RNA–Protein interactions for RNA: ENST00000467263.1

SMC4-207, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-207ENST00000467263 MAP10Q9P2G4 905 aa10.3□□□□□ -0.76
SMC4-207ENST00000467263 SPDYE5A6NIY4 337 aa10.29□□□□□ -0.76
SMC4-207ENST00000467263 CAPN5O15484 640 aaPredicted RBP10.29□□□□□ -0.76
SMC4-207ENST00000467263 CSPP1Q1MSJ5 1256 aa10.29□□□□□ -0.76
SMC4-207ENST00000467263 PER1O15534 1290 aaPredicted RBP10.28□□□□□ -0.76
SMC4-207ENST00000467263 RIC3Q7Z5B4 369 aa10.28□□□□□ -0.76
SMC4-207ENST00000467263 AK7Q96M32 723 aa10.28□□□□□ -0.76
SMC4-207ENST00000467263 LIMD1Q9UGP4 676 aa10.28□□□□□ -0.76
SMC4-207ENST00000467263 CTHP32929 405 aa10.27□□□□□ -0.77
SMC4-207ENST00000467263 GJA5P36382 358 aa10.27□□□□□ -0.77
SMC4-207ENST00000467263 FOXJ1Q92949 421 aa10.27□□□□□ -0.77
SMC4-207ENST00000467263 F12P00748 615 aaPredicted RBP10.26□□□□□ -0.77
SMC4-207ENST00000467263 QPCTQ16769 361 aa10.26□□□□□ -0.77
SMC4-207ENST00000467263 WIPF1O43516 503 aa10.25□□□□□ -0.77
SMC4-207ENST00000467263 KIFC2Q96AC6 838 aa10.25□□□□□ -0.77
SMC4-207ENST00000467263 VARSP26640 1264 aaKnown RBP10.24□□□□□ -0.77
SMC4-207ENST00000467263 PDE4DQ08499 809 aa10.24□□□□□ -0.77
SMC4-207ENST00000467263 NNTQ13423 1086 aa10.24□□□□□ -0.77
SMC4-207ENST00000467263 C4orf48Q5BLP8 95 aa10.24□□□□□ -0.77
SMC4-207ENST00000467263 MYSM1Q5VVJ2 828 aa10.24□□□□□ -0.77
SMC4-207ENST00000467263 ZBTB3Q9H5J0 574 aa10.24□□□□□ -0.77
SMC4-207ENST00000467263 VEGFBP49765 207 aa10.23□□□□□ -0.77
SMC4-207ENST00000467263 ZFP42Q96MM3 310 aa10.23□□□□□ -0.77
SMC4-207ENST00000467263 SLC24A3Q9HC58 644 aa10.23□□□□□ -0.77
SMC4-207ENST00000467263 KLF16Q9BXK1 252 aaPredicted RBP10.22□□□□□ -0.77
SMC4-207ENST00000467263 TIMP2P16035 220 aa10.21□□□□□ -0.77
SMC4-207ENST00000467263 DIXDC1Q155Q3 683 aa10.21□□□□□ -0.77
SMC4-207ENST00000467263 PRPF38BQ5VTL8 546 aaKnown RBP10.2□□□□□ -0.78
SMC4-207ENST00000467263 MPNDQ8N594 471 aa10.2□□□□□ -0.78
SMC4-207ENST00000467263 TSC1Q92574 1164 aa10.2□□□□□ -0.78
SMC4-207ENST00000467263 RTL5Q5HYW3 569 aaPredicted RBP10.19□□□□□ -0.78
SMC4-207ENST00000467263 SOBPA7XYQ1 873 aa10.18□□□□□ -0.78
SMC4-207ENST00000467263 LILRB3O75022 631 aa10.18□□□□□ -0.78
SMC4-207ENST00000467263 NR3C2P08235 984 aa10.18□□□□□ -0.78
SMC4-207ENST00000467263 WDR4P57081 412 aaKnown RBP10.18□□□□□ -0.78
SMC4-207ENST00000467263 ARID5BQ14865 1188 aa10.18□□□□□ -0.78
SMC4-207ENST00000467263 NXF1Q9UBU9 619 aaKnown RBP10.18□□□□□ -0.78
SMC4-207ENST00000467263 PLEKHG3A1L390 1219 aa10.17□□□□□ -0.78
SMC4-207ENST00000467263 ADH1CP00326 375 aa10.17□□□□□ -0.78
SMC4-207ENST00000467263 FAM174AQ8TBP5 190 aa10.17□□□□□ -0.78
SMC4-207ENST00000467263 CDK15Q96Q40 435 aa10.17□□□□□ -0.78
SMC4-207ENST00000467263 PURBQ96QR8 312 aaKnown RBP10.17□□□□□ -0.78
SMC4-207ENST00000467263 ZFAND3Q9H8U3 227 aa10.17□□□□□ -0.78
SMC4-207ENST00000467263 MRPL14Q6P1L8 145 aaKnown RBP10.16□□□□□ -0.78
SMC4-207ENST00000467263 ERBB4Q15303 1308 aa10.15□□□□□ -0.78
SMC4-207ENST00000467263 NUTM2BA6NNL0 878 aaPredicted RBP10.15□□□□□ -0.78
SMC4-207ENST00000467263 NUTM2EB1AL46 878 aaPredicted RBP10.15□□□□□ -0.78
SMC4-207ENST00000467263 GMPRP36959 345 aa10.15□□□□□ -0.78
SMC4-207ENST00000467263 GRM5P41594 1212 aa10.15□□□□□ -0.78
SMC4-207ENST00000467263 NUTM2DQ5VT03 806 aaPredicted RBP10.15□□□□□ -0.78
SMC4-207ENST00000467263 NUTM2AQ8IVF1 878 aaPredicted RBP10.15□□□□□ -0.78
SMC4-207ENST00000467263 ITPKCQ96DU7 683 aa10.14□□□□□ -0.79
SMC4-207ENST00000467263 ZIC2O95409 532 aaPredicted RBP10.13□□□□□ -0.79
SMC4-207ENST00000467263 LORP23490 312 aaPredicted RBP10.13□□□□□ -0.79
SMC4-207ENST00000467263 INSM1Q01101 510 aaPredicted RBP10.13□□□□□ -0.79
SMC4-207ENST00000467263 AGERQ15109 404 aa10.13□□□□□ -0.79
SMC4-207ENST00000467263 FBXO31Q5XUX0 539 aaPredicted RBP10.13□□□□□ -0.79
SMC4-207ENST00000467263 POLR3EQ9NVU0 708 aa10.13□□□□□ -0.79
SMC4-207ENST00000467263 H3BM21 787 aa10.12□□□□□ -0.79
SMC4-207ENST00000467263 TUSC1Q2TAM9 212 aa10.12□□□□□ -0.79
SMC4-207ENST00000467263 STK17AQ9UEE5 414 aa10.12□□□□□ -0.79
SMC4-207ENST00000467263 CLK2P49760 499 aaKnown RBP10.1□□□□□ -0.79
SMC4-207ENST00000467263 SH3RF1Q7Z6J0 888 aa10.1□□□□□ -0.79
SMC4-207ENST00000467263 SLC16A10Q8TF71 515 aa10.1□□□□□ -0.79
SMC4-207ENST00000467263 C6orf118Q5T5N4 469 aa10.09□□□□□ -0.79
SMC4-207ENST00000467263 BPHLQ86WA6 291 aaPredicted RBP10.09□□□□□ -0.79
SMC4-207ENST00000467263 C1QTNF2Q9BXJ5 285 aa10.09□□□□□ -0.79
SMC4-207ENST00000467263 CTDSPL2Q05D32 466 aa10.08□□□□□ -0.8
SMC4-207ENST00000467263 SH3BP5LQ7L8J4 393 aa10.08□□□□□ -0.8
SMC4-207ENST00000467263 NR5A1Q13285 461 aa10.07□□□□□ -0.8
SMC4-207ENST00000467263 SCARF1Q14162 830 aa10.07□□□□□ -0.8
SMC4-207ENST00000467263 MAGEB6P1A0A0J9YX57 407 aa10.06□□□□□ -0.8
SMC4-207ENST00000467263 NPAS3Q8IXF0 933 aa10.06□□□□□ -0.8
SMC4-207ENST00000467263 IRF7Q92985 503 aa10.06□□□□□ -0.8
SMC4-207ENST00000467263 FSHRP23945 695 aa10.05□□□□□ -0.8
SMC4-207ENST00000467263 HELBQ8NG08 1087 aaPredicted RBP10.05□□□□□ -0.8
SMC4-207ENST00000467263 LRRN4Q8WUT4 740 aa10.05□□□□□ -0.8
SMC4-207ENST00000467263 CARD14Q9BXL6 1004 aa10.05□□□□□ -0.8
SMC4-207ENST00000467263 GPBP1L1Q9HC44 474 aaPredicted RBP10.04□□□□□ -0.8
SMC4-207ENST00000467263 MEIOBQ8N635 442 aa10.03□□□□□ -0.8
SMC4-207ENST00000467263 PROCA1Q8NCQ7 364 aaPredicted RBP10.03□□□□□ -0.8
SMC4-207ENST00000467263 VASH1Q7L8A9 365 aaPredicted RBP10.02□□□□□ -0.81
SMC4-207ENST00000467263 ARMC2Q8NEN0 867 aa10.02□□□□□ -0.81
SMC4-207ENST00000467263 ERFEQ4G0M1 354 aa10.01□□□□□ -0.81
SMC4-207ENST00000467263 NBPF14Q5TI25 921 aa10.01□□□□□ -0.81
SMC4-207ENST00000467263 TRMT44Q8IYL2 757 aaKnown RBP10.01□□□□□ -0.81
SMC4-207ENST00000467263 LINC00528Q8N1L1 170 aa10.01□□□□□ -0.81
SMC4-207ENST00000467263 MAN1A2O60476 641 aa10□□□□□ -0.81
SMC4-207ENST00000467263 BMP2P12643 396 aa10□□□□□ -0.81
SMC4-207ENST00000467263 ZSCAN1Q8NBB4 408 aa10□□□□□ -0.81
SMC4-207ENST00000467263 FAM117AQ9C073 453 aa10□□□□□ -0.81
SMC4-207ENST00000467263 RSPH6AQ9H0K4 717 aa10□□□□□ -0.81
SMC4-207ENST00000467263 DNMT3LQ9UJW3 386 aa10□□□□□ -0.81
SMC4-207ENST00000467263 MAP4K5Q9Y4K4 846 aa10□□□□□ -0.81
SMC4-207ENST00000467263 CBLBQ13191 982 aa9.98□□□□□ -0.81
SMC4-207ENST00000467263 NR6A1Q15406 480 aa9.98□□□□□ -0.81
SMC4-207ENST00000467263 OCSTAMPQ9BR26 566 aa9.98□□□□□ -0.81
SMC4-207ENST00000467263 SOS2Q07890 1332 aaPredicted RBP9.98□□□□□ -0.81
SMC4-207ENST00000467263 KDM4CQ9H3R0 1056 aa9.97□□□□□ -0.81
SMC4-207ENST00000467263 PPFIA3O75145 1194 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms