RNA–Protein interactions for RNA: ENST00000469211.1

TRO-219, Transcript of trophinin, humanhuman

TSL 2

Gene TRO, Length 842 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRO-219ENST00000469211 CARD14Q9BXL6 1004 aa13.35□□□□□ -0.27
TRO-219ENST00000469211 USP6P35125 1406 aa13.35□□□□□ -0.27
TRO-219ENST00000469211 EDC4Q6P2E9 1401 aaKnown RBP13.33□□□□□ -0.28
TRO-219ENST00000469211 ACEP12821 1306 aa13.33□□□□□ -0.28
TRO-219ENST00000469211 NPC1L1Q9UHC9 1359 aa13.32□□□□□ -0.28
TRO-219ENST00000469211 DIEXFQ68CQ4 756 aaKnown RBP13.32□□□□□ -0.28
TRO-219ENST00000469211 ORAI2Q96SN7 254 aa13.32□□□□□ -0.28
TRO-219ENST00000469211 TERF2IPQ9NYB0 399 aa13.32□□□□□ -0.28
TRO-219ENST00000469211 SLAIN2Q9P270 581 aa13.32□□□□□ -0.28
TRO-219ENST00000469211 PHF8Q9UPP1 1060 aa13.32□□□□□ -0.28
TRO-219ENST00000469211 PMFBP1Q8TBY8 1022 aa13.31□□□□□ -0.28
TRO-219ENST00000469211 KTN1Q86UP2 1357 aaKnown RBP13.31□□□□□ -0.28
TRO-219ENST00000469211 TRPM3Q9HCF6 1732 aaPredicted RBP13.3□□□□□ -0.28
TRO-219ENST00000469211 PXDNQ92626 1479 aa13.3□□□□□ -0.28
TRO-219ENST00000469211 ESCO1Q5FWF5 840 aa13.3□□□□□ -0.28
TRO-219ENST00000469211 BRINP3Q76B58 766 aa13.3□□□□□ -0.28
TRO-219ENST00000469211 HDGFL2Q7Z4V5 671 aaPredicted RBP13.3□□□□□ -0.28
TRO-219ENST00000469211 NHSL1Q5SYE7 1610 aa13.3□□□□□ -0.28
TRO-219ENST00000469211 COL16A1Q07092 1604 aaPredicted RBP13.29□□□□□ -0.28
TRO-219ENST00000469211 BRD4O60885 1362 aaPredicted RBP13.29□□□□□ -0.28
TRO-219ENST00000469211 PIK3C2AO00443 1686 aa13.28□□□□□ -0.28
TRO-219ENST00000469211 USP54Q70EL1 1684 aa13.28□□□□□ -0.28
TRO-219ENST00000469211 NSD2O96028 1365 aa13.28□□□□□ -0.28
TRO-219ENST00000469211 PARD3Q8TEW0 1356 aa13.28□□□□□ -0.28
TRO-219ENST00000469211 OVOS2A0A0J9YW53 1432 aa13.28□□□□□ -0.28
TRO-219ENST00000469211 OVOS2Q6IE36 1432 aa13.28□□□□□ -0.28
TRO-219ENST00000469211 AHDC1Q5TGY3 1603 aaPredicted RBP13.28□□□□□ -0.28
TRO-219ENST00000469211 PHLPP1O60346 1717 aa13.27□□□□□ -0.28
TRO-219ENST00000469211 ANKRD26Q9UPS8 1709 aa13.27□□□□□ -0.28
TRO-219ENST00000469211 KIF20BQ96Q89 1820 aa13.27□□□□□ -0.28
TRO-219ENST00000469211 NGDNQ8NEJ9 315 aaKnown RBP13.27□□□□□ -0.29
TRO-219ENST00000469211 ZNF692Q9BU19 519 aaPredicted RBP13.27□□□□□ -0.29
TRO-219ENST00000469211 TTC21BQ7Z4L5 1316 aa13.26□□□□□ -0.29
TRO-219ENST00000469211 KNSTRNQ9Y448 316 aa13.26□□□□□ -0.29
TRO-219ENST00000469211 MARF1Q9Y4F3 1742 aaKnown RBP13.25□□□□□ -0.29
TRO-219ENST00000469211 ALS2Q96Q42 1657 aa13.25□□□□□ -0.29
TRO-219ENST00000469211 CGNL1Q0VF96 1302 aa13.25□□□□□ -0.29
TRO-219ENST00000469211 NPHP3Q7Z494 1330 aa13.25□□□□□ -0.29
TRO-219ENST00000469211 USP31Q70CQ4 1352 aa13.24□□□□□ -0.29
TRO-219ENST00000469211 TTC21AQ8NDW8 1320 aa13.24□□□□□ -0.29
TRO-219ENST00000469211 FOXO3O43524 673 aa13.24□□□□□ -0.29
TRO-219ENST00000469211 PRKRIP1Q9H875 184 aaPredicted RBP13.24□□□□□ -0.29
TRO-219ENST00000469211 SBNO1A3KN83 1393 aa13.23□□□□□ -0.29
TRO-219ENST00000469211 SOS2Q07890 1332 aaPredicted RBP13.23□□□□□ -0.29
TRO-219ENST00000469211 FYB1O15117 783 aa13.23□□□□□ -0.29
TRO-219ENST00000469211 NME9Q86XW9 330 aa13.23□□□□□ -0.29
TRO-219ENST00000469211 DDX17Q92841 729 aaKnown RBP13.23□□□□□ -0.29
TRO-219ENST00000469211 RGS17Q9UGC6 210 aaPredicted RBP13.23□□□□□ -0.29
TRO-219ENST00000469211 TNS3Q68CZ2 1445 aa13.22□□□□□ -0.29
TRO-219ENST00000469211 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.22□□□□□ -0.29
TRO-219ENST00000469211 LRP6O75581 1613 aa13.21□□□□□ -0.29
TRO-219ENST00000469211 XPCQ01831 940 aaPredicted RBP13.21□□□□□ -0.29
TRO-219ENST00000469211 CC2D1BQ5T0F9 858 aaKnown RBP13.21□□□□□ -0.29
TRO-219ENST00000469211 KRT28Q7Z3Y7 464 aa13.21□□□□□ -0.29
TRO-219ENST00000469211 SLIT3O75094 1523 aa13.21□□□□□ -0.29
TRO-219ENST00000469211 JCADQ9P266 1359 aa13.2□□□□□ -0.3
TRO-219ENST00000469211 CRYBG1Q9Y4K1 1723 aa13.2□□□□□ -0.3
TRO-219ENST00000469211 ANP32CO43423 234 aa13.2□□□□□ -0.3
TRO-219ENST00000469211 PSME1Q06323 249 aa13.2□□□□□ -0.3
TRO-219ENST00000469211 GGNBP2Q9H3C7 697 aa13.2□□□□□ -0.3
TRO-219ENST00000469211 ZRANB1Q9UGI0 708 aa13.2□□□□□ -0.3
TRO-219ENST00000469211 RALBP1Q15311 655 aa13.19□□□□□ -0.3
TRO-219ENST00000469211 ATF5Q9Y2D1 282 aaPredicted RBP13.19□□□□□ -0.3
TRO-219ENST00000469211 SMG6Q86US8 1419 aaKnown RBP13.19□□□□□ -0.3
TRO-219ENST00000469211 NFAT5O94916 1531 aa13.18□□□□□ -0.3
TRO-219ENST00000469211 USP19O94966 1318 aa13.18□□□□□ -0.3
TRO-219ENST00000469211 SPATA31A3Q5VYP0 1347 aa13.18□□□□□ -0.3
TRO-219ENST00000469211 SAMD1Q6SPF0 538 aaPredicted RBP13.18□□□□□ -0.3
TRO-219ENST00000469211 MIER1Q8N108 512 aa13.18□□□□□ -0.3
TRO-219ENST00000469211 SHPRHQ149N8 1683 aa13.18□□□□□ -0.3
TRO-219ENST00000469211 PHRF1Q9P1Y6 1649 aaKnown RBP13.17□□□□□ -0.3
TRO-219ENST00000469211 AATKQ6ZMQ8 1374 aa13.17□□□□□ -0.3
TRO-219ENST00000469211 MYBBP1AQ9BQG0 1328 aaKnown RBP13.16□□□□□ -0.3
TRO-219ENST00000469211 SOCS7O14512 581 aa13.16□□□□□ -0.3
TRO-219ENST00000469211 ARHGEF10O15013 1369 aa13.16□□□□□ -0.3
TRO-219ENST00000469211 COL22A1Q8NFW1 1626 aaPredicted RBP13.16□□□□□ -0.3
TRO-219ENST00000469211 ABCA3Q99758 1704 aa13.16□□□□□ -0.3
TRO-219ENST00000469211 PAK3O75914 559 aaPredicted RBP13.15□□□□□ -0.3
TRO-219ENST00000469211 PPP2R1AP30153 589 aa13.15□□□□□ -0.3
TRO-219ENST00000469211 CNGB1Q14028 1251 aaPredicted RBP13.15□□□□□ -0.3
TRO-219ENST00000469211 MORC1Q86VD1 984 aa13.15□□□□□ -0.3
TRO-219ENST00000469211 COG3Q96JB2 828 aa13.15□□□□□ -0.3
TRO-219ENST00000469211 POTEAQ6S8J7 498 aa13.14□□□□□ -0.31
TRO-219ENST00000469211 ABTB2Q8N961 1025 aa13.14□□□□□ -0.31
TRO-219ENST00000469211 COL3A1P02461 1466 aaPredicted RBP13.14□□□□□ -0.31
TRO-219ENST00000469211 PNPLA6Q8IY17 1366 aa13.13□□□□□ -0.31
TRO-219ENST00000469211 NLRP6P59044 892 aa13.13□□□□□ -0.31
TRO-219ENST00000469211 NLRP13Q86W25 1043 aa13.13□□□□□ -0.31
TRO-219ENST00000469211 PEAK1Q9H792 1746 aa13.13□□□□□ -0.31
TRO-219ENST00000469211 CDK12Q9NYV4 1490 aaPredicted RBP13.12□□□□□ -0.31
TRO-219ENST00000469211 CCER2I3L3R5 266 aa13.12□□□□□ -0.31
TRO-219ENST00000469211 NUTM2GQ5VZR2 741 aa13.12□□□□□ -0.31
TRO-219ENST00000469211 SPATA31A6Q5VVP1 1343 aa13.12□□□□□ -0.31
TRO-219ENST00000469211 CCDC184Q52MB2 194 aa13.11□□□□□ -0.31
TRO-219ENST00000469211 FBLN1P23142 703 aa13.1□□□□□ -0.31
TRO-219ENST00000469211 TNNT2P45379 298 aaPredicted RBP13.1□□□□□ -0.31
TRO-219ENST00000469211 INSRP06213 1382 aa13.09□□□□□ -0.31
TRO-219ENST00000469211 POLKQ9UBT6 870 aa13.09□□□□□ -0.31
TRO-219ENST00000469211 MAP3K19Q56UN5 1328 aa13.09□□□□□ -0.31
TRO-219ENST00000469211 ABCC6O95255 1503 aa13.08□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms