RNA–Protein interactions for RNA: ENST00000469882.5

FXR1-208, Transcript of FMR1 autosomal homolog 1, humanhuman

TSL 3

Gene FXR1, Length 570 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-208ENST00000469882 NRAPQ86VF7 1730 aa16.17■□□□□ 0.18
FXR1-208ENST00000469882 PHRF1Q9P1Y6 1649 aaKnown RBP16.17■□□□□ 0.18
FXR1-208ENST00000469882 UNC5CLQ8IV45 518 aa16.17■□□□□ 0.18
FXR1-208ENST00000469882 UPF1Q92900 1129 aaKnown RBP eCLIP16.17■□□□□ 0.18
FXR1-208ENST00000469882 ACEP12821 1306 aa16.17■□□□□ 0.18
FXR1-208ENST00000469882 RALGAPBQ86X10 1494 aa16.16■□□□□ 0.18
FXR1-208ENST00000469882 PAK3O75914 559 aaPredicted RBP16.16■□□□□ 0.18
FXR1-208ENST00000469882 SRPK2P78362 688 aaKnown RBP16.16■□□□□ 0.18
FXR1-208ENST00000469882 CABP2Q9NPB3 220 aa16.16■□□□□ 0.18
FXR1-208ENST00000469882 CCDC61Q9Y6R9 512 aa16.16■□□□□ 0.18
FXR1-208ENST00000469882 PPIP5K1Q6PFW1 1433 aa16.16■□□□□ 0.18
FXR1-208ENST00000469882 PLEKHG3A1L390 1219 aa16.15■□□□□ 0.18
FXR1-208ENST00000469882 COL14A1Q05707 1796 aaKnown RBP16.15■□□□□ 0.18
FXR1-208ENST00000469882 TONSLQ96HA7 1378 aa16.14■□□□□ 0.17
FXR1-208ENST00000469882 FAM83GA6ND36 823 aa16.14■□□□□ 0.17
FXR1-208ENST00000469882 GJD4Q96KN9 370 aaPredicted RBP16.14■□□□□ 0.17
FXR1-208ENST00000469882 NRKQ7Z2Y5 1582 aa16.12■□□□□ 0.17
FXR1-208ENST00000469882 BRWD3Q6RI45 1802 aa16.1■□□□□ 0.17
FXR1-208ENST00000469882 VPS72Q15906 364 aa16.1■□□□□ 0.17
FXR1-208ENST00000469882 NUTM2GQ5VZR2 741 aa16.1■□□□□ 0.17
FXR1-208ENST00000469882 EVC2Q86UK5 1308 aa16.1■□□□□ 0.17
FXR1-208ENST00000469882 ATAD2Q6PL18 1390 aa16.1■□□□□ 0.17
FXR1-208ENST00000469882 CARD11Q9BXL7 1154 aa16.08■□□□□ 0.16
FXR1-208ENST00000469882 BTG4Q9NY30 223 aa16.08■□□□□ 0.16
FXR1-208ENST00000469882 CABP1Q9NZU7 370 aa16.08■□□□□ 0.16
FXR1-208ENST00000469882 KIAA0232Q92628 1395 aa16.08■□□□□ 0.16
FXR1-208ENST00000469882 USP6P35125 1406 aa16.08■□□□□ 0.16
FXR1-208ENST00000469882 AKAP12Q02952 1782 aa16.08■□□□□ 0.16
FXR1-208ENST00000469882 PIK3C2AO00443 1686 aa16.07■□□□□ 0.16
FXR1-208ENST00000469882 SBNO2Q9Y2G9 1366 aa16.06■□□□□ 0.16
FXR1-208ENST00000469882 USP19O94966 1318 aa16.06■□□□□ 0.16
FXR1-208ENST00000469882 PRDM11Q9NQV5 511 aa16.06■□□□□ 0.16
FXR1-208ENST00000469882 CCDC9Q9Y3X0 531 aaKnown RBP16.06■□□□□ 0.16
FXR1-208ENST00000469882 SSH2Q76I76 1423 aa16.05■□□□□ 0.16
FXR1-208ENST00000469882 ABTB2Q8N961 1025 aa16.05■□□□□ 0.16
FXR1-208ENST00000469882 BRD4O60885 1362 aaPredicted RBP16.04■□□□□ 0.16
FXR1-208ENST00000469882 ZC3H6P61129 1189 aaKnown RBP16.04■□□□□ 0.16
FXR1-208ENST00000469882 CHRNA2Q15822 529 aa16.04■□□□□ 0.16
FXR1-208ENST00000469882 LMO7Q8WWI1 1683 aa16.04■□□□□ 0.16
FXR1-208ENST00000469882 SEPT12Q8IYM1 358 aa16.03■□□□□ 0.16
FXR1-208ENST00000469882 SLIT3O75094 1523 aa16.03■□□□□ 0.16
FXR1-208ENST00000469882 MON2Q7Z3U7 1717 aa16.02■□□□□ 0.16
FXR1-208ENST00000469882 THSD7AQ9UPZ6 1657 aa16.02■□□□□ 0.15
FXR1-208ENST00000469882 CPDO75976 1380 aa16.01■□□□□ 0.15
FXR1-208ENST00000469882 ONECUT3O60422 494 aaPredicted RBP16.01■□□□□ 0.15
FXR1-208ENST00000469882 CAMTA1Q9Y6Y1 1673 aa16.01■□□□□ 0.15
FXR1-208ENST00000469882 CPSF1Q10570 1443 aaKnown RBP16.01■□□□□ 0.15
FXR1-208ENST00000469882 SPATA31A5Q5VU36 1347 aa16■□□□□ 0.15
FXR1-208ENST00000469882 SPATA31A7Q8IWB4 1347 aa16■□□□□ 0.15
FXR1-208ENST00000469882 FAM98CQ17RN3 349 aaKnown RBP16■□□□□ 0.15
FXR1-208ENST00000469882 CD163L1Q9NR16 1453 aa15.99■□□□□ 0.15
FXR1-208ENST00000469882 GCP02774 474 aa15.99■□□□□ 0.15
FXR1-208ENST00000469882 NLRP13Q86W25 1043 aa15.99■□□□□ 0.15
FXR1-208ENST00000469882 TTC21BQ7Z4L5 1316 aa15.97■□□□□ 0.15
FXR1-208ENST00000469882 NLRP6P59044 892 aa15.97■□□□□ 0.15
FXR1-208ENST00000469882 STRN4Q9NRL3 753 aa15.97■□□□□ 0.15
FXR1-208ENST00000469882 KTN1Q86UP2 1357 aaKnown RBP15.97■□□□□ 0.15
FXR1-208ENST00000469882 SRCAPQ6ZRS2 3230 aa15.96■□□□□ 0.15
FXR1-208ENST00000469882 SPATA31A1Q5TZJ5 1347 aa15.96■□□□□ 0.15
FXR1-208ENST00000469882 A0A0G2JS52 829 aa15.96■□□□□ 0.15
FXR1-208ENST00000469882 MYT1Q01538 1121 aa15.96■□□□□ 0.15
FXR1-208ENST00000469882 KRT27Q7Z3Y8 459 aa15.96■□□□□ 0.15
FXR1-208ENST00000469882 TESK2Q96S53 571 aa15.96■□□□□ 0.15
FXR1-208ENST00000469882 ZNF692Q9BU19 519 aaPredicted RBP15.96■□□□□ 0.15
FXR1-208ENST00000469882 COL5A2P05997 1499 aaPredicted RBP15.96■□□□□ 0.14
FXR1-208ENST00000469882 COL18A1P39060 1754 aa15.95■□□□□ 0.14
FXR1-208ENST00000469882 BLMP54132 1417 aaPredicted RBP15.95■□□□□ 0.14
FXR1-208ENST00000469882 USP54Q70EL1 1684 aa15.95■□□□□ 0.14
FXR1-208ENST00000469882 NFAT5O94916 1531 aa15.94■□□□□ 0.14
FXR1-208ENST00000469882 ST20-MTHFSA0A0A6YYL1 179 aa15.94■□□□□ 0.14
FXR1-208ENST00000469882 LARP1Q6PKG0 1096 aaKnown RBP15.94■□□□□ 0.14
FXR1-208ENST00000469882 PCGF6Q9BYE7 350 aa15.94■□□□□ 0.14
FXR1-208ENST00000469882 TTC21AQ8NDW8 1320 aa15.94■□□□□ 0.14
FXR1-208ENST00000469882 AATKQ6ZMQ8 1374 aa15.92■□□□□ 0.14
FXR1-208ENST00000469882 USP47Q96K76 1375 aa15.92■□□□□ 0.14
FXR1-208ENST00000469882 ZBTB7CA1YPR0 619 aa15.92■□□□□ 0.14
FXR1-208ENST00000469882 CCDC125Q86Z20 511 aa15.92■□□□□ 0.14
FXR1-208ENST00000469882 TMC1Q8TDI8 760 aa15.92■□□□□ 0.14
FXR1-208ENST00000469882 SLC12A5Q9H2X9 1139 aa15.92■□□□□ 0.14
FXR1-208ENST00000469882 A0A1W2PP64 1363 aa15.91■□□□□ 0.14
FXR1-208ENST00000469882 EVA1CP58658 441 aa15.91■□□□□ 0.14
FXR1-208ENST00000469882 USP35Q9P2H5 1018 aa15.91■□□□□ 0.14
FXR1-208ENST00000469882 CLSPNQ9HAW4 1339 aa15.91■□□□□ 0.14
FXR1-208ENST00000469882 RGPD5Q99666 1765 aa15.9■□□□□ 0.14
FXR1-208ENST00000469882 SOX12O15370 315 aa15.9■□□□□ 0.14
FXR1-208ENST00000469882 FAM182BQ5T319 152 aa15.9■□□□□ 0.14
FXR1-208ENST00000469882 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.9■□□□□ 0.14
FXR1-208ENST00000469882 ZRANB1Q9UGI0 708 aa15.9■□□□□ 0.14
FXR1-208ENST00000469882 EDC4Q6P2E9 1401 aaKnown RBP15.9■□□□□ 0.14
FXR1-208ENST00000469882 RGPD1P0DJD0 1748 aa15.89■□□□□ 0.13
FXR1-208ENST00000469882 TNS1Q9HBL0 1735 aaKnown RBP15.89■□□□□ 0.13
FXR1-208ENST00000469882 PUS7Q96PZ0 661 aaKnown RBP15.89■□□□□ 0.13
FXR1-208ENST00000469882 WNK3Q9BYP7 1800 aa15.89■□□□□ 0.13
FXR1-208ENST00000469882 USP31Q70CQ4 1352 aa15.88■□□□□ 0.13
FXR1-208ENST00000469882 PARP4Q9UKK3 1724 aaKnown RBP15.88■□□□□ 0.13
FXR1-208ENST00000469882 CRB1P82279 1406 aa15.88■□□□□ 0.13
FXR1-208ENST00000469882 BARGINQ6ZT62 677 aa15.88■□□□□ 0.13
FXR1-208ENST00000469882 HDGFL2Q7Z4V5 671 aaPredicted RBP15.88■□□□□ 0.13
FXR1-208ENST00000469882 ARHGEF25Q86VW2 580 aa15.88■□□□□ 0.13
FXR1-208ENST00000469882 NME9Q86XW9 330 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 159.2 ms