O60885 1362 aaPredicted RBP28.19■■■□□ 2.1
SUPT20H-208ENST00000470359 EVC2Q86UK5 1308 aa28.18■■■□□ 2.1
SUPT20H-208ENST00000470359 FAM196AQ6ZSG2 479 aa28.18■■■□□ 2.1
SUPT20H-208ENST00000470359 R3HDM1Q15032 1099 aaKnown RBP28.17■■■□□ 2.1
SUPT20H-208ENST00000470359 RGPD5Q99666 1765 aa28.16■■■□□ 2.1
SUPT20H-208ENST00000470359 RREB1Q92766 1687 aa28.16■■■□□ 2.1
SUPT20H-208ENST00000470359 CAMKK2Q96RR4 588 aa28.16■■■□□ 2.1
SUPT20H-208ENST00000470359 LRRC37A3O60309 1634 aa28.16■■■□□ 2.1
SUPT20H-208ENST00000470359 WNK3Q9BYP7 1800 aa28.15■■■□□ 2.1
SUPT20H-208ENST00000470359 NUP188Q5SRE5 1749 aa28.15■■■□□ 2.1
SUPT20H-208ENST00000470359 PDE3BQ13370 1112 aa28.14■■■□□ 2.1
SUPT20H-208ENST00000470359 CRB1P82279 1406 aa28.14■■■□□ 2.1
SUPT20H-208ENST00000470359 PEAK1Q9H792 1746 aa28.14■■■□□ 2.1
SUPT20H-208ENST00000470359 AATKQ6ZMQ8 1374 aa28.13■■■□□ 2.09
SUPT20H-208ENST00000470359 TTC21BQ7Z4L5 1316 aa28.13■■■□□ 2.09
SUPT20H-208ENST00000470359 APBA3O96018 575 aa28.12■■■□□ 2.09
SUPT20H-208ENST00000470359 AXIN2Q9Y2T1 843 aa28.12■■■□□ 2.09
SUPT20H-208ENST00000470359 MON2Q7Z3U7 1717 aa28.11■■■□□ 2.09
SUPT20H-208ENST00000470359 CPSF1Q10570 1443 aaKnown RBP28.1■■■□□ 2.09
SUPT20H-208ENST00000470359 SOX12O15370 315 aa28.1■■■□□ 2.09
SUPT20H-208ENST00000470359 NFAT5O94916 1531 aa28.09■■■□□ 2.09
SUPT20H-208ENST00000470359 THRAP3Q9Y2W1 955 aaKnown RBP28.09■■■□□ 2.09
SUPT20H-208ENST00000470359 SBF2Q86WG5 1849 aa28.08■■■□□ 2.09
SUPT20H-208ENST00000470359 CD163L1Q9NR16 1453 aa28.05■■■□□ 2.08
SUPT20H-208ENST00000470359 ARHGEF25Q86VW2 580 aa28.04■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms