RNA–Protein interactions for RNA: ENST00000466539.1

PSME4-204, Transcript of proteasome activator subunit 4, humanhuman

TSL 4

Gene PSME4, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME4-204ENST00000466539 KMT5BQ4FZB7 885 aa9.58□□□□□ -0.88
PSME4-204ENST00000466539 MYSM1Q5VVJ2 828 aa9.58□□□□□ -0.88
PSME4-204ENST00000466539 ZCCHC11Q5TAX3 1644 aaKnown RBP9.57□□□□□ -0.88
PSME4-204ENST00000466539 SUPT6HQ7KZ85 1726 aaKnown RBP9.57□□□□□ -0.88
PSME4-204ENST00000466539 HOXA2O43364 376 aa9.57□□□□□ -0.88
PSME4-204ENST00000466539 NUTM1Q86Y26 1132 aa9.57□□□□□ -0.88
PSME4-204ENST00000466539 HCSTQ9UBK5 93 aa9.57□□□□□ -0.88
PSME4-204ENST00000466539 NECTIN2Q92692 538 aa9.56□□□□□ -0.88
PSME4-204ENST00000466539 TROQ12816 1431 aaPredicted RBP9.56□□□□□ -0.88
PSME4-204ENST00000466539 ABCC10Q5T3U5 1492 aa9.55□□□□□ -0.88
PSME4-204ENST00000466539 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.55□□□□□ -0.88
PSME4-204ENST00000466539 ATP6V1AP38606 617 aa9.55□□□□□ -0.88
PSME4-204ENST00000466539 MORN1Q5T089 497 aa9.55□□□□□ -0.88
PSME4-204ENST00000466539 BLOC1S3Q6QNY0 202 aa9.55□□□□□ -0.88
PSME4-204ENST00000466539 POLR3EQ9NVU0 708 aa9.55□□□□□ -0.88
PSME4-204ENST00000466539 LIMD1Q9UGP4 676 aa9.55□□□□□ -0.88
PSME4-204ENST00000466539 PCDHGC3Q9UN70 934 aa9.55□□□□□ -0.88
PSME4-204ENST00000466539 NYAP1Q6ZVC0 841 aa9.54□□□□□ -0.88
PSME4-204ENST00000466539 PCDHB3Q9Y5E6 796 aa9.54□□□□□ -0.88
PSME4-204ENST00000466539 NCOA2Q15596 1464 aa9.53□□□□□ -0.88
PSME4-204ENST00000466539 PHLDB1Q86UU1 1377 aa9.53□□□□□ -0.88
PSME4-204ENST00000466539 COPS2P61201 443 aa9.53□□□□□ -0.88
PSME4-204ENST00000466539 TJAP1Q5JTD0 557 aa9.53□□□□□ -0.88
PSME4-204ENST00000466539 FBXO31Q5XUX0 539 aaPredicted RBP9.53□□□□□ -0.88
PSME4-204ENST00000466539 RIC3Q7Z5B4 369 aa9.53□□□□□ -0.88
PSME4-204ENST00000466539 PROCA1Q8NCQ7 364 aaPredicted RBP9.53□□□□□ -0.88
PSME4-204ENST00000466539 PRR14Q9BWN1 585 aa9.53□□□□□ -0.88
PSME4-204ENST00000466539 SLC27A5Q9Y2P5 690 aa9.53□□□□□ -0.88
PSME4-204ENST00000466539 PCDHB15Q9Y5E8 787 aa9.53□□□□□ -0.88
PSME4-204ENST00000466539 KIF14Q15058 1648 aa9.53□□□□□ -0.88
PSME4-204ENST00000466539 USP46P62068 366 aa9.52□□□□□ -0.89
PSME4-204ENST00000466539 SH3D19Q5HYK7 790 aa9.52□□□□□ -0.89
PSME4-204ENST00000466539 CDC42BPAQ5VT25 1732 aa9.52□□□□□ -0.89
PSME4-204ENST00000466539 RSBN1LQ6PCB5 846 aaPredicted RBP9.52□□□□□ -0.89
PSME4-204ENST00000466539 ZNF516Q92618 1163 aa9.52□□□□□ -0.89
PSME4-204ENST00000466539 MTRQ99707 1265 aa9.52□□□□□ -0.89
PSME4-204ENST00000466539 TCOF1Q13428 1488 aaKnown RBP9.52□□□□□ -0.89
PSME4-204ENST00000466539 MAPKBP1O60336 1514 aa9.51□□□□□ -0.89
PSME4-204ENST00000466539 SPTLC1O15269 473 aa9.51□□□□□ -0.89
PSME4-204ENST00000466539 TRIM26Q12899 539 aaPredicted RBP9.51□□□□□ -0.89
PSME4-204ENST00000466539 SKIV2LQ15477 1246 aaKnown RBP9.51□□□□□ -0.89
PSME4-204ENST00000466539 SCUBE3Q8IX30 993 aa9.51□□□□□ -0.89
PSME4-204ENST00000466539 RSPH6AQ9H0K4 717 aa9.51□□□□□ -0.89
PSME4-204ENST00000466539 ARAP3Q8WWN8 1544 aa9.51□□□□□ -0.89
PSME4-204ENST00000466539 MYOM3Q5VTT5 1437 aa9.5□□□□□ -0.89
PSME4-204ENST00000466539 MIA2Q96PC5 1412 aa9.5□□□□□ -0.89
PSME4-204ENST00000466539 FDX1P10109 184 aa9.5□□□□□ -0.89
PSME4-204ENST00000466539 DIXDC1Q155Q3 683 aa9.5□□□□□ -0.89
PSME4-204ENST00000466539 TMEM132AQ24JP5 1023 aa9.5□□□□□ -0.89
PSME4-204ENST00000466539 SYMPKQ92797 1274 aaKnown RBP9.5□□□□□ -0.89
PSME4-204ENST00000466539 ITSN2Q9NZM3 1697 aa9.49□□□□□ -0.89
PSME4-204ENST00000466539 MTUS2Q5JR59 1369 aa9.49□□□□□ -0.89
PSME4-204ENST00000466539 PREX2Q70Z35 1606 aa9.49□□□□□ -0.89
PSME4-204ENST00000466539 ABCA9Q8IUA7 1624 aa9.49□□□□□ -0.89
PSME4-204ENST00000466539 FGD6Q6ZV73 1430 aa9.48□□□□□ -0.89
PSME4-204ENST00000466539 CDC42BPBQ9Y5S2 1711 aa9.48□□□□□ -0.89
PSME4-204ENST00000466539 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.48□□□□□ -0.89
PSME4-204ENST00000466539 GPATCH8Q9UKJ3 1502 aaKnown RBP9.48□□□□□ -0.89
PSME4-204ENST00000466539 CLK2P49760 499 aaKnown RBP9.48□□□□□ -0.89
PSME4-204ENST00000466539 CSPP1Q1MSJ5 1256 aa9.48□□□□□ -0.89
PSME4-204ENST00000466539 RNF19BQ6ZMZ0 732 aa9.48□□□□□ -0.89
PSME4-204ENST00000466539 THAP11Q96EK4 314 aa9.48□□□□□ -0.89
PSME4-204ENST00000466539 GOPCQ9HD26 462 aa9.48□□□□□ -0.89
PSME4-204ENST00000466539 WDR7Q9Y4E6 1490 aa9.47□□□□□ -0.89
PSME4-204ENST00000466539 TTC37Q6PGP7 1564 aa9.47□□□□□ -0.89
PSME4-204ENST00000466539 QPCTQ16769 361 aa9.47□□□□□ -0.89
PSME4-204ENST00000466539 GRIPAP1Q4V328 841 aa9.47□□□□□ -0.89
PSME4-204ENST00000466539 NKX2-3Q8TAU0 364 aa9.47□□□□□ -0.89
PSME4-204ENST00000466539 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.47□□□□□ -0.89
PSME4-204ENST00000466539 TLL1O43897 1013 aa9.46□□□□□ -0.9
PSME4-204ENST00000466539 ZPR1O75312 459 aa9.46□□□□□ -0.9
PSME4-204ENST00000466539 GJA5P36382 358 aa9.46□□□□□ -0.9
PSME4-204ENST00000466539 CABLES1Q8TDN4 633 aa9.46□□□□□ -0.9
PSME4-204ENST00000466539 CDK11AQ9UQ88 783 aaPredicted RBP9.46□□□□□ -0.9
PSME4-204ENST00000466539 CCNB3Q8WWL7 1395 aa9.46□□□□□ -0.9
PSME4-204ENST00000466539 PTPN23Q9H3S7 1636 aa9.45□□□□□ -0.9
PSME4-204ENST00000466539 NR1I2O75469 434 aa9.45□□□□□ -0.9
PSME4-204ENST00000466539 BRICD5Q6PL45 260 aa9.45□□□□□ -0.9
PSME4-204ENST00000466539 IL21Q9HBE4 155 aa9.45□□□□□ -0.9
PSME4-204ENST00000466539 GLI2P10070 1586 aa9.45□□□□□ -0.9
PSME4-204ENST00000466539 MYO5CQ9NQX4 1742 aa9.45□□□□□ -0.9
PSME4-204ENST00000466539 LILRB3O75022 631 aa9.44□□□□□ -0.9
PSME4-204ENST00000466539 ITGBL1O95965 494 aaPredicted RBP9.44□□□□□ -0.9
PSME4-204ENST00000466539 HRCP23327 699 aa9.44□□□□□ -0.9
PSME4-204ENST00000466539 TUSC1Q2TAM9 212 aa9.44□□□□□ -0.9
PSME4-204ENST00000466539 PLA2G2EQ9NZK7 142 aa9.44□□□□□ -0.9
PSME4-204ENST00000466539 ASXL2Q76L83 1435 aa9.44□□□□□ -0.9
PSME4-204ENST00000466539 RTL5Q5HYW3 569 aaPredicted RBP9.43□□□□□ -0.9
PSME4-204ENST00000466539 DNMT1P26358 1616 aaKnown RBP9.42□□□□□ -0.9
PSME4-204ENST00000466539 PLEKHD1A6NEE1 506 aa9.42□□□□□ -0.9
PSME4-204ENST00000466539 PPARGC1BQ86YN6 1023 aaKnown RBP9.42□□□□□ -0.9
PSME4-204ENST00000466539 FAM160A2Q8N612 972 aaPredicted RBP9.42□□□□□ -0.9
PSME4-204ENST00000466539 PCMTD1Q96MG8 357 aaPredicted RBP9.42□□□□□ -0.9
PSME4-204ENST00000466539 CROCC2H7BZ55 1655 aa9.42□□□□□ -0.9
PSME4-204ENST00000466539 MAP3K4Q9Y6R4 1608 aa9.42□□□□□ -0.9
PSME4-204ENST00000466539 ARHGEF5Q12774 1597 aa9.41□□□□□ -0.9
PSME4-204ENST00000466539 PLCH2O75038 1416 aa9.41□□□□□ -0.9
PSME4-204ENST00000466539 C6orf229H3BNL8 230 aa9.41□□□□□ -0.9
PSME4-204ENST00000466539 SPSB2Q99619 263 aa9.41□□□□□ -0.9
PSME4-204ENST00000466539 SALL2Q9Y467 1007 aaPredicted RBP9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms