RNA–Protein interactions for RNA: ENST00000466892.5

HLA-C-205, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-205ENST00000466892 DDX17Q92841 729 aaKnown RBP22.49■■□□□ 1.19
HLA-C-205ENST00000466892 PANK3Q9H999 370 aa22.48■■□□□ 1.19
HLA-C-205ENST00000466892 PHLPP1O60346 1717 aa22.48■■□□□ 1.19
HLA-C-205ENST00000466892 MON2Q7Z3U7 1717 aa22.48■■□□□ 1.19
HLA-C-205ENST00000466892 HSPA1LP34931 641 aa22.47■■□□□ 1.19
HLA-C-205ENST00000466892 TTC21BQ7Z4L5 1316 aa22.47■■□□□ 1.19
HLA-C-205ENST00000466892 NRKQ7Z2Y5 1582 aa22.46■■□□□ 1.19
HLA-C-205ENST00000466892 TRPM3Q9HCF6 1732 aaPredicted RBP22.46■■□□□ 1.19
HLA-C-205ENST00000466892 XPCQ01831 940 aaPredicted RBP22.46■■□□□ 1.19
HLA-C-205ENST00000466892 JCADQ9P266 1359 aa22.45■■□□□ 1.18
HLA-C-205ENST00000466892 PAK3O75914 559 aaPredicted RBP22.44■■□□□ 1.18
HLA-C-205ENST00000466892 CGNL1Q0VF96 1302 aa22.44■■□□□ 1.18
HLA-C-205ENST00000466892 CARD14Q9BXL6 1004 aa22.44■■□□□ 1.18
HLA-C-205ENST00000466892 NSD3Q9BZ95 1437 aa22.44■■□□□ 1.18
HLA-C-205ENST00000466892 NSD2O96028 1365 aa22.42■■□□□ 1.18
HLA-C-205ENST00000466892 USP31Q70CQ4 1352 aa22.42■■□□□ 1.18
HLA-C-205ENST00000466892 KNSTRNQ9Y448 316 aa22.42■■□□□ 1.18
HLA-C-205ENST00000466892 PNPLA6Q8IY17 1366 aa22.41■■□□□ 1.18
HLA-C-205ENST00000466892 ABTB2Q8N961 1025 aa22.41■■□□□ 1.18
HLA-C-205ENST00000466892 ALS2Q96Q42 1657 aa22.41■■□□□ 1.18
HLA-C-205ENST00000466892 NPC1L1Q9UHC9 1359 aa22.4■■□□□ 1.18
HLA-C-205ENST00000466892 PER1O15534 1290 aaPredicted RBP22.4■■□□□ 1.18
HLA-C-205ENST00000466892 NLRP13Q86W25 1043 aa22.4■■□□□ 1.18
HLA-C-205ENST00000466892 MED1Q15648 1581 aaPredicted RBP22.4■■□□□ 1.18
HLA-C-205ENST00000466892 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.39■■□□□ 1.17
HLA-C-205ENST00000466892 COL22A1Q8NFW1 1626 aaPredicted RBP22.39■■□□□ 1.17
HLA-C-205ENST00000466892 SPATA31A6Q5VVP1 1343 aa22.38■■□□□ 1.17
HLA-C-205ENST00000466892 USP19O94966 1318 aa22.37■■□□□ 1.17
HLA-C-205ENST00000466892 SHPRHQ149N8 1683 aa22.37■■□□□ 1.17
HLA-C-205ENST00000466892 FYB1O15117 783 aa22.36■■□□□ 1.17
HLA-C-205ENST00000466892 LMOD2Q6P5Q4 547 aa22.36■■□□□ 1.17
HLA-C-205ENST00000466892 OVOS2A0A0J9YW53 1432 aa22.35■■□□□ 1.17
HLA-C-205ENST00000466892 OVOS2Q6IE36 1432 aa22.35■■□□□ 1.17
HLA-C-205ENST00000466892 NLRP6P59044 892 aa22.35■■□□□ 1.17
HLA-C-205ENST00000466892 NME9Q86XW9 330 aa22.35■■□□□ 1.17
HLA-C-205ENST00000466892 PIK3C2AO00443 1686 aa22.35■■□□□ 1.17
HLA-C-205ENST00000466892 USP54Q70EL1 1684 aa22.35■■□□□ 1.17
HLA-C-205ENST00000466892 DDX10Q13206 875 aaKnown RBP22.34■■□□□ 1.17
HLA-C-205ENST00000466892 AMER1Q5JTC6 1135 aaPredicted RBP22.34■■□□□ 1.17
HLA-C-205ENST00000466892 COG3Q96JB2 828 aa22.34■■□□□ 1.17
HLA-C-205ENST00000466892 KCNH5Q8NCM2 988 aa22.33■■□□□ 1.17
HLA-C-205ENST00000466892 SLIT3O75094 1523 aa22.31■■□□□ 1.16
HLA-C-205ENST00000466892 GGNBP2Q9H3C7 697 aa22.29■■□□□ 1.16
HLA-C-205ENST00000466892 ILDR1Q86SU0 546 aaPredicted RBP22.28■■□□□ 1.16
HLA-C-205ENST00000466892 GCP02774 474 aa22.27■■□□□ 1.16
HLA-C-205ENST00000466892 NUTM2GQ5VZR2 741 aa22.27■■□□□ 1.16
HLA-C-205ENST00000466892 CPDO75976 1380 aa22.26■■□□□ 1.15
HLA-C-205ENST00000466892 HAP1P54257 671 aaPredicted RBP22.26■■□□□ 1.15
HLA-C-205ENST00000466892 KIF20BQ96Q89 1820 aa22.26■■□□□ 1.15
HLA-C-205ENST00000466892 CRYBG1Q9Y4K1 1723 aa22.25■■□□□ 1.15
HLA-C-205ENST00000466892 AATKQ6ZMQ8 1374 aa22.25■■□□□ 1.15
HLA-C-205ENST00000466892 ZRANB1Q9UGI0 708 aa22.24■■□□□ 1.15
HLA-C-205ENST00000466892 MORC1Q86VD1 984 aa22.23■■□□□ 1.15
HLA-C-205ENST00000466892 PHRF1Q9P1Y6 1649 aaKnown RBP22.23■■□□□ 1.15
HLA-C-205ENST00000466892 NFAT5O94916 1531 aa22.22■■□□□ 1.15
HLA-C-205ENST00000466892 CABLES1Q8TDN4 633 aa22.22■■□□□ 1.15
HLA-C-205ENST00000466892 KIF24Q5T7B8 1368 aa22.22■■□□□ 1.15
HLA-C-205ENST00000466892 ABCA3Q99758 1704 aa22.21■■□□□ 1.15
HLA-C-205ENST00000466892 ANKRD26Q9UPS8 1709 aa22.21■■□□□ 1.15
HLA-C-205ENST00000466892 MARF1Q9Y4F3 1742 aaKnown RBP22.21■■□□□ 1.15
HLA-C-205ENST00000466892 ABCC6O95255 1503 aa22.21■■□□□ 1.15
HLA-C-205ENST00000466892 CC2D1BQ5T0F9 858 aaKnown RBP22.2■■□□□ 1.14
HLA-C-205ENST00000466892 ARHGEF25Q86VW2 580 aa22.19■■□□□ 1.14
HLA-C-205ENST00000466892 LRP6O75581 1613 aa22.18■■□□□ 1.14
HLA-C-205ENST00000466892 RTL1A6NKG5 1358 aa22.18■■□□□ 1.14
HLA-C-205ENST00000466892 PARD3Q8TEW0 1356 aa22.18■■□□□ 1.14
HLA-C-205ENST00000466892 NUTM2BA6NNL0 878 aaPredicted RBP22.18■■□□□ 1.14
HLA-C-205ENST00000466892 NUTM2EB1AL46 878 aaPredicted RBP22.18■■□□□ 1.14
HLA-C-205ENST00000466892 RALBP1Q15311 655 aa22.18■■□□□ 1.14
HLA-C-205ENST00000466892 NUTM2AQ8IVF1 878 aaPredicted RBP22.18■■□□□ 1.14
HLA-C-205ENST00000466892 KIAA0232Q92628 1395 aa22.17■■□□□ 1.14
HLA-C-205ENST00000466892 PRDM11Q9NQV5 511 aa22.17■■□□□ 1.14
HLA-C-205ENST00000466892 SMG6Q86US8 1419 aaKnown RBP22.14■■□□□ 1.14
HLA-C-205ENST00000466892 ZC3H6P61129 1189 aaKnown RBP22.14■■□□□ 1.13
HLA-C-205ENST00000466892 MAP3K19Q56UN5 1328 aa22.13■■□□□ 1.13
HLA-C-205ENST00000466892 PLEKHG5O94827 1062 aa22.13■■□□□ 1.13
HLA-C-205ENST00000466892 ADAMTS2O95450 1211 aa22.13■■□□□ 1.13
HLA-C-205ENST00000466892 MEX3CQ5U5Q3 659 aaKnown RBP22.13■■□□□ 1.13
HLA-C-205ENST00000466892 SOX12O15370 315 aa22.12■■□□□ 1.13
HLA-C-205ENST00000466892 BLMP54132 1417 aaPredicted RBP22.12■■□□□ 1.13
HLA-C-205ENST00000466892 FLT4P35916 1363 aa22.12■■□□□ 1.13
HLA-C-205ENST00000466892 FAM83GA6ND36 823 aa22.11■■□□□ 1.13
HLA-C-205ENST00000466892 FNBP4Q8N3X1 1017 aaPredicted RBP22.11■■□□□ 1.13
HLA-C-205ENST00000466892 POLKQ9UBT6 870 aa22.11■■□□□ 1.13
HLA-C-205ENST00000466892 COL14A1Q05707 1796 aaKnown RBP22.11■■□□□ 1.13
HLA-C-205ENST00000466892 IP6K1Q92551 441 aa22.1■■□□□ 1.13
HLA-C-205ENST00000466892 PRKRIP1Q9H875 184 aaPredicted RBP22.1■■□□□ 1.13
HLA-C-205ENST00000466892 SLIT2O94813 1529 aa22.1■■□□□ 1.13
HLA-C-205ENST00000466892 AMPHP49418 695 aa22.09■■□□□ 1.13
HLA-C-205ENST00000466892 ANP32CO43423 234 aa22.08■■□□□ 1.13
HLA-C-205ENST00000466892 TNNT2P45379 298 aaPredicted RBP22.08■■□□□ 1.13
HLA-C-205ENST00000466892 RRS1Q15050 365 aaKnown RBP22.08■■□□□ 1.13
HLA-C-205ENST00000466892 NGLY1Q96IV0 654 aa22.08■■□□□ 1.13
HLA-C-205ENST00000466892 C8orf37Q96NL8 207 aa22.08■■□□□ 1.13
HLA-C-205ENST00000466892 CDK12Q9NYV4 1490 aaPredicted RBP22.08■■□□□ 1.12
HLA-C-205ENST00000466892 HOXC9P31274 260 aa22.07■■□□□ 1.12
HLA-C-205ENST00000466892 INSRP06213 1382 aa22.07■■□□□ 1.12
HLA-C-205ENST00000466892 LMO7Q8WWI1 1683 aa22.07■■□□□ 1.12
HLA-C-205ENST00000466892 MYBBP1AQ9BQG0 1328 aaKnown RBP22.06■■□□□ 1.12
HLA-C-205ENST00000466892 PPP2R1AP30153 589 aa22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms