RNA–Protein interactions for RNA: ENST00000465903.5

SMC4-206, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 849 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-206ENST00000465903 CRYBG1Q9Y4K1 1723 aa36.49■■■■□ 3.43
SMC4-206ENST00000465903 PLEKHG5O94827 1062 aa36.48■■■■□ 3.43
SMC4-206ENST00000465903 ZNF772Q68DY9 489 aaPredicted RBP36.48■■■■□ 3.43
SMC4-206ENST00000465903 NGLY1Q96IV0 654 aa36.48■■■■□ 3.43
SMC4-206ENST00000465903 PUS7Q96PZ0 661 aaKnown RBP36.48■■■■□ 3.43
SMC4-206ENST00000465903 USP6P35125 1406 aa36.46■■■■□ 3.43
SMC4-206ENST00000465903 SLC24A1O60721 1099 aa36.44■■■■□ 3.42
SMC4-206ENST00000465903 SSH2Q76I76 1423 aa36.43■■■■□ 3.42
SMC4-206ENST00000465903 BRD4O60885 1362 aaPredicted RBP36.43■■■■□ 3.42
SMC4-206ENST00000465903 FNBP4Q8N3X1 1017 aaPredicted RBP36.43■■■■□ 3.42
SMC4-206ENST00000465903 CPSF1Q10570 1443 aaKnown RBP36.42■■■■□ 3.42
SMC4-206ENST00000465903 ZNF692Q9BU19 519 aaPredicted RBP36.41■■■■□ 3.42
SMC4-206ENST00000465903 HAP1P54257 671 aaPredicted RBP36.4■■■■□ 3.42
SMC4-206ENST00000465903 CD163L1Q9NR16 1453 aa36.39■■■■□ 3.42
SMC4-206ENST00000465903 NUTM2GQ5VZR2 741 aa36.39■■■■□ 3.42
SMC4-206ENST00000465903 SLC12A5Q9H2X9 1139 aa36.39■■■■□ 3.42
SMC4-206ENST00000465903 TMF1P82094 1093 aa36.38■■■■□ 3.41
SMC4-206ENST00000465903 MON2Q7Z3U7 1717 aa36.38■■■■□ 3.41
SMC4-206ENST00000465903 ABTB2Q8N961 1025 aa36.38■■■■□ 3.41
SMC4-206ENST00000465903 PHRF1Q9P1Y6 1649 aaKnown RBP36.37■■■■□ 3.41
SMC4-206ENST00000465903 TMC1Q8TDI8 760 aa36.36■■■■□ 3.41
SMC4-206ENST00000465903 USP21Q9UK80 565 aa36.36■■■■□ 3.41
SMC4-206ENST00000465903 NRKQ7Z2Y5 1582 aa36.35■■■■□ 3.41
SMC4-206ENST00000465903 BCL9LQ86UU0 1499 aa36.34■■■■□ 3.41
SMC4-206ENST00000465903 SLIT2O94813 1529 aa36.34■■■■□ 3.41
SMC4-206ENST00000465903 QTRT2Q9H974 415 aaKnown RBP36.33■■■■□ 3.41
SMC4-206ENST00000465903 KTN1Q86UP2 1357 aaKnown RBP36.32■■■■□ 3.4
SMC4-206ENST00000465903 PIK3C2AO00443 1686 aa36.32■■■■□ 3.4
SMC4-206ENST00000465903 TTC21BQ7Z4L5 1316 aa36.32■■■■□ 3.4
SMC4-206ENST00000465903 FAM83GA6ND36 823 aa36.31■■■■□ 3.4
SMC4-206ENST00000465903 PLCH1Q4KWH8 1693 aa36.3■■■■□ 3.4
SMC4-206ENST00000465903 USP19O94966 1318 aa36.3■■■■□ 3.4
SMC4-206ENST00000465903 TNKS1BP1Q9C0C2 1729 aaKnown RBP36.29■■■■□ 3.4
SMC4-206ENST00000465903 HSPA5P11021 654 aaKnown RBP36.29■■■■□ 3.4
SMC4-206ENST00000465903 EIF4G2P78344 907 aaKnown RBP eCLIP36.29■■■■□ 3.4
SMC4-206ENST00000465903 NLRP13Q86W25 1043 aa36.29■■■■□ 3.4
SMC4-206ENST00000465903 NWD2Q9ULI1 1742 aa36.27■■■■□ 3.4
SMC4-206ENST00000465903 RXRBP28702 533 aa36.26■■■■□ 3.4
SMC4-206ENST00000465903 ATRNO75882 1429 aa36.25■■■■□ 3.39
SMC4-206ENST00000465903 NLRP6P59044 892 aa36.25■■■■□ 3.39
SMC4-206ENST00000465903 HDGFL2Q7Z4V5 671 aaPredicted RBP36.25■■■■□ 3.39
SMC4-206ENST00000465903 A0A1W2PP64 1363 aa36.25■■■■□ 3.39
SMC4-206ENST00000465903 NINLQ9Y2I6 1382 aa36.25■■■■□ 3.39
SMC4-206ENST00000465903 COL14A1Q05707 1796 aaKnown RBP36.25■■■■□ 3.39
SMC4-206ENST00000465903 TRPC5Q9UL62 973 aaPredicted RBP36.24■■■■□ 3.39
SMC4-206ENST00000465903 TTC21AQ8NDW8 1320 aa36.24■■■■□ 3.39
SMC4-206ENST00000465903 UNC5CLQ8IV45 518 aa36.23■■■■□ 3.39
SMC4-206ENST00000465903 TERF2IPQ9NYB0 399 aa36.23■■■■□ 3.39
SMC4-206ENST00000465903 RBM6P78332 1123 aaKnown RBP36.22■■■■□ 3.39
SMC4-206ENST00000465903 CDCA8Q53HL2 280 aa36.22■■■■□ 3.39
SMC4-206ENST00000465903 SOCS7O14512 581 aa36.21■■■■□ 3.39
SMC4-206ENST00000465903 KIAA0232Q92628 1395 aa36.2■■■■□ 3.39
SMC4-206ENST00000465903 ZC3H6P61129 1189 aaKnown RBP36.2■■■■□ 3.39
SMC4-206ENST00000465903 NRAPQ86VF7 1730 aa36.2■■■■□ 3.38
SMC4-206ENST00000465903 SLIT3O75094 1523 aa36.19■■■■□ 3.38
SMC4-206ENST00000465903 GCP02774 474 aa36.19■■■■□ 3.38
SMC4-206ENST00000465903 EDC4Q6P2E9 1401 aaKnown RBP36.17■■■■□ 3.38
SMC4-206ENST00000465903 MYOM1P52179 1685 aa36.17■■■■□ 3.38
SMC4-206ENST00000465903 SUGP2Q8IX01 1082 aaKnown RBP eCLIP36.17■■■■□ 3.38
SMC4-206ENST00000465903 PRDM11Q9NQV5 511 aa36.17■■■■□ 3.38
SMC4-206ENST00000465903 BTG4Q9NY30 223 aa36.15■■■■□ 3.38
SMC4-206ENST00000465903 ZRANB1Q9UGI0 708 aa36.15■■■■□ 3.38
SMC4-206ENST00000465903 CDK12Q9NYV4 1490 aaPredicted RBP36.15■■■■□ 3.38
SMC4-206ENST00000465903 ANKRD36BQ8N2N9 1353 aa36.15■■■■□ 3.38
SMC4-206ENST00000465903 USP54Q70EL1 1684 aa36.14■■■■□ 3.38
SMC4-206ENST00000465903 CHRNA2Q15822 529 aa36.14■■■■□ 3.38
SMC4-206ENST00000465903 NME9Q86XW9 330 aa36.13■■■■□ 3.37
SMC4-206ENST00000465903 GJD4Q96KN9 370 aaPredicted RBP36.13■■■■□ 3.37
SMC4-206ENST00000465903 CPDO75976 1380 aa36.13■■■■□ 3.37
SMC4-206ENST00000465903 USP31Q70CQ4 1352 aa36.13■■■■□ 3.37
SMC4-206ENST00000465903 GLI3P10071 1580 aa36.1■■■■□ 3.37
SMC4-206ENST00000465903 VPS72Q15906 364 aa36.09■■■■□ 3.37
SMC4-206ENST00000465903 RGS12O14924 1447 aa36.08■■■■□ 3.37
SMC4-206ENST00000465903 LMO7Q8WWI1 1683 aa36.08■■■■□ 3.37
SMC4-206ENST00000465903 CAMTA1Q9Y6Y1 1673 aa36.05■■■■□ 3.36
SMC4-206ENST00000465903 C11orf95C9JLR9 678 aaPredicted RBP36.05■■■■□ 3.36
SMC4-206ENST00000465903 COL18A1P39060 1754 aa36.04■■■■□ 3.36
SMC4-206ENST00000465903 KCNH5Q8NCM2 988 aa36.03■■■■□ 3.36
SMC4-206ENST00000465903 NFAT5O94916 1531 aa36.03■■■■□ 3.36
SMC4-206ENST00000465903 POLR3GLQ9BT43 218 aa36.01■■■■□ 3.36
SMC4-206ENST00000465903 ARHGEF25Q86VW2 580 aa36■■■■□ 3.35
SMC4-206ENST00000465903 OVOS2A0A0J9YW53 1432 aa36■■■■□ 3.35
SMC4-206ENST00000465903 OVOS2Q6IE36 1432 aa36■■■■□ 3.35
SMC4-206ENST00000465903 SOX12O15370 315 aa35.99■■■■□ 3.35
SMC4-206ENST00000465903 CARD14Q9BXL6 1004 aa35.99■■■■□ 3.35
SMC4-206ENST00000465903 CCDC9Q9Y3X0 531 aaKnown RBP35.99■■■■□ 3.35
SMC4-206ENST00000465903 RGPD5Q99666 1765 aa35.98■■■■□ 3.35
SMC4-206ENST00000465903 ZBTB7CA1YPR0 619 aa35.97■■■■□ 3.35
SMC4-206ENST00000465903 AATKQ6ZMQ8 1374 aa35.97■■■■□ 3.35
SMC4-206ENST00000465903 SPATA31A5Q5VU36 1347 aa35.95■■■■□ 3.35
SMC4-206ENST00000465903 SPATA31A7Q8IWB4 1347 aa35.95■■■■□ 3.35
SMC4-206ENST00000465903 STRN4Q9NRL3 753 aa35.95■■■■□ 3.35
SMC4-206ENST00000465903 FYB1O15117 783 aa35.94■■■■□ 3.34
SMC4-206ENST00000465903 ONECUT3O60422 494 aaPredicted RBP35.94■■■■□ 3.34
SMC4-206ENST00000465903 KIF20BQ96Q89 1820 aa35.94■■■■□ 3.34
SMC4-206ENST00000465903 LTN1O94822 1766 aa35.93■■■■□ 3.34
SMC4-206ENST00000465903 BRWD3Q6RI45 1802 aa35.92■■■■□ 3.34
SMC4-206ENST00000465903 AXIN2Q9Y2T1 843 aa35.92■■■■□ 3.34
SMC4-206ENST00000465903 EVA1CP58658 441 aa35.91■■■■□ 3.34
SMC4-206ENST00000465903 COL5A2P05997 1499 aaPredicted RBP35.91■■■■□ 3.34
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms