RNA–Protein interactions for RNA: ENST00000466707.1

ABCA2-213, Transcript of ATP binding cassette subfamily A member 2, humanhuman

TSL 2

Gene ABCA2, Length 555 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA2-213ENST00000466707 CCDC125Q86Z20 511 aa36.98■■■■□ 3.51
ABCA2-213ENST00000466707 PHRF1Q9P1Y6 1649 aaKnown RBP36.96■■■■□ 3.51
ABCA2-213ENST00000466707 BLMP54132 1417 aaPredicted RBP36.95■■■■□ 3.51
ABCA2-213ENST00000466707 ONECUT3O60422 494 aaPredicted RBP36.95■■■■□ 3.51
ABCA2-213ENST00000466707 PAK3O75914 559 aaPredicted RBP36.95■■■■□ 3.51
ABCA2-213ENST00000466707 NBPF1Q3BBV0 1214 aa36.95■■■■□ 3.51
ABCA2-213ENST00000466707 BTG4Q9NY30 223 aa36.95■■■■□ 3.51
ABCA2-213ENST00000466707 CDK19Q9BWU1 502 aa36.94■■■■□ 3.5
ABCA2-213ENST00000466707 POLR3AO14802 1390 aaPredicted RBP36.89■■■■□ 3.5
ABCA2-213ENST00000466707 SRCAPQ6ZRS2 3230 aa36.88■■■■□ 3.49
ABCA2-213ENST00000466707 KRT27Q7Z3Y8 459 aa36.87■■■■□ 3.49
ABCA2-213ENST00000466707 FAM98CQ17RN3 349 aaKnown RBP36.86■■■■□ 3.49
ABCA2-213ENST00000466707 ZRANB1Q9UGI0 708 aa36.86■■■■□ 3.49
ABCA2-213ENST00000466707 ACEP12821 1306 aa36.85■■■■□ 3.49
ABCA2-213ENST00000466707 QRICH2Q9H0J4 1663 aa36.84■■■■□ 3.49
ABCA2-213ENST00000466707 DEFB132Q7Z7B7 95 aa36.84■■■■□ 3.49
ABCA2-213ENST00000466707 PRDM11Q9NQV5 511 aa36.84■■■■□ 3.49
ABCA2-213ENST00000466707 A0A0G2JS52 829 aa36.83■■■■□ 3.49
ABCA2-213ENST00000466707 MYT1Q01538 1121 aa36.83■■■■□ 3.49
ABCA2-213ENST00000466707 THSD7AQ9UPZ6 1657 aa36.83■■■■□ 3.49
ABCA2-213ENST00000466707 KIAA0232Q92628 1395 aa36.82■■■■□ 3.49
ABCA2-213ENST00000466707 NUTM2GQ5VZR2 741 aa36.81■■■■□ 3.48
ABCA2-213ENST00000466707 CCDC61Q9Y6R9 512 aa36.81■■■■□ 3.48
ABCA2-213ENST00000466707 SPATA31A5Q5VU36 1347 aa36.81■■■■□ 3.48
ABCA2-213ENST00000466707 SPATA31A7Q8IWB4 1347 aa36.81■■■■□ 3.48
ABCA2-213ENST00000466707 NRKQ7Z2Y5 1582 aa36.79■■■■□ 3.48
ABCA2-213ENST00000466707 PLEKHG3A1L390 1219 aa36.79■■■■□ 3.48
ABCA2-213ENST00000466707 NBPF8Q3BBV2 869 aa36.79■■■■□ 3.48
ABCA2-213ENST00000466707 CHRNA2Q15822 529 aa36.77■■■■□ 3.48
ABCA2-213ENST00000466707 CENPJQ9HC77 1338 aaPredicted RBP36.77■■■■□ 3.48
ABCA2-213ENST00000466707 TRPM1Q7Z4N2 1603 aa36.74■■■■□ 3.47
ABCA2-213ENST00000466707 PPIP5K1Q6PFW1 1433 aa36.74■■■■□ 3.47
ABCA2-213ENST00000466707 ZC3H6P61129 1189 aaKnown RBP36.73■■■■□ 3.47
ABCA2-213ENST00000466707 SF3B2Q13435 895 aaKnown RBP36.73■■■■□ 3.47
ABCA2-213ENST00000466707 L3MBTL2Q969R5 705 aa36.73■■■■□ 3.47
ABCA2-213ENST00000466707 SRPK2P78362 688 aaKnown RBP36.71■■■■□ 3.47
ABCA2-213ENST00000466707 CABP2Q9NPB3 220 aa36.7■■■■□ 3.47
ABCA2-213ENST00000466707 RGPD1P0DJD0 1748 aa36.69■■■■□ 3.46
ABCA2-213ENST00000466707 FAM182BQ5T319 152 aa36.69■■■■□ 3.46
ABCA2-213ENST00000466707 LMO7Q8WWI1 1683 aa36.69■■■■□ 3.46
ABCA2-213ENST00000466707 SPATA31A1Q5TZJ5 1347 aa36.68■■■■□ 3.46
ABCA2-213ENST00000466707 SIN3AQ96ST3 1273 aa36.68■■■■□ 3.46
ABCA2-213ENST00000466707 USP19O94966 1318 aa36.67■■■■□ 3.46
ABCA2-213ENST00000466707 STRN4Q9NRL3 753 aa36.67■■■■□ 3.46
ABCA2-213ENST00000466707 ABTB2Q8N961 1025 aa36.66■■■■□ 3.46
ABCA2-213ENST00000466707 TNS1Q9HBL0 1735 aaKnown RBP36.65■■■■□ 3.46
ABCA2-213ENST00000466707 CAMTA1Q9Y6Y1 1673 aa36.65■■■■□ 3.46
ABCA2-213ENST00000466707 SSH2Q76I76 1423 aa36.63■■■■□ 3.45
ABCA2-213ENST00000466707 CPDO75976 1380 aa36.61■■■■□ 3.45
ABCA2-213ENST00000466707 BAG6P46379 1132 aa36.59■■■■□ 3.45
ABCA2-213ENST00000466707 USP6P35125 1406 aa36.59■■■■□ 3.45
ABCA2-213ENST00000466707 PIK3C2AO00443 1686 aa36.56■■■■□ 3.44
ABCA2-213ENST00000466707 CABP1Q9NZU7 370 aa36.56■■■■□ 3.44
ABCA2-213ENST00000466707 NEUROD1Q13562 356 aa36.55■■■■□ 3.44
ABCA2-213ENST00000466707 USP35Q9P2H5 1018 aa36.55■■■■□ 3.44
ABCA2-213ENST00000466707 BRD4O60885 1362 aaPredicted RBP36.54■■■■□ 3.44
ABCA2-213ENST00000466707 NLRP13Q86W25 1043 aa36.54■■■■□ 3.44
ABCA2-213ENST00000466707 GCP02774 474 aa36.53■■■■□ 3.44
ABCA2-213ENST00000466707 LARP1Q6PKG0 1096 aaKnown RBP36.53■■■■□ 3.44
ABCA2-213ENST00000466707 SLIT3O75094 1523 aa36.53■■■■□ 3.44
ABCA2-213ENST00000466707 ROCK2O75116 1388 aaKnown RBP36.53■■■■□ 3.44
ABCA2-213ENST00000466707 EVA1CP58658 441 aa36.52■■■■□ 3.44
ABCA2-213ENST00000466707 EN1Q05925 392 aaPredicted RBP36.51■■■■□ 3.44
ABCA2-213ENST00000466707 DISP2A7MBM2 1401 aa36.51■■■■□ 3.43
ABCA2-213ENST00000466707 COL5A2P05997 1499 aaPredicted RBP36.5■■■■□ 3.43
ABCA2-213ENST00000466707 AKAP12Q02952 1782 aa36.5■■■■□ 3.43
ABCA2-213ENST00000466707 EVC2Q86UK5 1308 aa36.49■■■■□ 3.43
ABCA2-213ENST00000466707 LRP5O75197 1615 aa36.48■■■■□ 3.43
ABCA2-213ENST00000466707 BARGINQ6ZT62 677 aa36.48■■■■□ 3.43
ABCA2-213ENST00000466707 PSDA5PKW4 1024 aaPredicted RBP36.46■■■■□ 3.43
ABCA2-213ENST00000466707 PARP4Q9UKK3 1724 aaKnown RBP36.45■■■■□ 3.43
ABCA2-213ENST00000466707 NLRP6P59044 892 aa36.44■■■■□ 3.42
ABCA2-213ENST00000466707 COL18A1P39060 1754 aa36.44■■■■□ 3.42
ABCA2-213ENST00000466707 TCP11L2Q8N4U5 519 aa36.43■■■■□ 3.42
ABCA2-213ENST00000466707 TRIM37O94972 964 aa36.42■■■■□ 3.42
ABCA2-213ENST00000466707 FAM196AQ6ZSG2 479 aa36.42■■■■□ 3.42
ABCA2-213ENST00000466707 ZBTB7CA1YPR0 619 aa36.41■■■■□ 3.42
ABCA2-213ENST00000466707 CRB1P82279 1406 aa36.38■■■■□ 3.41
ABCA2-213ENST00000466707 EZH2Q15910 746 aaKnown RBP36.38■■■■□ 3.41
ABCA2-213ENST00000466707 AATKQ6ZMQ8 1374 aa36.38■■■■□ 3.41
ABCA2-213ENST00000466707 PDE3BQ13370 1112 aa36.36■■■■□ 3.41
ABCA2-213ENST00000466707 RREB1Q92766 1687 aa36.35■■■■□ 3.41
ABCA2-213ENST00000466707 TTC21BQ7Z4L5 1316 aa36.35■■■■□ 3.41
ABCA2-213ENST00000466707 THRAP3Q9Y2W1 955 aaKnown RBP36.35■■■■□ 3.41
ABCA2-213ENST00000466707 WNK3Q9BYP7 1800 aa36.35■■■■□ 3.41
ABCA2-213ENST00000466707 RGPD5Q99666 1765 aa36.35■■■■□ 3.41
ABCA2-213ENST00000466707 LRRC37A3O60309 1634 aa36.34■■■■□ 3.41
ABCA2-213ENST00000466707 MON2Q7Z3U7 1717 aa36.34■■■■□ 3.41
ABCA2-213ENST00000466707 CAMKK2Q96RR4 588 aa36.34■■■■□ 3.41
ABCA2-213ENST00000466707 CPSF1Q10570 1443 aaKnown RBP36.34■■■■□ 3.41
ABCA2-213ENST00000466707 PEAK1Q9H792 1746 aa36.31■■■■□ 3.4
ABCA2-213ENST00000466707 NUP188Q5SRE5 1749 aa36.31■■■■□ 3.4
ABCA2-213ENST00000466707 APBA3O96018 575 aa36.3■■■■□ 3.4
ABCA2-213ENST00000466707 R3HDM1Q15032 1099 aaKnown RBP36.3■■■■□ 3.4
ABCA2-213ENST00000466707 SBNO2Q9Y2G9 1366 aa36.29■■■■□ 3.4
ABCA2-213ENST00000466707 ZNF692Q9BU19 519 aaPredicted RBP36.29■■■■□ 3.4
ABCA2-213ENST00000466707 NFAT5O94916 1531 aa36.29■■■■□ 3.4
ABCA2-213ENST00000466707 AXIN2Q9Y2T1 843 aa36.28■■■■□ 3.4
ABCA2-213ENST00000466707 TTC21AQ8NDW8 1320 aa36.26■■■■□ 3.39
ABCA2-213ENST00000466707 KTN1Q86UP2 1357 aaKnown RBP36.26■■■■□ 3.39
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms