RNA–Protein interactions for RNA: ENST00000467318.5

DDX56-208, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,665 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-208ENST00000467318 SSH2Q76I76 1423 aa20.21■□□□□ 0.83
DDX56-208ENST00000467318 TTC21BQ7Z4L5 1316 aa20.21■□□□□ 0.83
DDX56-208ENST00000467318 TTC21AQ8NDW8 1320 aa20.21■□□□□ 0.83
DDX56-208ENST00000467318 PXDNQ92626 1479 aa20.21■□□□□ 0.83
DDX56-208ENST00000467318 SBNO1A3KN83 1393 aa20.2■□□□□ 0.82
DDX56-208ENST00000467318 NSD3Q9BZ95 1437 aa20.2■□□□□ 0.82
DDX56-208ENST00000467318 PAK3O75914 559 aaPredicted RBP20.19■□□□□ 0.82
DDX56-208ENST00000467318 CGNL1Q0VF96 1302 aa20.19■□□□□ 0.82
DDX56-208ENST00000467318 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.18■□□□□ 0.82
DDX56-208ENST00000467318 LRRC59Q96AG4 307 aaKnown RBP20.18■□□□□ 0.82
DDX56-208ENST00000467318 SPATA31A3Q5VYP0 1347 aa20.16■□□□□ 0.82
DDX56-208ENST00000467318 NRKQ7Z2Y5 1582 aa20.16■□□□□ 0.82
DDX56-208ENST00000467318 ABTB2Q8N961 1025 aa20.16■□□□□ 0.82
DDX56-208ENST00000467318 FBXO41Q8TF61 875 aa20.16■□□□□ 0.82
DDX56-208ENST00000467318 TRPM3Q9HCF6 1732 aaPredicted RBP20.15■□□□□ 0.82
DDX56-208ENST00000467318 TNS3Q68CZ2 1445 aa20.15■□□□□ 0.82
DDX56-208ENST00000467318 FYB1O15117 783 aa20.14■□□□□ 0.81
DDX56-208ENST00000467318 AMER1Q5JTC6 1135 aaPredicted RBP20.14■□□□□ 0.81
DDX56-208ENST00000467318 ARHGEF10O15013 1369 aa20.14■□□□□ 0.81
DDX56-208ENST00000467318 NPC1L1Q9UHC9 1359 aa20.14■□□□□ 0.81
DDX56-208ENST00000467318 PHLPP1O60346 1717 aa20.14■□□□□ 0.81
DDX56-208ENST00000467318 HSPA1LP34931 641 aa20.13■□□□□ 0.81
DDX56-208ENST00000467318 NSD2O96028 1365 aa20.13■□□□□ 0.81
DDX56-208ENST00000467318 LMOD2Q6P5Q4 547 aa20.13■□□□□ 0.81
DDX56-208ENST00000467318 NLRP13Q86W25 1043 aa20.12■□□□□ 0.81
DDX56-208ENST00000467318 NME9Q86XW9 330 aa20.12■□□□□ 0.81
DDX56-208ENST00000467318 COL16A1Q07092 1604 aaPredicted RBP20.12■□□□□ 0.81
DDX56-208ENST00000467318 NLRP6P59044 892 aa20.11■□□□□ 0.81
DDX56-208ENST00000467318 USP31Q70CQ4 1352 aa20.11■□□□□ 0.81
DDX56-208ENST00000467318 ALS2Q96Q42 1657 aa20.1■□□□□ 0.81
DDX56-208ENST00000467318 PLEKHG5O94827 1062 aa20.1■□□□□ 0.81
DDX56-208ENST00000467318 COG3Q96JB2 828 aa20.1■□□□□ 0.81
DDX56-208ENST00000467318 NUTM2GQ5VZR2 741 aa20.09■□□□□ 0.81
DDX56-208ENST00000467318 GGNBP2Q9H3C7 697 aa20.09■□□□□ 0.81
DDX56-208ENST00000467318 PIK3C2AO00443 1686 aa20.08■□□□□ 0.8
DDX56-208ENST00000467318 ZRANB1Q9UGI0 708 aa20.07■□□□□ 0.8
DDX56-208ENST00000467318 CC2D1BQ5T0F9 858 aaKnown RBP20.07■□□□□ 0.8
DDX56-208ENST00000467318 KIF20BQ96Q89 1820 aa20.06■□□□□ 0.8
DDX56-208ENST00000467318 OVOS2A0A0J9YW53 1432 aa20.06■□□□□ 0.8
DDX56-208ENST00000467318 OVOS2Q6IE36 1432 aa20.06■□□□□ 0.8
DDX56-208ENST00000467318 JCADQ9P266 1359 aa20.05■□□□□ 0.8
DDX56-208ENST00000467318 MIER1Q8N108 512 aa20.05■□□□□ 0.8
DDX56-208ENST00000467318 MORC1Q86VD1 984 aa20.04■□□□□ 0.8
DDX56-208ENST00000467318 KCNH5Q8NCM2 988 aa20.04■□□□□ 0.8
DDX56-208ENST00000467318 USP19O94966 1318 aa20.04■□□□□ 0.8
DDX56-208ENST00000467318 PNPLA6Q8IY17 1366 aa20.04■□□□□ 0.8
DDX56-208ENST00000467318 USP54Q70EL1 1684 aa20.04■□□□□ 0.8
DDX56-208ENST00000467318 CNGB1Q14028 1251 aaPredicted RBP20.03■□□□□ 0.8
DDX56-208ENST00000467318 MED1Q15648 1581 aaPredicted RBP20.02■□□□□ 0.8
DDX56-208ENST00000467318 CABLES1Q8TDN4 633 aa20.02■□□□□ 0.8
DDX56-208ENST00000467318 ANKRD26Q9UPS8 1709 aa20.01■□□□□ 0.79
DDX56-208ENST00000467318 GCP02774 474 aa20.01■□□□□ 0.79
DDX56-208ENST00000467318 RALBP1Q15311 655 aa20.01■□□□□ 0.79
DDX56-208ENST00000467318 COL22A1Q8NFW1 1626 aaPredicted RBP20■□□□□ 0.79
DDX56-208ENST00000467318 ANP32CO43423 234 aa20■□□□□ 0.79
DDX56-208ENST00000467318 ILDR1Q86SU0 546 aaPredicted RBP20■□□□□ 0.79
DDX56-208ENST00000467318 PRKRIP1Q9H875 184 aaPredicted RBP20■□□□□ 0.79
DDX56-208ENST00000467318 SHPRHQ149N8 1683 aa20■□□□□ 0.79
DDX56-208ENST00000467318 MARF1Q9Y4F3 1742 aaKnown RBP19.99■□□□□ 0.79
DDX56-208ENST00000467318 SLIT3O75094 1523 aa19.99■□□□□ 0.79
DDX56-208ENST00000467318 PARD3Q8TEW0 1356 aa19.99■□□□□ 0.79
DDX56-208ENST00000467318 HAP1P54257 671 aaPredicted RBP19.99■□□□□ 0.79
DDX56-208ENST00000467318 SPATA31A6Q5VVP1 1343 aa19.98■□□□□ 0.79
DDX56-208ENST00000467318 PELP1Q8IZL8 1130 aaKnown RBP19.98■□□□□ 0.79
DDX56-208ENST00000467318 AATKQ6ZMQ8 1374 aa19.98■□□□□ 0.79
DDX56-208ENST00000467318 FBLN1P23142 703 aa19.97■□□□□ 0.79
DDX56-208ENST00000467318 SOX12O15370 315 aa19.96■□□□□ 0.79
DDX56-208ENST00000467318 TNNT2P45379 298 aaPredicted RBP19.96■□□□□ 0.79
DDX56-208ENST00000467318 CRYBG1Q9Y4K1 1723 aa19.94■□□□□ 0.78
DDX56-208ENST00000467318 PHRF1Q9P1Y6 1649 aaKnown RBP19.94■□□□□ 0.78
DDX56-208ENST00000467318 NFAT5O94916 1531 aa19.93■□□□□ 0.78
DDX56-208ENST00000467318 NUTM2BA6NNL0 878 aaPredicted RBP19.93■□□□□ 0.78
DDX56-208ENST00000467318 NUTM2EB1AL46 878 aaPredicted RBP19.93■□□□□ 0.78
DDX56-208ENST00000467318 ARHGEF25Q86VW2 580 aa19.93■□□□□ 0.78
DDX56-208ENST00000467318 NUTM2AQ8IVF1 878 aaPredicted RBP19.93■□□□□ 0.78
DDX56-208ENST00000467318 CPDO75976 1380 aa19.93■□□□□ 0.78
DDX56-208ENST00000467318 ABCA3Q99758 1704 aa19.92■□□□□ 0.78
DDX56-208ENST00000467318 ZC3H6P61129 1189 aaKnown RBP19.91■□□□□ 0.78
DDX56-208ENST00000467318 POLKQ9UBT6 870 aa19.91■□□□□ 0.78
DDX56-208ENST00000467318 GTF3C3Q9Y5Q9 886 aa19.91■□□□□ 0.78
DDX56-208ENST00000467318 KIF24Q5T7B8 1368 aa19.91■□□□□ 0.78
DDX56-208ENST00000467318 MYBBP1AQ9BQG0 1328 aaKnown RBP19.91■□□□□ 0.78
DDX56-208ENST00000467318 PPP2R1AP30153 589 aa19.91■□□□□ 0.78
DDX56-208ENST00000467318 RRS1Q15050 365 aaKnown RBP19.91■□□□□ 0.78
DDX56-208ENST00000467318 MAP3K19Q56UN5 1328 aa19.9■□□□□ 0.78
DDX56-208ENST00000467318 LRP6O75581 1613 aa19.89■□□□□ 0.78
DDX56-208ENST00000467318 KIAA0232Q92628 1395 aa19.89■□□□□ 0.77
DDX56-208ENST00000467318 PRDM11Q9NQV5 511 aa19.89■□□□□ 0.77
DDX56-208ENST00000467318 MAP2P11137 1827 aaKnown RBP19.89■□□□□ 0.77
DDX56-208ENST00000467318 AMPHP49418 695 aa19.88■□□□□ 0.77
DDX56-208ENST00000467318 MTHFSP49914 203 aa19.88■□□□□ 0.77
DDX56-208ENST00000467318 ADAMTS2O95450 1211 aa19.87■□□□□ 0.77
DDX56-208ENST00000467318 EMILIN1Q9Y6C2 1016 aa19.87■□□□□ 0.77
DDX56-208ENST00000467318 RTL1A6NKG5 1358 aa19.87■□□□□ 0.77
DDX56-208ENST00000467318 PPM1GO15355 546 aaPredicted RBP19.87■□□□□ 0.77
DDX56-208ENST00000467318 SMG6Q86US8 1419 aaKnown RBP19.87■□□□□ 0.77
DDX56-208ENST00000467318 FLT4P35916 1363 aa19.86■□□□□ 0.77
DDX56-208ENST00000467318 IP6K1Q92551 441 aa19.86■□□□□ 0.77
DDX56-208ENST00000467318 ZBTB7CA1YPR0 619 aa19.85■□□□□ 0.77
DDX56-208ENST00000467318 LTN1O94822 1766 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms