RNA–Protein interactions for RNA: ENST00000470338.1

TOP3B-215, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 624 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-215ENST00000470338 QTRT2Q9H974 415 aaKnown RBP20.03■□□□□ 0.8
TOP3B-215ENST00000470338 USP21Q9UK80 565 aa20.03■□□□□ 0.8
TOP3B-215ENST00000470338 RXRBP28702 533 aa20.02■□□□□ 0.8
TOP3B-215ENST00000470338 BCL9LQ86UU0 1499 aa20.01■□□□□ 0.79
TOP3B-215ENST00000470338 BRD4O60885 1362 aaPredicted RBP20.01■□□□□ 0.79
TOP3B-215ENST00000470338 HAP1P54257 671 aaPredicted RBP20.01■□□□□ 0.79
TOP3B-215ENST00000470338 ATAD2Q6PL18 1390 aa20■□□□□ 0.79
TOP3B-215ENST00000470338 TNKS1BP1Q9C0C2 1729 aaKnown RBP20■□□□□ 0.79
TOP3B-215ENST00000470338 AKAP12Q02952 1782 aa20■□□□□ 0.79
TOP3B-215ENST00000470338 SLIT2O94813 1529 aa19.99■□□□□ 0.79
TOP3B-215ENST00000470338 ST20-MTHFSA0A0A6YYL1 179 aa19.99■□□□□ 0.79
TOP3B-215ENST00000470338 PLEKHG5O94827 1062 aa19.99■□□□□ 0.79
TOP3B-215ENST00000470338 TESK2Q96S53 571 aa19.99■□□□□ 0.79
TOP3B-215ENST00000470338 RBM6P78332 1123 aaKnown RBP19.98■□□□□ 0.79
TOP3B-215ENST00000470338 TRPC5Q9UL62 973 aaPredicted RBP19.98■□□□□ 0.79
TOP3B-215ENST00000470338 NWD2Q9ULI1 1742 aa19.98■□□□□ 0.79
TOP3B-215ENST00000470338 CDK12Q9NYV4 1490 aaPredicted RBP19.98■□□□□ 0.79
TOP3B-215ENST00000470338 PLCH1Q4KWH8 1693 aa19.97■□□□□ 0.79
TOP3B-215ENST00000470338 ATRNO75882 1429 aa19.97■□□□□ 0.79
TOP3B-215ENST00000470338 USP6P35125 1406 aa19.97■□□□□ 0.79
TOP3B-215ENST00000470338 PUS7Q96PZ0 661 aaKnown RBP19.97■□□□□ 0.79
TOP3B-215ENST00000470338 SSH2Q76I76 1423 aa19.96■□□□□ 0.79
TOP3B-215ENST00000470338 PHRF1Q9P1Y6 1649 aaKnown RBP19.96■□□□□ 0.79
TOP3B-215ENST00000470338 SLC24A1O60721 1099 aa19.96■□□□□ 0.79
TOP3B-215ENST00000470338 ZNF692Q9BU19 519 aaPredicted RBP19.96■□□□□ 0.79
TOP3B-215ENST00000470338 FAM83GA6ND36 823 aa19.95■□□□□ 0.78
TOP3B-215ENST00000470338 UNC5CLQ8IV45 518 aa19.95■□□□□ 0.78
TOP3B-215ENST00000470338 ABTB2Q8N961 1025 aa19.95■□□□□ 0.78
TOP3B-215ENST00000470338 USP47Q96K76 1375 aa19.95■□□□□ 0.78
TOP3B-215ENST00000470338 CPSF1Q10570 1443 aaKnown RBP19.94■□□□□ 0.78
TOP3B-215ENST00000470338 COL14A1Q05707 1796 aaKnown RBP19.94■□□□□ 0.78
TOP3B-215ENST00000470338 NUTM2GQ5VZR2 741 aa19.93■□□□□ 0.78
TOP3B-215ENST00000470338 MON2Q7Z3U7 1717 aa19.92■□□□□ 0.78
TOP3B-215ENST00000470338 NLRP13Q86W25 1043 aa19.91■□□□□ 0.78
TOP3B-215ENST00000470338 USP19O94966 1318 aa19.91■□□□□ 0.78
TOP3B-215ENST00000470338 GJD4Q96KN9 370 aaPredicted RBP19.9■□□□□ 0.78
TOP3B-215ENST00000470338 CD163L1Q9NR16 1453 aa19.9■□□□□ 0.78
TOP3B-215ENST00000470338 NRKQ7Z2Y5 1582 aa19.9■□□□□ 0.78
TOP3B-215ENST00000470338 PIK3C2AO00443 1686 aa19.9■□□□□ 0.78
TOP3B-215ENST00000470338 NRAPQ86VF7 1730 aa19.9■□□□□ 0.78
TOP3B-215ENST00000470338 RGS12O14924 1447 aa19.89■□□□□ 0.77
TOP3B-215ENST00000470338 TTC21BQ7Z4L5 1316 aa19.89■□□□□ 0.77
TOP3B-215ENST00000470338 KTN1Q86UP2 1357 aaKnown RBP19.89■□□□□ 0.77
TOP3B-215ENST00000470338 SLC12A5Q9H2X9 1139 aa19.89■□□□□ 0.77
TOP3B-215ENST00000470338 GLI3P10071 1580 aa19.87■□□□□ 0.77
TOP3B-215ENST00000470338 KIAA0232Q92628 1395 aa19.87■□□□□ 0.77
TOP3B-215ENST00000470338 TTC21AQ8NDW8 1320 aa19.87■□□□□ 0.77
TOP3B-215ENST00000470338 NLRP6P59044 892 aa19.87■□□□□ 0.77
TOP3B-215ENST00000470338 VPS72Q15906 364 aa19.87■□□□□ 0.77
TOP3B-215ENST00000470338 TMC1Q8TDI8 760 aa19.87■□□□□ 0.77
TOP3B-215ENST00000470338 PRDM11Q9NQV5 511 aa19.87■□□□□ 0.77
TOP3B-215ENST00000470338 BTG4Q9NY30 223 aa19.87■□□□□ 0.77
TOP3B-215ENST00000470338 GCP02774 474 aa19.86■□□□□ 0.77
TOP3B-215ENST00000470338 ZC3H6P61129 1189 aaKnown RBP19.86■□□□□ 0.77
TOP3B-215ENST00000470338 TMF1P82094 1093 aa19.86■□□□□ 0.77
TOP3B-215ENST00000470338 CPDO75976 1380 aa19.85■□□□□ 0.77
TOP3B-215ENST00000470338 NINLQ9Y2I6 1382 aa19.85■□□□□ 0.77
TOP3B-215ENST00000470338 SLIT3O75094 1523 aa19.85■□□□□ 0.77
TOP3B-215ENST00000470338 HDGFL2Q7Z4V5 671 aaPredicted RBP19.84■□□□□ 0.77
TOP3B-215ENST00000470338 TERF2IPQ9NYB0 399 aa19.84■□□□□ 0.77
TOP3B-215ENST00000470338 CHRNA2Q15822 529 aa19.83■□□□□ 0.77
TOP3B-215ENST00000470338 A0A1W2PP64 1363 aa19.82■□□□□ 0.76
TOP3B-215ENST00000470338 USP54Q70EL1 1684 aa19.81■□□□□ 0.76
TOP3B-215ENST00000470338 LMO7Q8WWI1 1683 aa19.81■□□□□ 0.76
TOP3B-215ENST00000470338 EDC4Q6P2E9 1401 aaKnown RBP19.8■□□□□ 0.76
TOP3B-215ENST00000470338 ONECUT3O60422 494 aaPredicted RBP19.8■□□□□ 0.76
TOP3B-215ENST00000470338 CDCA8Q53HL2 280 aa19.8■□□□□ 0.76
TOP3B-215ENST00000470338 USP31Q70CQ4 1352 aa19.8■□□□□ 0.76
TOP3B-215ENST00000470338 BRWD3Q6RI45 1802 aa19.79■□□□□ 0.76
TOP3B-215ENST00000470338 CAMTA1Q9Y6Y1 1673 aa19.79■□□□□ 0.76
TOP3B-215ENST00000470338 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.79■□□□□ 0.76
TOP3B-215ENST00000470338 CCDC9Q9Y3X0 531 aaKnown RBP19.79■□□□□ 0.76
TOP3B-215ENST00000470338 COL18A1P39060 1754 aa19.78■□□□□ 0.76
TOP3B-215ENST00000470338 SPATA31A5Q5VU36 1347 aa19.77■□□□□ 0.76
TOP3B-215ENST00000470338 SPATA31A7Q8IWB4 1347 aa19.77■□□□□ 0.76
TOP3B-215ENST00000470338 EIF4G2P78344 907 aaKnown RBP eCLIP19.77■□□□□ 0.76
TOP3B-215ENST00000470338 KCNH5Q8NCM2 988 aa19.77■□□□□ 0.76
TOP3B-215ENST00000470338 UPF1Q92900 1129 aaKnown RBP eCLIP19.77■□□□□ 0.76
TOP3B-215ENST00000470338 NME9Q86XW9 330 aa19.76■□□□□ 0.75
TOP3B-215ENST00000470338 ZRANB1Q9UGI0 708 aa19.76■□□□□ 0.75
TOP3B-215ENST00000470338 AATKQ6ZMQ8 1374 aa19.75■□□□□ 0.75
TOP3B-215ENST00000470338 ANKRD36BQ8N2N9 1353 aa19.75■□□□□ 0.75
TOP3B-215ENST00000470338 NFAT5O94916 1531 aa19.75■□□□□ 0.75
TOP3B-215ENST00000470338 MYOM1P52179 1685 aa19.75■□□□□ 0.75
TOP3B-215ENST00000470338 HSPA5P11021 654 aaKnown RBP19.74■□□□□ 0.75
TOP3B-215ENST00000470338 ARHGEF25Q86VW2 580 aa19.74■□□□□ 0.75
TOP3B-215ENST00000470338 SEPT12Q8IYM1 358 aa19.74■□□□□ 0.75
TOP3B-215ENST00000470338 STRN4Q9NRL3 753 aa19.74■□□□□ 0.75
TOP3B-215ENST00000470338 RGPD5Q99666 1765 aa19.74■□□□□ 0.75
TOP3B-215ENST00000470338 EVA1CP58658 441 aa19.73■□□□□ 0.75
TOP3B-215ENST00000470338 SPATA31A1Q5TZJ5 1347 aa19.73■□□□□ 0.75
TOP3B-215ENST00000470338 EP400Q96L91 3159 aa19.73■□□□□ 0.75
TOP3B-215ENST00000470338 FAM98CQ17RN3 349 aaKnown RBP19.71■□□□□ 0.75
TOP3B-215ENST00000470338 COL5A2P05997 1499 aaPredicted RBP19.71■□□□□ 0.75
TOP3B-215ENST00000470338 OVOS2A0A0J9YW53 1432 aa19.7■□□□□ 0.74
TOP3B-215ENST00000470338 OVOS2Q6IE36 1432 aa19.7■□□□□ 0.74
TOP3B-215ENST00000470338 LARP1Q6PKG0 1096 aaKnown RBP19.7■□□□□ 0.74
TOP3B-215ENST00000470338 THSD7AQ9UPZ6 1657 aa19.7■□□□□ 0.74
TOP3B-215ENST00000470338 LTN1O94822 1766 aa19.7■□□□□ 0.74
TOP3B-215ENST00000470338 ZBTB7CA1YPR0 619 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms