RNA–Protein interactions for RNA: ENST00000469602.1

SRRT-208, Transcript of serrate, RNA effector molecule, human

TSL 2

Gene SRRT, Length 376 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SRRT-208	ENST00000469602	ATAD2	Q6PL18	1390 aa		13.73	□□□□□ -0.21
SRRT-208	ENST00000469602	CABLES1	Q8TDN4	633 aa		13.73	□□□□□ -0.21
SRRT-208	ENST00000469602	HAP1	P54257	671 aa	Predicted RBP	13.72	□□□□□ -0.21
SRRT-208	ENST00000469602	TESK2	Q96S53	571 aa		13.72	□□□□□ -0.21
SRRT-208	ENST00000469602	BRD4	O60885	1362 aa	Predicted RBP	13.71	□□□□□ -0.21
SRRT-208	ENST00000469602	SLC24A1	O60721	1099 aa		13.71	□□□□□ -0.21
SRRT-208	ENST00000469602	PLEKHG5	O94827	1062 aa		13.71	□□□□□ -0.21
SRRT-208	ENST00000469602	FNBP4	Q8N3X1	1017 aa	Predicted RBP	13.71	□□□□□ -0.21
SRRT-208	ENST00000469602	USP6	P35125	1406 aa		13.71	□□□□□ -0.22
SRRT-208	ENST00000469602	PHRF1	Q9P1Y6	1649 aa	Known RBP	13.7	□□□□□ -0.22
SRRT-208	ENST00000469602	MON2	Q7Z3U7	1717 aa		13.7	□□□□□ -0.22
SRRT-208	ENST00000469602	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	13.7	□□□□□ -0.22
SRRT-208	ENST00000469602	PLCH1	Q4KWH8	1693 aa		13.69	□□□□□ -0.22
SRRT-208	ENST00000469602	SOCS7	O14512	581 aa		13.69	□□□□□ -0.22
SRRT-208	ENST00000469602	PUS7	Q96PZ0	661 aa	Known RBP	13.69	□□□□□ -0.22
SRRT-208	ENST00000469602	USP21	Q9UK80	565 aa		13.69	□□□□□ -0.22
SRRT-208	ENST00000469602	NWD2	Q9ULI1	1742 aa		13.69	□□□□□ -0.22
SRRT-208	ENST00000469602	BCL9L	Q86UU0	1499 aa		13.68	□□□□□ -0.22
SRRT-208	ENST00000469602	NRK	Q7Z2Y5	1582 aa		13.68	□□□□□ -0.22
SRRT-208	ENST00000469602	CPSF1	Q10570	1443 aa	Known RBP	13.68	□□□□□ -0.22
SRRT-208	ENST00000469602	SSH2	Q76I76	1423 aa		13.68	□□□□□ -0.22
SRRT-208	ENST00000469602	ABTB2	Q8N961	1025 aa		13.68	□□□□□ -0.22
SRRT-208	ENST00000469602	ZNF692	Q9BU19	519 aa	Predicted RBP	13.68	□□□□□ -0.22
SRRT-208	ENST00000469602	SLIT2	O94813	1529 aa		13.68	□□□□□ -0.22
SRRT-208	ENST00000469602	PIK3C2A	O00443	1686 aa		13.67	□□□□□ -0.22
SRRT-208	ENST00000469602	RXRB	P28702	533 aa		13.67	□□□□□ -0.22
SRRT-208	ENST00000469602	QTRT2	Q9H974	415 aa	Known RBP	13.67	□□□□□ -0.22
SRRT-208	ENST00000469602	COL14A1	Q05707	1796 aa	Known RBP	13.67	□□□□□ -0.22
SRRT-208	ENST00000469602	NUTM2G	Q5VZR2	741 aa		13.66	□□□□□ -0.22
SRRT-208	ENST00000469602	TMC1	Q8TDI8	760 aa		13.66	□□□□□ -0.22
SRRT-208	ENST00000469602	TRPC5	Q9UL62	973 aa	Predicted RBP	13.66	□□□□□ -0.22
SRRT-208	ENST00000469602	KTN1	Q86UP2	1357 aa	Known RBP	13.66	□□□□□ -0.22
SRRT-208	ENST00000469602	CD163L1	Q9NR16	1453 aa		13.66	□□□□□ -0.22
SRRT-208	ENST00000469602	ATRN	O75882	1429 aa		13.65	□□□□□ -0.22
SRRT-208	ENST00000469602	FAM83G	A6ND36	823 aa		13.65	□□□□□ -0.22
SRRT-208	ENST00000469602	TMF1	P82094	1093 aa		13.65	□□□□□ -0.22
SRRT-208	ENST00000469602	NINL	Q9Y2I6	1382 aa		13.65	□□□□□ -0.22
SRRT-208	ENST00000469602	CDK12	Q9NYV4	1490 aa	Predicted RBP	13.65	□□□□□ -0.22
SRRT-208	ENST00000469602	USP19	O94966	1318 aa		13.64	□□□□□ -0.23
SRRT-208	ENST00000469602	RBM6	P78332	1123 aa	Known RBP	13.64	□□□□□ -0.23
SRRT-208	ENST00000469602	NLRP13	Q86W25	1043 aa		13.64	□□□□□ -0.23
SRRT-208	ENST00000469602	SLC12A5	Q9H2X9	1139 aa		13.64	□□□□□ -0.23
SRRT-208	ENST00000469602	UNC5CL	Q8IV45	518 aa		13.63	□□□□□ -0.23
SRRT-208	ENST00000469602	NRAP	Q86VF7	1730 aa		13.63	□□□□□ -0.23
SRRT-208	ENST00000469602	TTC21B	Q7Z4L5	1316 aa		13.63	□□□□□ -0.23
SRRT-208	ENST00000469602	TTC21A	Q8NDW8	1320 aa		13.63	□□□□□ -0.23
SRRT-208	ENST00000469602	KIAA0232	Q92628	1395 aa		13.62	□□□□□ -0.23
SRRT-208	ENST00000469602	NLRP6	P59044	892 aa		13.62	□□□□□ -0.23
SRRT-208	ENST00000469602	CDCA8	Q53HL2	280 aa		13.62	□□□□□ -0.23
SRRT-208	ENST00000469602	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	13.62	□□□□□ -0.23
SRRT-208	ENST00000469602	TERF2IP	Q9NYB0	399 aa		13.62	□□□□□ -0.23
SRRT-208	ENST00000469602		A0A1W2PP64	1363 aa		13.61	□□□□□ -0.23
SRRT-208	ENST00000469602	SLIT3	O75094	1523 aa		13.61	□□□□□ -0.23
SRRT-208	ENST00000469602	PRDM11	Q9NQV5	511 aa		13.61	□□□□□ -0.23
SRRT-208	ENST00000469602	CPD	O75976	1380 aa		13.6	□□□□□ -0.23
SRRT-208	ENST00000469602	USP54	Q70EL1	1684 aa		13.6	□□□□□ -0.23
SRRT-208	ENST00000469602	RGS12	O14924	1447 aa		13.6	□□□□□ -0.23
SRRT-208	ENST00000469602	GC	P02774	474 aa		13.6	□□□□□ -0.23
SRRT-208	ENST00000469602	GLI3	P10071	1580 aa		13.6	□□□□□ -0.23
SRRT-208	ENST00000469602	ZC3H6	P61129	1189 aa	Known RBP	13.6	□□□□□ -0.23
SRRT-208	ENST00000469602	EIF4G2	P78344	907 aa	Known RBP eCLIP	13.6	□□□□□ -0.23
SRRT-208	ENST00000469602	EDC4	Q6P2E9	1401 aa	Known RBP	13.6	□□□□□ -0.23
SRRT-208	ENST00000469602	GJD4	Q96KN9	370 aa	Predicted RBP	13.6	□□□□□ -0.23
SRRT-208	ENST00000469602	BTG4	Q9NY30	223 aa		13.6	□□□□□ -0.23
SRRT-208	ENST00000469602	MYOM1	P52179	1685 aa		13.59	□□□□□ -0.23
SRRT-208	ENST00000469602	VPS72	Q15906	364 aa		13.59	□□□□□ -0.23
SRRT-208	ENST00000469602	HSPA5	P11021	654 aa	Known RBP	13.58	□□□□□ -0.24
SRRT-208	ENST00000469602	CHRNA2	Q15822	529 aa		13.58	□□□□□ -0.24
SRRT-208	ENST00000469602	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	13.58	□□□□□ -0.24
SRRT-208	ENST00000469602	LMO7	Q8WWI1	1683 aa		13.58	□□□□□ -0.24
SRRT-208	ENST00000469602	ANKRD36B	Q8N2N9	1353 aa		13.58	□□□□□ -0.24
SRRT-208	ENST00000469602	EP400	Q96L91	3159 aa		13.57	□□□□□ -0.24
SRRT-208	ENST00000469602	USP31	Q70CQ4	1352 aa		13.57	□□□□□ -0.24
SRRT-208	ENST00000469602	NME9	Q86XW9	330 aa		13.56	□□□□□ -0.24
SRRT-208	ENST00000469602	KCNH5	Q8NCM2	988 aa		13.56	□□□□□ -0.24
SRRT-208	ENST00000469602	CCDC9	Q9Y3X0	531 aa	Known RBP	13.56	□□□□□ -0.24
SRRT-208	ENST00000469602	CAMTA1	Q9Y6Y1	1673 aa		13.56	□□□□□ -0.24
SRRT-208	ENST00000469602	NFAT5	O94916	1531 aa		13.55	□□□□□ -0.24
SRRT-208	ENST00000469602	COL18A1	P39060	1754 aa		13.55	□□□□□ -0.24
SRRT-208	ENST00000469602	ZRANB1	Q9UGI0	708 aa		13.54	□□□□□ -0.24
SRRT-208	ENST00000469602	LTN1	O94822	1766 aa		13.53	□□□□□ -0.24
SRRT-208	ENST00000469602	RGPD5	Q99666	1765 aa		13.53	□□□□□ -0.24
SRRT-208	ENST00000469602	BRWD3	Q6RI45	1802 aa		13.53	□□□□□ -0.24
SRRT-208	ENST00000469602	STRN4	Q9NRL3	753 aa		13.53	□□□□□ -0.24
SRRT-208	ENST00000469602	SPATA31A5	Q5VU36	1347 aa		13.53	□□□□□ -0.24
SRRT-208	ENST00000469602	SPATA31A7	Q8IWB4	1347 aa		13.53	□□□□□ -0.24
SRRT-208	ENST00000469602	AATK	Q6ZMQ8	1374 aa		13.53	□□□□□ -0.24
SRRT-208	ENST00000469602	OVOS2	A0A0J9YW53	1432 aa		13.53	□□□□□ -0.24
SRRT-208	ENST00000469602	OVOS2	Q6IE36	1432 aa		13.53	□□□□□ -0.24
SRRT-208	ENST00000469602	KIF20B	Q96Q89	1820 aa		13.53	□□□□□ -0.24
SRRT-208	ENST00000469602	ZBTB7C	A1YPR0	619 aa		13.52	□□□□□ -0.25
SRRT-208	ENST00000469602	SOX12	O15370	315 aa		13.52	□□□□□ -0.25
SRRT-208	ENST00000469602	ONECUT3	O60422	494 aa	Predicted RBP	13.52	□□□□□ -0.25
SRRT-208	ENST00000469602	ARHGEF25	Q86VW2	580 aa		13.52	□□□□□ -0.25
SRRT-208	ENST00000469602	COL5A2	P05997	1499 aa	Predicted RBP	13.52	□□□□□ -0.25
SRRT-208	ENST00000469602	ABCC6	O95255	1503 aa		13.51	□□□□□ -0.25
SRRT-208	ENST00000469602	EVA1C	P58658	441 aa		13.51	□□□□□ -0.25
SRRT-208	ENST00000469602	SPATA31A1	Q5TZJ5	1347 aa		13.5	□□□□□ -0.25
SRRT-208	ENST00000469602	SEPT12	Q8IYM1	358 aa		13.5	□□□□□ -0.25
SRRT-208	ENST00000469602	POLR3GL	Q9BT43	218 aa		13.5	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms