RNA–Protein interactions for RNA: ENST00000467533.5

HDAC3-203, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-203ENST00000467533 CRYBG1Q9Y4K1 1723 aa15.63■□□□□ 0.09
HDAC3-203ENST00000467533 KCNQ2O43526 872 aa15.62■□□□□ 0.09
HDAC3-203ENST00000467533 NRKQ7Z2Y5 1582 aa15.62■□□□□ 0.09
HDAC3-203ENST00000467533 ABCC11Q96J66 1382 aa15.62■□□□□ 0.09
HDAC3-203ENST00000467533 ADGRF5Q8IZF2 1346 aa15.59■□□□□ 0.09
HDAC3-203ENST00000467533 YTHDC2Q9H6S0 1430 aaKnown RBP15.59■□□□□ 0.09
HDAC3-203ENST00000467533 MYOM1P52179 1685 aa15.58■□□□□ 0.08
HDAC3-203ENST00000467533 TMEM132EQ6IEE7 984 aa15.58■□□□□ 0.08
HDAC3-203ENST00000467533 CASZ1Q86V15 1759 aa15.57■□□□□ 0.08
HDAC3-203ENST00000467533 C1QTNF8P60827 252 aa15.57■□□□□ 0.08
HDAC3-203ENST00000467533 PMFBP1Q8TBY8 1022 aa15.57■□□□□ 0.08
HDAC3-203ENST00000467533 CHD4Q14839 1912 aa15.56■□□□□ 0.08
HDAC3-203ENST00000467533 PRDM11Q9NQV5 511 aa15.56■□□□□ 0.08
HDAC3-203ENST00000467533 SPATA31A1Q5TZJ5 1347 aa15.56■□□□□ 0.08
HDAC3-203ENST00000467533 PHRF1Q9P1Y6 1649 aaKnown RBP15.55■□□□□ 0.08
HDAC3-203ENST00000467533 RGPD3A6NKT7 1758 aaPredicted RBP15.54■□□□□ 0.08
HDAC3-203ENST00000467533 RGPD4Q7Z3J3 1758 aa15.54■□□□□ 0.08
HDAC3-203ENST00000467533 ANKARQ7Z5J8 1434 aa15.54■□□□□ 0.08
HDAC3-203ENST00000467533 PDE3BQ13370 1112 aa15.54■□□□□ 0.08
HDAC3-203ENST00000467533 PIK3C2GO75747 1445 aa15.53■□□□□ 0.08
HDAC3-203ENST00000467533 GPRASP1Q5JY77 1395 aa15.53■□□□□ 0.08
HDAC3-203ENST00000467533 STRN4Q9NRL3 753 aa15.53■□□□□ 0.08
HDAC3-203ENST00000467533 USP35Q9P2H5 1018 aa15.52■□□□□ 0.08
HDAC3-203ENST00000467533 ANKRD30BQ9BXX2 1392 aa15.51■□□□□ 0.07
HDAC3-203ENST00000467533 SAFB2Q14151 953 aaKnown RBP eCLIP15.51■□□□□ 0.07
HDAC3-203ENST00000467533 KIAA0232Q92628 1395 aa15.5■□□□□ 0.07
HDAC3-203ENST00000467533 RGL3Q3MIN7 710 aa15.5■□□□□ 0.07
HDAC3-203ENST00000467533 CHRNA2Q15822 529 aa15.49■□□□□ 0.07
HDAC3-203ENST00000467533 SIRT1Q96EB6 747 aa15.49■□□□□ 0.07
HDAC3-203ENST00000467533 PARP4Q9UKK3 1724 aaKnown RBP15.48■□□□□ 0.07
HDAC3-203ENST00000467533 ACIN1Q9UKV3 1341 aaKnown RBP15.48■□□□□ 0.07
HDAC3-203ENST00000467533 SLC4A1APQ9BWU0 796 aaKnown RBP15.48■□□□□ 0.07
HDAC3-203ENST00000467533 PAK3O75914 559 aaPredicted RBP15.47■□□□□ 0.07
HDAC3-203ENST00000467533 SSH2Q76I76 1423 aa15.47■□□□□ 0.07
HDAC3-203ENST00000467533 PRAM1Q96QH2 718 aa15.47■□□□□ 0.07
HDAC3-203ENST00000467533 SPATA31E1Q6ZUB1 1445 aa15.46■□□□□ 0.07
HDAC3-203ENST00000467533 SBF2Q86WG5 1849 aa15.46■□□□□ 0.07
HDAC3-203ENST00000467533 ZBTB7AO95365 584 aa15.46■□□□□ 0.07
HDAC3-203ENST00000467533 BARGINQ6ZT62 677 aa15.46■□□□□ 0.07
HDAC3-203ENST00000467533 ANO8Q9HCE9 1232 aaPredicted RBP15.46■□□□□ 0.07
HDAC3-203ENST00000467533 DHX57Q6P158 1386 aaKnown RBP15.46■□□□□ 0.07
HDAC3-203ENST00000467533 DLC1Q96QB1 1528 aa15.45■□□□□ 0.06
HDAC3-203ENST00000467533 TULP4Q9NRJ4 1543 aa15.45■□□□□ 0.06
HDAC3-203ENST00000467533 EIF3AQ14152 1382 aaKnown RBP15.45■□□□□ 0.06
HDAC3-203ENST00000467533 ITSN1Q15811 1721 aa15.45■□□□□ 0.06
HDAC3-203ENST00000467533 PEAK1Q9H792 1746 aa15.44■□□□□ 0.06
HDAC3-203ENST00000467533 GIGYF1O75420 1035 aaPredicted RBP15.44■□□□□ 0.06
HDAC3-203ENST00000467533 EVA1CP58658 441 aa15.44■□□□□ 0.06
HDAC3-203ENST00000467533 POGKQ9P215 609 aa15.44■□□□□ 0.06
HDAC3-203ENST00000467533 OVOS2A0A0G2JMS6 1433 aa15.43■□□□□ 0.06
HDAC3-203ENST00000467533 OVOS2A0A0J9YW53 1432 aa15.43■□□□□ 0.06
HDAC3-203ENST00000467533 OVOS2Q6IE36 1432 aa15.43■□□□□ 0.06
HDAC3-203ENST00000467533 ZC3H6P61129 1189 aaKnown RBP15.43■□□□□ 0.06
HDAC3-203ENST00000467533 FHDC1Q9C0D6 1143 aaPredicted RBP15.43■□□□□ 0.06
HDAC3-203ENST00000467533 PDGFDQ9GZP0 370 aaPredicted RBP15.43■□□□□ 0.06
HDAC3-203ENST00000467533 ATP7BP35670 1465 aa15.42■□□□□ 0.06
HDAC3-203ENST00000467533 PTGER2P43116 358 aa15.42■□□□□ 0.06
HDAC3-203ENST00000467533 TCP11L2Q8N4U5 519 aa15.42■□□□□ 0.06
HDAC3-203ENST00000467533 NGDNQ8NEJ9 315 aaKnown RBP15.42■□□□□ 0.06
HDAC3-203ENST00000467533 ATF5Q9Y2D1 282 aaPredicted RBP15.42■□□□□ 0.06
HDAC3-203ENST00000467533 LRRC37A3O60309 1634 aa15.42■□□□□ 0.06
HDAC3-203ENST00000467533 LMO7Q8WWI1 1683 aa15.41■□□□□ 0.06
HDAC3-203ENST00000467533 SYT17Q9BSW7 474 aa15.41■□□□□ 0.06
HDAC3-203ENST00000467533 HIRIP3Q9BW71 556 aaPredicted RBP15.41■□□□□ 0.06
HDAC3-203ENST00000467533 BCL11BQ9C0K0 894 aaPredicted RBP15.41■□□□□ 0.06
HDAC3-203ENST00000467533 PRR36Q9H6K5 1346 aa15.41■□□□□ 0.06
HDAC3-203ENST00000467533 C11orf95C9JLR9 678 aaPredicted RBP15.4■□□□□ 0.06
HDAC3-203ENST00000467533 LARP1Q6PKG0 1096 aaKnown RBP15.4■□□□□ 0.06
HDAC3-203ENST00000467533 PLSCR1O15162 318 aa15.39■□□□□ 0.05
HDAC3-203ENST00000467533 CFAP70Q5T0N1 1121 aa15.39■□□□□ 0.05
HDAC3-203ENST00000467533 C14orf93Q9H972 538 aaKnown RBP15.39■□□□□ 0.05
HDAC3-203ENST00000467533 AKAP12Q02952 1782 aa15.39■□□□□ 0.05
HDAC3-203ENST00000467533 UTRNP46939 3433 aa15.38■□□□□ 0.05
HDAC3-203ENST00000467533 MINK1Q8N4C8 1332 aaPredicted RBP15.38■□□□□ 0.05
HDAC3-203ENST00000467533 NUTM2GQ5VZR2 741 aa15.37■□□□□ 0.05
HDAC3-203ENST00000467533 THRAP3Q9Y2W1 955 aaKnown RBP15.37■□□□□ 0.05
HDAC3-203ENST00000467533 WNK3Q9BYP7 1800 aa15.37■□□□□ 0.05
HDAC3-203ENST00000467533 STK32BQ9NY57 414 aa15.36■□□□□ 0.05
HDAC3-203ENST00000467533 SHANK3Q9BYB0 1731 aa15.35■□□□□ 0.05
HDAC3-203ENST00000467533 COL5A2P05997 1499 aaPredicted RBP15.34■□□□□ 0.05
HDAC3-203ENST00000467533 MTFR1LQ9H019 292 aa15.34■□□□□ 0.05
HDAC3-203ENST00000467533 CEP350Q5VT06 3117 aa15.33■□□□□ 0.05
HDAC3-203ENST00000467533 WASLO00401 505 aaPredicted RBP15.33■□□□□ 0.04
HDAC3-203ENST00000467533 GPR162Q16538 588 aa15.33■□□□□ 0.04
HDAC3-203ENST00000467533 PPARGC1BQ86YN6 1023 aaKnown RBP15.33■□□□□ 0.04
HDAC3-203ENST00000467533 CRB1P82279 1406 aa15.33■□□□□ 0.04
HDAC3-203ENST00000467533 ADGRB1O14514 1584 aa15.32■□□□□ 0.04
HDAC3-203ENST00000467533 PTF1AQ7RTS3 328 aa15.32■□□□□ 0.04
HDAC3-203ENST00000467533 TRAK1Q9UPV9 953 aa15.32■□□□□ 0.04
HDAC3-203ENST00000467533 CPDO75976 1380 aa15.32■□□□□ 0.04
HDAC3-203ENST00000467533 TOPAZ1Q8N9V7 1692 aa15.32■□□□□ 0.04
HDAC3-203ENST00000467533 SLC15A2Q16348 729 aa15.31■□□□□ 0.04
HDAC3-203ENST00000467533 DDB1Q16531 1140 aa15.31■□□□□ 0.04
HDAC3-203ENST00000467533 ARXQ96QS3 562 aa15.31■□□□□ 0.04
HDAC3-203ENST00000467533 MAP3K5Q99683 1374 aa15.31■□□□□ 0.04
HDAC3-203ENST00000467533 PROM2Q8N271 834 aa15.3■□□□□ 0.04
HDAC3-203ENST00000467533 SGIP1Q9BQI5 828 aa15.3■□□□□ 0.04
HDAC3-203ENST00000467533 TXNRD1Q16881 649 aa15.29■□□□□ 0.04
HDAC3-203ENST00000467533 PELP1Q8IZL8 1130 aaKnown RBP15.29■□□□□ 0.04
HDAC3-203ENST00000467533 KLHL34Q8N239 644 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms