RNA–Protein interactions for RNA: ENST00000470121.5

CCNL1-212, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 1,889 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-212ENST00000470121 AMOTL2Q9Y2J4 779 aa18.26■□□□□ 0.51
CCNL1-212ENST00000470121 MON2Q7Z3U7 1717 aa18.25■□□□□ 0.51
CCNL1-212ENST00000470121 AKAP12Q02952 1782 aa18.25■□□□□ 0.51
CCNL1-212ENST00000470121 CCDC27Q2M243 656 aa18.25■□□□□ 0.51
CCNL1-212ENST00000470121 CEP170BQ9Y4F5 1589 aaPredicted RBP18.25■□□□□ 0.51
CCNL1-212ENST00000470121 RIMS1Q86UR5 1692 aaKnown RBP18.25■□□□□ 0.51
CCNL1-212ENST00000470121 ZNF692Q9BU19 519 aaPredicted RBP18.24■□□□□ 0.51
CCNL1-212ENST00000470121 ADAMTSL3P82987 1691 aa18.24■□□□□ 0.51
CCNL1-212ENST00000470121 PTCH1Q13635 1447 aa18.24■□□□□ 0.51
CCNL1-212ENST00000470121 U2AF1L5P0DN76 240 aaPredicted RBP18.24■□□□□ 0.51
CCNL1-212ENST00000470121 U2AF1Q01081 240 aaKnown RBP eCLIP18.24■□□□□ 0.513e-15■■■■□ 23.4
CCNL1-212ENST00000470121 EXOC6Q8TAG9 804 aa18.24■□□□□ 0.51
CCNL1-212ENST00000470121 PLEKHF1Q96S99 279 aa18.23■□□□□ 0.51
CCNL1-212ENST00000470121 TOPAZ1Q8N9V7 1692 aa18.23■□□□□ 0.51
CCNL1-212ENST00000470121 PLEKHG3A1L390 1219 aa18.22■□□□□ 0.51
CCNL1-212ENST00000470121 POLKQ9UBT6 870 aa18.22■□□□□ 0.51
CCNL1-212ENST00000470121 NKTRP30414 1462 aaKnown RBP18.22■□□□□ 0.51
CCNL1-212ENST00000470121 PLIN1O60240 522 aa18.22■□□□□ 0.51
CCNL1-212ENST00000470121 WDR63Q8IWG1 891 aa18.22■□□□□ 0.51
CCNL1-212ENST00000470121 NME9Q86XW9 330 aa18.21■□□□□ 0.51
CCNL1-212ENST00000470121 CCDC136Q96JN2 1154 aa18.2■□□□□ 0.5
CCNL1-212ENST00000470121 RRP7AQ9Y3A4 280 aaKnown RBP18.2■□□□□ 0.5
CCNL1-212ENST00000470121 ITSN1Q15811 1721 aa18.2■□□□□ 0.5
CCNL1-212ENST00000470121 XRN1Q8IZH2 1706 aaKnown RBP18.2■□□□□ 0.5
CCNL1-212ENST00000470121 AATKQ6ZMQ8 1374 aa18.2■□□□□ 0.5
CCNL1-212ENST00000470121 DIAPH1O60610 1272 aaKnown RBP18.2■□□□□ 0.5
CCNL1-212ENST00000470121 PIK3R4Q99570 1358 aa18.19■□□□□ 0.5
CCNL1-212ENST00000470121 ZRANB1Q9UGI0 708 aa18.19■□□□□ 0.5
CCNL1-212ENST00000470121 FBLN1P23142 703 aa18.18■□□□□ 0.5
CCNL1-212ENST00000470121 NEUROD2Q15784 382 aa18.18■□□□□ 0.5
CCNL1-212ENST00000470121 MAP2P11137 1827 aaKnown RBP18.18■□□□□ 0.5
CCNL1-212ENST00000470121 ZNF142P52746 1687 aaPredicted RBP18.17■□□□□ 0.5
CCNL1-212ENST00000470121 U2SURPO15042 1029 aaKnown RBP18.17■□□□□ 0.5
CCNL1-212ENST00000470121 NRKQ7Z2Y5 1582 aa18.17■□□□□ 0.5
CCNL1-212ENST00000470121 ACEP12821 1306 aa18.16■□□□□ 0.5
CCNL1-212ENST00000470121 CRBNQ96SW2 442 aa18.16■□□□□ 0.5
CCNL1-212ENST00000470121 TTC21BQ7Z4L5 1316 aa18.15■□□□□ 0.5
CCNL1-212ENST00000470121 C20orf194Q5TEA3 1177 aa18.15■□□□□ 0.5
CCNL1-212ENST00000470121 SSH2Q76I76 1423 aa18.15■□□□□ 0.5
CCNL1-212ENST00000470121 COG3Q96JB2 828 aa18.15■□□□□ 0.5
CCNL1-212ENST00000470121 TMPOP42166 694 aaKnown RBP18.14■□□□□ 0.49
CCNL1-212ENST00000470121 ANKLE2Q86XL3 938 aa18.14■□□□□ 0.49
CCNL1-212ENST00000470121 USP6P35125 1406 aa18.13■□□□□ 0.49
CCNL1-212ENST00000470121 SETD1BQ9UPS6 1966 aaKnown RBP18.13■□□□□ 0.49
CCNL1-212ENST00000470121 FCHSD2O94868 740 aa18.13■□□□□ 0.49
CCNL1-212ENST00000470121 KCNA6P17658 529 aa18.13■□□□□ 0.49
CCNL1-212ENST00000470121 PNNQ9H307 717 aaKnown RBP18.13■□□□□ 0.49
CCNL1-212ENST00000470121 EMILIN1Q9Y6C2 1016 aa18.13■□□□□ 0.49
CCNL1-212ENST00000470121 CDK12Q9NYV4 1490 aaPredicted RBP18.13■□□□□ 0.49
CCNL1-212ENST00000470121 IL13P35225 146 aa18.12■□□□□ 0.49
CCNL1-212ENST00000470121 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.12■□□□□ 0.49
CCNL1-212ENST00000470121 TRIM35Q9UPQ4 493 aa18.12■□□□□ 0.49
CCNL1-212ENST00000470121 NUTM2FA1L443 756 aa18.12■□□□□ 0.49
CCNL1-212ENST00000470121 RBM19Q9Y4C8 960 aaKnown RBP18.12■□□□□ 0.49
CCNL1-212ENST00000470121 RSPH6AQ9H0K4 717 aa18.11■□□□□ 0.49
CCNL1-212ENST00000470121 BCAR3O75815 825 aa18.1■□□□□ 0.49
CCNL1-212ENST00000470121 OVOS2A0A0J9YW53 1432 aa18.1■□□□□ 0.49
CCNL1-212ENST00000470121 OVOS2Q6IE36 1432 aa18.1■□□□□ 0.49
CCNL1-212ENST00000470121 PPM1GO15355 546 aaPredicted RBP18.09■□□□□ 0.49
CCNL1-212ENST00000470121 CHD2O14647 1828 aaKnown RBP18.09■□□□□ 0.49
CCNL1-212ENST00000470121 MAPK8IP3Q9UPT6 1336 aa18.09■□□□□ 0.49
CCNL1-212ENST00000470121 ANKARQ7Z5J8 1434 aa18.08■□□□□ 0.49
CCNL1-212ENST00000470121 MYH16Q9H6N6 1097 aa18.07■□□□□ 0.48
CCNL1-212ENST00000470121 LRRC7Q96NW7 1537 aa18.07■□□□□ 0.48
CCNL1-212ENST00000470121 IL16Q14005 1332 aa18.07■□□□□ 0.48
CCNL1-212ENST00000470121 USP31Q70CQ4 1352 aa18.07■□□□□ 0.48
CCNL1-212ENST00000470121 RGPD8O14715 1765 aaPredicted RBP18.07■□□□□ 0.48
CCNL1-212ENST00000470121 RRS1Q15050 365 aaKnown RBP18.07■□□□□ 0.48
CCNL1-212ENST00000470121 NALCNQ8IZF0 1738 aa18.06■□□□□ 0.48
CCNL1-212ENST00000470121 TTC21AQ8NDW8 1320 aa18.06■□□□□ 0.48
CCNL1-212ENST00000470121 RARSP54136 660 aaKnown RBP18.05■□□□□ 0.48
CCNL1-212ENST00000470121 RIPK4P57078 832 aa18.05■□□□□ 0.48
CCNL1-212ENST00000470121 PMFBP1Q8TBY8 1022 aa18.05■□□□□ 0.48
CCNL1-212ENST00000470121 FMN2Q9NZ56 1722 aa18.05■□□□□ 0.48
CCNL1-212ENST00000470121 PRKAR2BP31323 418 aa18.05■□□□□ 0.48
CCNL1-212ENST00000470121 PDE3AQ14432 1141 aa18.03■□□□□ 0.48
CCNL1-212ENST00000470121 PHACTR3Q96KR7 559 aa18.03■□□□□ 0.48
CCNL1-212ENST00000470121 HMOX1P09601 288 aa18.02■□□□□ 0.48
CCNL1-212ENST00000470121 CT47B1P0C2W7 299 aaPredicted RBP18.02■□□□□ 0.48
CCNL1-212ENST00000470121 NGDNQ8NEJ9 315 aaKnown RBP18.02■□□□□ 0.48
CCNL1-212ENST00000470121 FANCIQ9NVI1 1328 aa18.01■□□□□ 0.47
CCNL1-212ENST00000470121 NFE2L2Q16236 605 aa18.01■□□□□ 0.47
CCNL1-212ENST00000470121 NPHP4O75161 1426 aaPredicted RBP18.01■□□□□ 0.47
CCNL1-212ENST00000470121 PEAK1Q9H792 1746 aa17.99■□□□□ 0.47
CCNL1-212ENST00000470121 KDM2BQ8NHM5 1336 aa17.99■□□□□ 0.47
CCNL1-212ENST00000470121 EIF4A2Q14240 407 aaKnown RBP17.99■□□□□ 0.47
CCNL1-212ENST00000470121 TSR2Q969E8 191 aaKnown RBP17.99■□□□□ 0.47
CCNL1-212ENST00000470121 NEFMP07197 916 aa17.98■□□□□ 0.47
CCNL1-212ENST00000470121 PIK3C2AO00443 1686 aa17.97■□□□□ 0.47
CCNL1-212ENST00000470121 EXOSC9Q06265 439 aaKnown RBP17.97■□□□□ 0.47
CCNL1-212ENST00000470121 USP54Q70EL1 1684 aa17.96■□□□□ 0.47
CCNL1-212ENST00000470121 HSP90AB2PQ58FF8 381 aa17.95■□□□□ 0.46
CCNL1-212ENST00000470121 ADGRL3Q9HAR2 1447 aa17.95■□□□□ 0.46
CCNL1-212ENST00000470121 RGPD1P0DJD0 1748 aa17.95■□□□□ 0.46
CCNL1-212ENST00000470121 MAP3K19Q56UN5 1328 aa17.94■□□□□ 0.46
CCNL1-212ENST00000470121 MARF1Q9Y4F3 1742 aaKnown RBP17.93■□□□□ 0.46
CCNL1-212ENST00000470121 PANK1Q8TE04 598 aa17.93■□□□□ 0.46
CCNL1-212ENST00000470121 TCERG1O14776 1098 aaKnown RBP17.92■□□□□ 0.46
CCNL1-212ENST00000470121 ZNF853P0CG23 659 aa17.92■□□□□ 0.46
CCNL1-212ENST00000470121 CENPQQ7L2Z9 268 aaPredicted RBP17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms