RNA–Protein interactions for RNA: ENST00000469601.1

RTN4R-205, Transcript of reticulon 4 receptor, humanhuman

TSL 3

Gene RTN4R, Length 672 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4R-205ENST00000469601 TOPAZ1Q8N9V7 1692 aa30.28■■■□□ 2.44
RTN4R-205ENST00000469601 ALS2Q96Q42 1657 aa30.28■■■□□ 2.44
RTN4R-205ENST00000469601 GJD4Q96KN9 370 aaPredicted RBP30.28■■■□□ 2.44
RTN4R-205ENST00000469601 CARD11Q9BXL7 1154 aa30.28■■■□□ 2.44
RTN4R-205ENST00000469601 PPIP5K1Q6PFW1 1433 aa30.28■■■□□ 2.44
RTN4R-205ENST00000469601 FAM83GA6ND36 823 aa30.23■■■□□ 2.43
RTN4R-205ENST00000469601 BRD4O60885 1362 aaPredicted RBP30.23■■■□□ 2.43
RTN4R-205ENST00000469601 RALGAPBQ86X10 1494 aa30.23■■■□□ 2.43
RTN4R-205ENST00000469601 ABCA3Q99758 1704 aa30.22■■■□□ 2.43
RTN4R-205ENST00000469601 TNKS1BP1Q9C0C2 1729 aaKnown RBP30.22■■■□□ 2.43
RTN4R-205ENST00000469601 UPF1Q92900 1129 aaKnown RBP eCLIP30.22■■■□□ 2.43
RTN4R-205ENST00000469601 CABP1Q9NZU7 370 aa30.21■■■□□ 2.43
RTN4R-205ENST00000469601 VPS72Q15906 364 aa30.2■■■□□ 2.43
RTN4R-205ENST00000469601 SBNO2Q9Y2G9 1366 aa30.19■■■□□ 2.42
RTN4R-205ENST00000469601 ABTB2Q8N961 1025 aa30.19■■■□□ 2.42
RTN4R-205ENST00000469601 PRDM11Q9NQV5 511 aa30.17■■■□□ 2.42
RTN4R-205ENST00000469601 ATAD2Q6PL18 1390 aa30.16■■■□□ 2.42
RTN4R-205ENST00000469601 NWD2Q9ULI1 1742 aa30.16■■■□□ 2.42
RTN4R-205ENST00000469601 CCDC9Q9Y3X0 531 aaKnown RBP30.16■■■□□ 2.42
RTN4R-205ENST00000469601 NUTM2GQ5VZR2 741 aa30.15■■■□□ 2.42
RTN4R-205ENST00000469601 BTG4Q9NY30 223 aa30.15■■■□□ 2.42
RTN4R-205ENST00000469601 NLRP13Q86W25 1043 aa30.14■■■□□ 2.42
RTN4R-205ENST00000469601 ZNF692Q9BU19 519 aaPredicted RBP30.14■■■□□ 2.42
RTN4R-205ENST00000469601 CLSPNQ9HAW4 1339 aa30.13■■■□□ 2.41
RTN4R-205ENST00000469601 PLCH1Q4KWH8 1693 aa30.13■■■□□ 2.41
RTN4R-205ENST00000469601 COL14A1Q05707 1796 aaKnown RBP30.12■■■□□ 2.41
RTN4R-205ENST00000469601 USP6P35125 1406 aa30.12■■■□□ 2.41
RTN4R-205ENST00000469601 KIAA0232Q92628 1395 aa30.09■■■□□ 2.41
RTN4R-205ENST00000469601 TIMELESSQ9UNS1 1208 aa30.09■■■□□ 2.41
RTN4R-205ENST00000469601 CRYBG1Q9Y4K1 1723 aa30.09■■■□□ 2.41
RTN4R-205ENST00000469601 GLI3P10071 1580 aa30.08■■■□□ 2.41
RTN4R-205ENST00000469601 USP19O94966 1318 aa30.08■■■□□ 2.41
RTN4R-205ENST00000469601 SLC24A1O60721 1099 aa30.08■■■□□ 2.41
RTN4R-205ENST00000469601 PCGF6Q9BYE7 350 aa30.08■■■□□ 2.41
RTN4R-205ENST00000469601 ZC3H6P61129 1189 aaKnown RBP30.07■■■□□ 2.4
RTN4R-205ENST00000469601 ONECUT3O60422 494 aaPredicted RBP30.06■■■□□ 2.4
RTN4R-205ENST00000469601 NLRP6P59044 892 aa30.04■■■□□ 2.4
RTN4R-205ENST00000469601 SEPT12Q8IYM1 358 aa30.04■■■□□ 2.4
RTN4R-205ENST00000469601 PHRF1Q9P1Y6 1649 aaKnown RBP30.04■■■□□ 2.4
RTN4R-205ENST00000469601 CPDO75976 1380 aa30.03■■■□□ 2.4
RTN4R-205ENST00000469601 GCP02774 474 aa30.03■■■□□ 2.4
RTN4R-205ENST00000469601 CHRNA2Q15822 529 aa30.03■■■□□ 2.4
RTN4R-205ENST00000469601 PUS7Q96PZ0 661 aaKnown RBP30.03■■■□□ 2.4
RTN4R-205ENST00000469601 SSH2Q76I76 1423 aa30.03■■■□□ 2.4
RTN4R-205ENST00000469601 NRAPQ86VF7 1730 aa30.01■■■□□ 2.39
RTN4R-205ENST00000469601 TTC21AQ8NDW8 1320 aa30■■■□□ 2.39
RTN4R-205ENST00000469601 CCDC125Q86Z20 511 aa30■■■□□ 2.39
RTN4R-205ENST00000469601 SPATA31A5Q5VU36 1347 aa29.99■■■□□ 2.39
RTN4R-205ENST00000469601 TTC21BQ7Z4L5 1316 aa29.99■■■□□ 2.39
RTN4R-205ENST00000469601 SPATA31A7Q8IWB4 1347 aa29.99■■■□□ 2.39
RTN4R-205ENST00000469601 CPSF1Q10570 1443 aaKnown RBP29.99■■■□□ 2.39
RTN4R-205ENST00000469601 KTN1Q86UP2 1357 aaKnown RBP29.99■■■□□ 2.39
RTN4R-205ENST00000469601 ST20-MTHFSA0A0A6YYL1 179 aa29.98■■■□□ 2.39
RTN4R-205ENST00000469601 A0A0G2JS52 829 aa29.98■■■□□ 2.39
RTN4R-205ENST00000469601 MYT1Q01538 1121 aa29.98■■■□□ 2.39
RTN4R-205ENST00000469601 NRKQ7Z2Y5 1582 aa29.98■■■□□ 2.39
RTN4R-205ENST00000469601 EVA1CP58658 441 aa29.97■■■□□ 2.39
RTN4R-205ENST00000469601 FAM98CQ17RN3 349 aaKnown RBP29.97■■■□□ 2.39
RTN4R-205ENST00000469601 TMC1Q8TDI8 760 aa29.96■■■□□ 2.39
RTN4R-205ENST00000469601 HDGFL2Q7Z4V5 671 aaPredicted RBP29.95■■■□□ 2.39
RTN4R-205ENST00000469601 STRN4Q9NRL3 753 aa29.95■■■□□ 2.39
RTN4R-205ENST00000469601 KRT27Q7Z3Y8 459 aa29.94■■■□□ 2.38
RTN4R-205ENST00000469601 TESK2Q96S53 571 aa29.94■■■□□ 2.38
RTN4R-205ENST00000469601 KCNH5Q8NCM2 988 aa29.93■■■□□ 2.38
RTN4R-205ENST00000469601 TERF2IPQ9NYB0 399 aa29.93■■■□□ 2.38
RTN4R-205ENST00000469601 SPATA31A1Q5TZJ5 1347 aa29.92■■■□□ 2.38
RTN4R-205ENST00000469601 SLIT3O75094 1523 aa29.91■■■□□ 2.38
RTN4R-205ENST00000469601 NINLQ9Y2I6 1382 aa29.9■■■□□ 2.38
RTN4R-205ENST00000469601 AKAP12Q02952 1782 aa29.9■■■□□ 2.38
RTN4R-205ENST00000469601 USP47Q96K76 1375 aa29.9■■■□□ 2.38
RTN4R-205ENST00000469601 SLC12A5Q9H2X9 1139 aa29.89■■■□□ 2.38
RTN4R-205ENST00000469601 AATKQ6ZMQ8 1374 aa29.89■■■□□ 2.37
RTN4R-205ENST00000469601 PIK3C2AO00443 1686 aa29.88■■■□□ 2.37
RTN4R-205ENST00000469601 CCER1Q8TC90 406 aaPredicted RBP29.88■■■□□ 2.37
RTN4R-205ENST00000469601 CAMTA1Q9Y6Y1 1673 aa29.87■■■□□ 2.37
RTN4R-205ENST00000469601 ZBTB7CA1YPR0 619 aa29.86■■■□□ 2.37
RTN4R-205ENST00000469601 TMF1P82094 1093 aa29.86■■■□□ 2.37
RTN4R-205ENST00000469601 BLMP54132 1417 aaPredicted RBP29.86■■■□□ 2.37
RTN4R-205ENST00000469601 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.85■■■□□ 2.37
RTN4R-205ENST00000469601 CD163L1Q9NR16 1453 aa29.85■■■□□ 2.37
RTN4R-205ENST00000469601 SF3B2Q13435 895 aaKnown RBP29.84■■■□□ 2.37
RTN4R-205ENST00000469601 LARP1Q6PKG0 1096 aaKnown RBP29.84■■■□□ 2.37
RTN4R-205ENST00000469601 LMO7Q8WWI1 1683 aa29.84■■■□□ 2.37
RTN4R-205ENST00000469601 EDC4Q6P2E9 1401 aaKnown RBP29.83■■■□□ 2.37
RTN4R-205ENST00000469601 BARGINQ6ZT62 677 aa29.83■■■□□ 2.37
RTN4R-205ENST00000469601 USP35Q9P2H5 1018 aa29.83■■■□□ 2.37
RTN4R-205ENST00000469601 THRAP3Q9Y2W1 955 aaKnown RBP29.83■■■□□ 2.37
RTN4R-205ENST00000469601 USP31Q70CQ4 1352 aa29.82■■■□□ 2.36
RTN4R-205ENST00000469601 CDCA8Q53HL2 280 aa29.82■■■□□ 2.36
RTN4R-205ENST00000469601 TCP11L2Q8N4U5 519 aa29.82■■■□□ 2.36
RTN4R-205ENST00000469601 MON2Q7Z3U7 1717 aa29.82■■■□□ 2.36
RTN4R-205ENST00000469601 COL5A2P05997 1499 aaPredicted RBP29.81■■■□□ 2.36
RTN4R-205ENST00000469601 ARHGEF25Q86VW2 580 aa29.81■■■□□ 2.36
RTN4R-205ENST00000469601 BRWD3Q6RI45 1802 aa29.8■■■□□ 2.36
RTN4R-205ENST00000469601 A0A1W2PP64 1363 aa29.8■■■□□ 2.36
RTN4R-205ENST00000469601 SOX12O15370 315 aa29.78■■■□□ 2.36
RTN4R-205ENST00000469601 NME9Q86XW9 330 aa29.78■■■□□ 2.36
RTN4R-205ENST00000469601 THSD7AQ9UPZ6 1657 aa29.78■■■□□ 2.36
RTN4R-205ENST00000469601 CRB1P82279 1406 aa29.77■■■□□ 2.36
RTN4R-205ENST00000469601 TOM1L2Q6ZVM7 507 aa29.73■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms