RNA–Protein interactions for RNA: ENST00000468380.1

LINC00888-201, long intergenic non-protein coding RNA 888, humanhuman

TSL 2

Gene LINC00888, Length 1,241 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00888-201ENST00000468380 COL14A1Q05707 1796 aaKnown RBP27.76■■■□□ 2.03
LINC00888-201ENST00000468380 GPRASP1Q5JY77 1395 aa27.75■■■□□ 2.03
LINC00888-201ENST00000468380 EZH2Q15910 746 aaKnown RBP27.75■■■□□ 2.03
LINC00888-201ENST00000468380 MINK1Q8N4C8 1332 aaPredicted RBP27.74■■■□□ 2.03
LINC00888-201ENST00000468380 DISP2A7MBM2 1401 aa27.73■■■□□ 2.03
LINC00888-201ENST00000468380 ADGRB2O60241 1585 aa27.73■■■□□ 2.03
LINC00888-201ENST00000468380 RGPD1P0DJD0 1748 aa27.72■■■□□ 2.03
LINC00888-201ENST00000468380 ADGRB1O14514 1584 aa27.71■■■□□ 2.03
LINC00888-201ENST00000468380 CAMKK2Q96RR4 588 aa27.71■■■□□ 2.03
LINC00888-201ENST00000468380 THSD7AQ9UPZ6 1657 aa27.71■■■□□ 2.03
LINC00888-201ENST00000468380 WASLO00401 505 aaPredicted RBP27.7■■■□□ 2.02
LINC00888-201ENST00000468380 PAK3O75914 559 aaPredicted RBP27.7■■■□□ 2.02
LINC00888-201ENST00000468380 PRDM11Q9NQV5 511 aa27.7■■■□□ 2.02
LINC00888-201ENST00000468380 TRIM37O94972 964 aa27.69■■■□□ 2.02
LINC00888-201ENST00000468380 NGDNQ8NEJ9 315 aaKnown RBP27.69■■■□□ 2.02
LINC00888-201ENST00000468380 SPATA31A1Q5TZJ5 1347 aa27.68■■■□□ 2.02
LINC00888-201ENST00000468380 TNS1Q9HBL0 1735 aaKnown RBP27.67■■■□□ 2.02
LINC00888-201ENST00000468380 CHRNA2Q15822 529 aa27.67■■■□□ 2.02
LINC00888-201ENST00000468380 CRYBG1Q9Y4K1 1723 aa27.67■■■□□ 2.02
LINC00888-201ENST00000468380 TULP4Q9NRJ4 1543 aa27.66■■■□□ 2.02
LINC00888-201ENST00000468380 FAM196AQ6ZSG2 479 aa27.65■■■□□ 2.02
LINC00888-201ENST00000468380 KIAA0232Q92628 1395 aa27.64■■■□□ 2.02
LINC00888-201ENST00000468380 STRN4Q9NRL3 753 aa27.63■■■□□ 2.01
LINC00888-201ENST00000468380 KDM2AQ9Y2K7 1162 aa27.63■■■□□ 2.01
LINC00888-201ENST00000468380 EIF3AQ14152 1382 aaKnown RBP27.62■■■□□ 2.01
LINC00888-201ENST00000468380 APBA3O96018 575 aa27.62■■■□□ 2.01
LINC00888-201ENST00000468380 ZC3H6P61129 1189 aaKnown RBP27.61■■■□□ 2.01
LINC00888-201ENST00000468380 NUTM2GQ5VZR2 741 aa27.6■■■□□ 2.01
LINC00888-201ENST00000468380 USP35Q9P2H5 1018 aa27.59■■■□□ 2.01
LINC00888-201ENST00000468380 NUDT16Q96DE0 195 aaKnown RBP27.58■■■□□ 2.01
LINC00888-201ENST00000468380 DCAF11Q8TEB1 546 aa27.57■■■□□ 2
LINC00888-201ENST00000468380 BARGINQ6ZT62 677 aa27.54■■■□□ 2
LINC00888-201ENST00000468380 ATP7BP35670 1465 aa27.53■■■□□ 2
LINC00888-201ENST00000468380 PARD3Q8TEW0 1356 aa27.53■■■□□ 2
LINC00888-201ENST00000468380 EVA1CP58658 441 aa27.52■■■□□ 2
LINC00888-201ENST00000468380 PDE3BQ13370 1112 aa27.52■■■□□ 2
LINC00888-201ENST00000468380 LARP1Q6PKG0 1096 aaKnown RBP27.52■■■□□ 2
LINC00888-201ENST00000468380 CDK19Q9BWU1 502 aa27.51■■□□□ 1.99
LINC00888-201ENST00000468380 SSH2Q76I76 1423 aa27.5■■□□□ 1.99
LINC00888-201ENST00000468380 PHRF1Q9P1Y6 1649 aaKnown RBP27.49■■□□□ 1.99
LINC00888-201ENST00000468380 NBPF8Q3BBV2 869 aa27.49■■□□□ 1.99
LINC00888-201ENST00000468380 ACEP12821 1306 aa27.48■■□□□ 1.99
LINC00888-201ENST00000468380 CAMTA1Q9Y6Y1 1673 aa27.48■■□□□ 1.99
LINC00888-201ENST00000468380 TCP11L2Q8N4U5 519 aa27.47■■□□□ 1.99
LINC00888-201ENST00000468380 POLR3AO14802 1390 aaPredicted RBP27.47■■□□□ 1.99
LINC00888-201ENST00000468380 RAB3GAP2Q9H2M9 1393 aa27.47■■□□□ 1.99
LINC00888-201ENST00000468380 YY1P25490 414 aa27.46■■□□□ 1.99
LINC00888-201ENST00000468380 NBPF14Q5TI25 921 aa27.46■■□□□ 1.99
LINC00888-201ENST00000468380 RREB1Q92766 1687 aa27.46■■□□□ 1.99
LINC00888-201ENST00000468380 PLEKHG3A1L390 1219 aa27.44■■□□□ 1.98
LINC00888-201ENST00000468380 STAC3Q96MF2 364 aa27.44■■□□□ 1.98
LINC00888-201ENST00000468380 NUP188Q5SRE5 1749 aa27.44■■□□□ 1.98
LINC00888-201ENST00000468380 ABTB2Q8N961 1025 aa27.43■■□□□ 1.98
LINC00888-201ENST00000468380 CCDC61Q9Y6R9 512 aa27.43■■□□□ 1.98
LINC00888-201ENST00000468380 ITSN1Q15811 1721 aa27.43■■□□□ 1.98
LINC00888-201ENST00000468380 ARHGEF28Q8N1W1 1705 aaKnown RBP27.43■■□□□ 1.98
LINC00888-201ENST00000468380 CPDO75976 1380 aa27.41■■□□□ 1.98
LINC00888-201ENST00000468380 USP19O94966 1318 aa27.4■■□□□ 1.98
LINC00888-201ENST00000468380 KCNQ2O43526 872 aa27.39■■□□□ 1.98
LINC00888-201ENST00000468380 SPON1Q9HCB6 807 aa27.39■■□□□ 1.98
LINC00888-201ENST00000468380 THRAP3Q9Y2W1 955 aaKnown RBP27.39■■□□□ 1.98
LINC00888-201ENST00000468380 NRKQ7Z2Y5 1582 aa27.39■■□□□ 1.97
LINC00888-201ENST00000468380 LMO7Q8WWI1 1683 aa27.38■■□□□ 1.97
LINC00888-201ENST00000468380 GCP02774 474 aa27.37■■□□□ 1.97
LINC00888-201ENST00000468380 PPP1R1BQ9UD71 204 aaPredicted RBP27.35■■□□□ 1.97
LINC00888-201ENST00000468380 TOPAZ1Q8N9V7 1692 aa27.35■■□□□ 1.97
LINC00888-201ENST00000468380 NLRP13Q86W25 1043 aa27.33■■□□□ 1.97
LINC00888-201ENST00000468380 PTF1AQ7RTS3 328 aa27.32■■□□□ 1.96
LINC00888-201ENST00000468380 COL5A2P05997 1499 aaPredicted RBP27.32■■□□□ 1.96
LINC00888-201ENST00000468380 PARP4Q9UKK3 1724 aaKnown RBP27.3■■□□□ 1.96
LINC00888-201ENST00000468380 PLSCR1O15162 318 aa27.29■■□□□ 1.96
LINC00888-201ENST00000468380 NBPF1Q3BBV0 1214 aa27.29■■□□□ 1.96
LINC00888-201ENST00000468380 PDGFDQ9GZP0 370 aaPredicted RBP27.29■■□□□ 1.96
LINC00888-201ENST00000468380 ANO8Q9HCE9 1232 aaPredicted RBP27.29■■□□□ 1.96
LINC00888-201ENST00000468380 NINLQ9Y2I6 1382 aa27.28■■□□□ 1.96
LINC00888-201ENST00000468380 CRB1P82279 1406 aa27.27■■□□□ 1.96
LINC00888-201ENST00000468380 C11orf95C9JLR9 678 aaPredicted RBP27.27■■□□□ 1.96
LINC00888-201ENST00000468380 PROM2Q8N271 834 aa27.27■■□□□ 1.96
LINC00888-201ENST00000468380 PEAK1Q9H792 1746 aa27.27■■□□□ 1.96
LINC00888-201ENST00000468380 ZBTB7CA1YPR0 619 aa27.26■■□□□ 1.95
LINC00888-201ENST00000468380 CABP2Q9NPB3 220 aa27.26■■□□□ 1.95
LINC00888-201ENST00000468380 OVOS2A0A0G2JMS6 1433 aa27.25■■□□□ 1.95
LINC00888-201ENST00000468380 OVOS2A0A0J9YW53 1432 aa27.25■■□□□ 1.95
LINC00888-201ENST00000468380 OVOS2Q6IE36 1432 aa27.25■■□□□ 1.95
LINC00888-201ENST00000468380 PPIP5K1Q6PFW1 1433 aa27.25■■□□□ 1.95
LINC00888-201ENST00000468380 SRPK2P78362 688 aaKnown RBP27.25■■□□□ 1.95
LINC00888-201ENST00000468380 DCAF8L1A6NGE4 600 aa27.23■■□□□ 1.95
LINC00888-201ENST00000468380 DDB1Q16531 1140 aa27.23■■□□□ 1.95
LINC00888-201ENST00000468380 BCL11BQ9C0K0 894 aaPredicted RBP27.23■■□□□ 1.95
LINC00888-201ENST00000468380 AATKQ6ZMQ8 1374 aa27.22■■□□□ 1.95
LINC00888-201ENST00000468380 AXIN2Q9Y2T1 843 aa27.22■■□□□ 1.95
LINC00888-201ENST00000468380 SBF2Q86WG5 1849 aa27.22■■□□□ 1.95
LINC00888-201ENST00000468380 NLRP6P59044 892 aa27.21■■□□□ 1.95
LINC00888-201ENST00000468380 MARCH10Q8NA82 808 aaPredicted RBP27.21■■□□□ 1.95
LINC00888-201ENST00000468380 TOM1L2Q6ZVM7 507 aa27.2■■□□□ 1.94
LINC00888-201ENST00000468380 CABP1Q9NZU7 370 aa27.2■■□□□ 1.94
LINC00888-201ENST00000468380 ZBTB7AO95365 584 aa27.18■■□□□ 1.94
LINC00888-201ENST00000468380 LRRC37A3O60309 1634 aa27.18■■□□□ 1.94
LINC00888-201ENST00000468380 CASZ1Q86V15 1759 aa27.17■■□□□ 1.94
LINC00888-201ENST00000468380 PTGER2P43116 358 aa27.17■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms