RNA–Protein interactions for RNA: ENST00000470241.2

SMC1A-206, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 838 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-206ENST00000470241 TTC21BQ7Z4L5 1316 aa14.61□□□□□ -0.07
SMC1A-206ENST00000470241 TNS3Q68CZ2 1445 aa14.6□□□□□ -0.07
SMC1A-206ENST00000470241 PANK3Q9H999 370 aa14.6□□□□□ -0.07
SMC1A-206ENST00000470241 TRPM3Q9HCF6 1732 aaPredicted RBP14.6□□□□□ -0.07
SMC1A-206ENST00000470241 ZNF316A6NFI3 1004 aaPredicted RBP14.59□□□□□ -0.07
SMC1A-206ENST00000470241 PAK3O75914 559 aaPredicted RBP14.59□□□□□ -0.07
SMC1A-206ENST00000470241 AKAP12Q02952 1782 aa14.59□□□□□ -0.07
SMC1A-206ENST00000470241 JCADQ9P266 1359 aa14.59□□□□□ -0.07
SMC1A-206ENST00000470241 EDC4Q6P2E9 1401 aaKnown RBP14.58□□□□□ -0.07
SMC1A-206ENST00000470241 PNPLA6Q8IY17 1366 aa14.58□□□□□ -0.08
SMC1A-206ENST00000470241 MON2Q7Z3U7 1717 aa14.58□□□□□ -0.08
SMC1A-206ENST00000470241 NRKQ7Z2Y5 1582 aa14.57□□□□□ -0.08
SMC1A-206ENST00000470241 LMOD2Q6P5Q4 547 aa14.57□□□□□ -0.08
SMC1A-206ENST00000470241 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.57□□□□□ -0.08
SMC1A-206ENST00000470241 TTC21AQ8NDW8 1320 aa14.57□□□□□ -0.08
SMC1A-206ENST00000470241 NSD3Q9BZ95 1437 aa14.57□□□□□ -0.08
SMC1A-206ENST00000470241 ABTB2Q8N961 1025 aa14.56□□□□□ -0.08
SMC1A-206ENST00000470241 ARHGEF10O15013 1369 aa14.56□□□□□ -0.08
SMC1A-206ENST00000470241 NUTM2GQ5VZR2 741 aa14.55□□□□□ -0.08
SMC1A-206ENST00000470241 NME9Q86XW9 330 aa14.55□□□□□ -0.08
SMC1A-206ENST00000470241 ALS2Q96Q42 1657 aa14.55□□□□□ -0.08
SMC1A-206ENST00000470241 PER1O15534 1290 aaPredicted RBP14.54□□□□□ -0.08
SMC1A-206ENST00000470241 ZRANB1Q9UGI0 708 aa14.54□□□□□ -0.08
SMC1A-206ENST00000470241 USP31Q70CQ4 1352 aa14.53□□□□□ -0.08
SMC1A-206ENST00000470241 PIK3C2AO00443 1686 aa14.52□□□□□ -0.08
SMC1A-206ENST00000470241 FYB1O15117 783 aa14.52□□□□□ -0.09
SMC1A-206ENST00000470241 NLRP6P59044 892 aa14.52□□□□□ -0.09
SMC1A-206ENST00000470241 CABLES1Q8TDN4 633 aa14.52□□□□□ -0.09
SMC1A-206ENST00000470241 SHPRHQ149N8 1683 aa14.52□□□□□ -0.09
SMC1A-206ENST00000470241 COL22A1Q8NFW1 1626 aaPredicted RBP14.52□□□□□ -0.09
SMC1A-206ENST00000470241 USP19O94966 1318 aa14.51□□□□□ -0.09
SMC1A-206ENST00000470241 SPATA31A6Q5VVP1 1343 aa14.51□□□□□ -0.09
SMC1A-206ENST00000470241 PLEKHG5O94827 1062 aa14.51□□□□□ -0.09
SMC1A-206ENST00000470241 DDX10Q13206 875 aaKnown RBP14.51□□□□□ -0.09
SMC1A-206ENST00000470241 NLRP13Q86W25 1043 aa14.51□□□□□ -0.09
SMC1A-206ENST00000470241 MED1Q15648 1581 aaPredicted RBP14.51□□□□□ -0.09
SMC1A-206ENST00000470241 OVOS2A0A0J9YW53 1432 aa14.5□□□□□ -0.09
SMC1A-206ENST00000470241 OVOS2Q6IE36 1432 aa14.5□□□□□ -0.09
SMC1A-206ENST00000470241 CGNL1Q0VF96 1302 aa14.5□□□□□ -0.09
SMC1A-206ENST00000470241 AMER1Q5JTC6 1135 aaPredicted RBP14.5□□□□□ -0.09
SMC1A-206ENST00000470241 GGNBP2Q9H3C7 697 aa14.5□□□□□ -0.09
SMC1A-206ENST00000470241 KNSTRNQ9Y448 316 aa14.5□□□□□ -0.09
SMC1A-206ENST00000470241 NUTM2BA6NNL0 878 aaPredicted RBP14.49□□□□□ -0.09
SMC1A-206ENST00000470241 NUTM2EB1AL46 878 aaPredicted RBP14.49□□□□□ -0.09
SMC1A-206ENST00000470241 NUTM2AQ8IVF1 878 aaPredicted RBP14.49□□□□□ -0.09
SMC1A-206ENST00000470241 LRP6O75581 1613 aa14.48□□□□□ -0.09
SMC1A-206ENST00000470241 SLIT3O75094 1523 aa14.47□□□□□ -0.09
SMC1A-206ENST00000470241 GCP02774 474 aa14.47□□□□□ -0.09
SMC1A-206ENST00000470241 COG3Q96JB2 828 aa14.47□□□□□ -0.09
SMC1A-206ENST00000470241 MARF1Q9Y4F3 1742 aaKnown RBP14.46□□□□□ -0.1
SMC1A-206ENST00000470241 CRYBG1Q9Y4K1 1723 aa14.46□□□□□ -0.1
SMC1A-206ENST00000470241 NSD2O96028 1365 aa14.46□□□□□ -0.1
SMC1A-206ENST00000470241 USP54Q70EL1 1684 aa14.46□□□□□ -0.1
SMC1A-206ENST00000470241 ADAMTS2O95450 1211 aa14.45□□□□□ -0.1
SMC1A-206ENST00000470241 HAP1P54257 671 aaPredicted RBP14.45□□□□□ -0.1
SMC1A-206ENST00000470241 NPC1L1Q9UHC9 1359 aa14.45□□□□□ -0.1
SMC1A-206ENST00000470241 SOX12O15370 315 aa14.44□□□□□ -0.1
SMC1A-206ENST00000470241 KCNH5Q8NCM2 988 aa14.44□□□□□ -0.1
SMC1A-206ENST00000470241 PHRF1Q9P1Y6 1649 aaKnown RBP14.44□□□□□ -0.1
SMC1A-206ENST00000470241 ABCA3Q99758 1704 aa14.44□□□□□ -0.1
SMC1A-206ENST00000470241 NFAT5O94916 1531 aa14.43□□□□□ -0.1
SMC1A-206ENST00000470241 FBLN1P23142 703 aa14.43□□□□□ -0.1
SMC1A-206ENST00000470241 ZC3H6P61129 1189 aaKnown RBP14.43□□□□□ -0.1
SMC1A-206ENST00000470241 CC2D1BQ5T0F9 858 aaKnown RBP14.43□□□□□ -0.1
SMC1A-206ENST00000470241 KIF20BQ96Q89 1820 aa14.43□□□□□ -0.1
SMC1A-206ENST00000470241 CPDO75976 1380 aa14.42□□□□□ -0.1
SMC1A-206ENST00000470241 KIAA0232Q92628 1395 aa14.42□□□□□ -0.1
SMC1A-206ENST00000470241 FAM83GA6ND36 823 aa14.41□□□□□ -0.1
SMC1A-206ENST00000470241 MORC1Q86VD1 984 aa14.41□□□□□ -0.1
SMC1A-206ENST00000470241 ARHGEF25Q86VW2 580 aa14.41□□□□□ -0.1
SMC1A-206ENST00000470241 CNGB1Q14028 1251 aaPredicted RBP14.4□□□□□ -0.1
SMC1A-206ENST00000470241 MEX3CQ5U5Q3 659 aaKnown RBP14.4□□□□□ -0.1
SMC1A-206ENST00000470241 PRDM11Q9NQV5 511 aa14.4□□□□□ -0.1
SMC1A-206ENST00000470241 AATKQ6ZMQ8 1374 aa14.39□□□□□ -0.11
SMC1A-206ENST00000470241 TNNT2P45379 298 aaPredicted RBP14.39□□□□□ -0.11
SMC1A-206ENST00000470241 CHRNA2Q15822 529 aa14.39□□□□□ -0.11
SMC1A-206ENST00000470241 C8orf37Q96NL8 207 aa14.39□□□□□ -0.11
SMC1A-206ENST00000470241 ZBTB7CA1YPR0 619 aa14.38□□□□□ -0.11
SMC1A-206ENST00000470241 RRS1Q15050 365 aaKnown RBP14.38□□□□□ -0.11
SMC1A-206ENST00000470241 MAP3K19Q56UN5 1328 aa14.38□□□□□ -0.11
SMC1A-206ENST00000470241 FNBP4Q8N3X1 1017 aaPredicted RBP14.37□□□□□ -0.11
SMC1A-206ENST00000470241 NGLY1Q96IV0 654 aa14.37□□□□□ -0.11
SMC1A-206ENST00000470241 ANKRD26Q9UPS8 1709 aa14.37□□□□□ -0.11
SMC1A-206ENST00000470241 SLIT2O94813 1529 aa14.36□□□□□ -0.11
SMC1A-206ENST00000470241 POLKQ9UBT6 870 aa14.36□□□□□ -0.11
SMC1A-206ENST00000470241 EMILIN1Q9Y6C2 1016 aa14.36□□□□□ -0.11
SMC1A-206ENST00000470241 PARD3Q8TEW0 1356 aa14.35□□□□□ -0.11
SMC1A-206ENST00000470241 BTG4Q9NY30 223 aa14.35□□□□□ -0.11
SMC1A-206ENST00000470241 AXIN2Q9Y2T1 843 aa14.35□□□□□ -0.11
SMC1A-206ENST00000470241 AFF2P51816 1311 aa14.35□□□□□ -0.11
SMC1A-206ENST00000470241 BCL9LQ86UU0 1499 aa14.34□□□□□ -0.11
SMC1A-206ENST00000470241 IP6K1Q92551 441 aa14.34□□□□□ -0.11
SMC1A-206ENST00000470241 COL14A1Q05707 1796 aaKnown RBP14.34□□□□□ -0.11
SMC1A-206ENST00000470241 LMO7Q8WWI1 1683 aa14.33□□□□□ -0.11
SMC1A-206ENST00000470241 CAMTA1Q9Y6Y1 1673 aa14.33□□□□□ -0.11
SMC1A-206ENST00000470241 HOXC9P31274 260 aa14.33□□□□□ -0.12
SMC1A-206ENST00000470241 AMPHP49418 695 aa14.33□□□□□ -0.12
SMC1A-206ENST00000470241 USP21Q9UK80 565 aa14.33□□□□□ -0.12
SMC1A-206ENST00000470241 RTL1A6NKG5 1358 aa14.33□□□□□ -0.12
SMC1A-206ENST00000470241 KIF24Q5T7B8 1368 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms