RNA–Protein interactions for RNA: ENST00000467062.5

SNAPC3-205, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-205ENST00000467062 PRDM4Q9UKN5 801 aa22.84■■□□□ 1.25
SNAPC3-205ENST00000467062 FYB1O15117 783 aa22.83■■□□□ 1.25
SNAPC3-205ENST00000467062 SLKQ9H2G2 1235 aaPredicted RBP22.83■■□□□ 1.25
SNAPC3-205ENST00000467062 CABP1Q9NZU7 370 aa22.83■■□□□ 1.25
SNAPC3-205ENST00000467062 AAMPQ13685 434 aa22.83■■□□□ 1.24
SNAPC3-205ENST00000467062 MYH16Q9H6N6 1097 aa22.82■■□□□ 1.24
SNAPC3-205ENST00000467062 A0A0U1RQG5 324 aaPredicted RBP22.81■■□□□ 1.24
SNAPC3-205ENST00000467062 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.81■■□□□ 1.24
SNAPC3-205ENST00000467062 NGEFQ8N5V2 710 aa22.81■■□□□ 1.24
SNAPC3-205ENST00000467062 CDK19Q9BWU1 502 aa22.81■■□□□ 1.24
SNAPC3-205ENST00000467062 PIK3C2BO00750 1634 aa22.81■■□□□ 1.24
SNAPC3-205ENST00000467062 PHF23Q9BUL5 403 aaPredicted RBP22.81■■□□□ 1.24
SNAPC3-205ENST00000467062 ZC3H13Q5T200 1668 aaKnown RBP22.8■■□□□ 1.24
SNAPC3-205ENST00000467062 ARHGAP31Q2M1Z3 1444 aa22.8■■□□□ 1.24
SNAPC3-205ENST00000467062 ANTXR1Q9H6X2 564 aa22.8■■□□□ 1.24
SNAPC3-205ENST00000467062 SHPRHQ149N8 1683 aa22.8■■□□□ 1.24
SNAPC3-205ENST00000467062 PDE3AQ14432 1141 aa22.79■■□□□ 1.24
SNAPC3-205ENST00000467062 VIRMAQ69YN4 1812 aaKnown RBP22.79■■□□□ 1.24
SNAPC3-205ENST00000467062 USP19O94966 1318 aa22.78■■□□□ 1.24
SNAPC3-205ENST00000467062 ISY1Q9ULR0 285 aaKnown RBP22.78■■□□□ 1.24
SNAPC3-205ENST00000467062 WDR63Q8IWG1 891 aa22.78■■□□□ 1.24
SNAPC3-205ENST00000467062 ARHGEF28Q8N1W1 1705 aaKnown RBP22.77■■□□□ 1.24
SNAPC3-205ENST00000467062 TRIM44Q96DX7 344 aaPredicted RBP22.76■■□□□ 1.23
SNAPC3-205ENST00000467062 PUS7Q96PZ0 661 aaKnown RBP22.76■■□□□ 1.23
SNAPC3-205ENST00000467062 TERF2IPQ9NYB0 399 aa22.76■■□□□ 1.23
SNAPC3-205ENST00000467062 RICTORQ6R327 1708 aa22.76■■□□□ 1.23
SNAPC3-205ENST00000467062 YTHDC2Q9H6S0 1430 aaKnown RBP22.76■■□□□ 1.23
SNAPC3-205ENST00000467062 PCDHB15Q9Y5E8 787 aa22.76■■□□□ 1.23
SNAPC3-205ENST00000467062 FGD1P98174 961 aa22.75■■□□□ 1.23
SNAPC3-205ENST00000467062 MCM4P33991 863 aa22.74■■□□□ 1.23
SNAPC3-205ENST00000467062 ABCC11Q96J66 1382 aa22.74■■□□□ 1.23
SNAPC3-205ENST00000467062 IQSEC2Q5JU85 1478 aa22.74■■□□□ 1.23
SNAPC3-205ENST00000467062 MYO5BQ9ULV0 1848 aa22.74■■□□□ 1.23
SNAPC3-205ENST00000467062 GZF1Q9H116 711 aaPredicted RBP22.73■■□□□ 1.23
SNAPC3-205ENST00000467062 PTPRMP28827 1452 aa22.73■■□□□ 1.23
SNAPC3-205ENST00000467062 PLEKHF1Q96S99 279 aa22.73■■□□□ 1.23
SNAPC3-205ENST00000467062 MAP7D2Q96T17 732 aa22.73■■□□□ 1.23
SNAPC3-205ENST00000467062 TMPOP42166 694 aaKnown RBP22.72■■□□□ 1.23
SNAPC3-205ENST00000467062 GRPEL1Q9HAV7 217 aa22.72■■□□□ 1.23
SNAPC3-205ENST00000467062 EXOSC9Q06265 439 aaKnown RBP22.72■■□□□ 1.23
SNAPC3-205ENST00000467062 ERBB4Q15303 1308 aa22.71■■□□□ 1.23
SNAPC3-205ENST00000467062 TRIM35Q9UPQ4 493 aa22.71■■□□□ 1.23
SNAPC3-205ENST00000467062 ZFYVE9O95405 1425 aa22.71■■□□□ 1.23
SNAPC3-205ENST00000467062 CCDC27Q2M243 656 aa22.71■■□□□ 1.23
SNAPC3-205ENST00000467062 NCKAP5LQ9HCH0 1330 aa22.7■■□□□ 1.22
SNAPC3-205ENST00000467062 HDGFL2Q7Z4V5 671 aaPredicted RBP22.7■■□□□ 1.22
SNAPC3-205ENST00000467062 NSD2O96028 1365 aa22.7■■□□□ 1.22
SNAPC3-205ENST00000467062 SEC24BO95487 1268 aa22.69■■□□□ 1.22
SNAPC3-205ENST00000467062 RIPK4P57078 832 aa22.69■■□□□ 1.22
SNAPC3-205ENST00000467062 TMEM131LA2VDJ0 1609 aa22.69■■□□□ 1.22
SNAPC3-205ENST00000467062 MAPK8IP3Q9UPT6 1336 aa22.69■■□□□ 1.22
SNAPC3-205ENST00000467062 TRAK2O60296 914 aa22.69■■□□□ 1.22
SNAPC3-205ENST00000467062 CD163L1Q9NR16 1453 aa22.68■■□□□ 1.22
SNAPC3-205ENST00000467062 KIAA1211Q6ZU35 1233 aa22.68■■□□□ 1.22
SNAPC3-205ENST00000467062 ATAD2Q6PL18 1390 aa22.68■■□□□ 1.22
SNAPC3-205ENST00000467062 DIAPH1O60610 1272 aaKnown RBP22.67■■□□□ 1.22
SNAPC3-205ENST00000467062 ZRANB1Q9UGI0 708 aa22.67■■□□□ 1.22
SNAPC3-205ENST00000467062 PREX1Q8TCU6 1659 aa22.66■■□□□ 1.22
SNAPC3-205ENST00000467062 TXNDC2Q86VQ3 553 aa22.66■■□□□ 1.22
SNAPC3-205ENST00000467062 SMC4Q9NTJ3 1288 aa22.66■■□□□ 1.22
SNAPC3-205ENST00000467062 TSPOAP1O95153 1857 aa22.66■■□□□ 1.22
SNAPC3-205ENST00000467062 HMOX1P09601 288 aa22.65■■□□□ 1.22
SNAPC3-205ENST00000467062 TERF1P54274 439 aa22.65■■□□□ 1.22
SNAPC3-205ENST00000467062 UPF2Q9HAU5 1272 aaKnown RBP22.65■■□□□ 1.22
SNAPC3-205ENST00000467062 FTSJ3Q8IY81 847 aaKnown RBP22.64■■□□□ 1.22
SNAPC3-205ENST00000467062 SSH1Q8WYL5 1049 aa22.64■■□□□ 1.22
SNAPC3-205ENST00000467062 ALKQ9UM73 1620 aa22.63■■□□□ 1.21
SNAPC3-205ENST00000467062 USP32Q8NFA0 1604 aa22.63■■□□□ 1.21
SNAPC3-205ENST00000467062 THUMPD2Q9BTF0 503 aaKnown RBP22.62■■□□□ 1.21
SNAPC3-205ENST00000467062 POLKQ9UBT6 870 aa22.62■■□□□ 1.21
SNAPC3-205ENST00000467062 EMILIN1Q9Y6C2 1016 aa22.62■■□□□ 1.21
SNAPC3-205ENST00000467062 ZKSCAN2Q63HK3 967 aa22.61■■□□□ 1.21
SNAPC3-205ENST00000467062 SMAP1Q8IYB5 467 aaPredicted RBP22.61■■□□□ 1.21
SNAPC3-205ENST00000467062 TBC1D2Q9BYX2 928 aa22.61■■□□□ 1.21
SNAPC3-205ENST00000467062 TRIM27P14373 513 aa22.6■■□□□ 1.21
SNAPC3-205ENST00000467062 PRKAR2BP31323 418 aa22.6■■□□□ 1.21
SNAPC3-205ENST00000467062 NME9Q86XW9 330 aa22.6■■□□□ 1.21
SNAPC3-205ENST00000467062 DZIP1LQ8IYY4 767 aaKnown RBP22.6■■□□□ 1.21
SNAPC3-205ENST00000467062 PDZRN3Q9UPQ7 1066 aa22.6■■□□□ 1.21
SNAPC3-205ENST00000467062 NINLQ9Y2I6 1382 aa22.6■■□□□ 1.21
SNAPC3-205ENST00000467062 NLRP1Q9C000 1473 aa22.6■■□□□ 1.21
SNAPC3-205ENST00000467062 PHACTR3Q96KR7 559 aa22.6■■□□□ 1.21
SNAPC3-205ENST00000467062 CHMP5Q9NZZ3 219 aa22.6■■□□□ 1.21
SNAPC3-205ENST00000467062 DDX11L8A8MPP1 907 aa22.59■■□□□ 1.21
SNAPC3-205ENST00000467062 MVPQ14764 893 aaKnown RBP22.59■■□□□ 1.21
SNAPC3-205ENST00000467062 NOB1Q9ULX3 412 aaKnown RBP22.59■■□□□ 1.21
SNAPC3-205ENST00000467062 ARHGEF40Q8TER5 1519 aa22.59■■□□□ 1.21
SNAPC3-205ENST00000467062 NUTM2FA1L443 756 aa22.59■■□□□ 1.21
SNAPC3-205ENST00000467062 ITPRIPQ8IWB1 547 aa22.58■■□□□ 1.21
SNAPC3-205ENST00000467062 OFD1O75665 1012 aa22.58■■□□□ 1.21
SNAPC3-205ENST00000467062 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.58■■□□□ 1.21
SNAPC3-205ENST00000467062 PMFBP1Q8TBY8 1022 aa22.58■■□□□ 1.21
SNAPC3-205ENST00000467062 RIMS2Q9UQ26 1411 aa22.58■■□□□ 1.2
SNAPC3-205ENST00000467062 METP08581 1390 aa22.57■■□□□ 1.2
SNAPC3-205ENST00000467062 COL3A1P02461 1466 aaPredicted RBP22.57■■□□□ 1.2
SNAPC3-205ENST00000467062 A2ML1A8K2U0 1454 aa22.56■■□□□ 1.2
SNAPC3-205ENST00000467062 ELL2O00472 640 aaPredicted RBP22.56■■□□□ 1.2
SNAPC3-205ENST00000467062 PLPPR3Q6T4P5 718 aa22.56■■□□□ 1.2
SNAPC3-205ENST00000467062 ESF1Q9H501 851 aaKnown RBP22.56■■□□□ 1.2
SNAPC3-205ENST00000467062 RRS1Q15050 365 aaKnown RBP22.56■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms