RNA–Protein interactions for RNA: ENST00000465405.1

GABRE-205, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

TSL 1 (best)

Gene GABRE, Length 706 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-205ENST00000465405 TRPC5Q9UL62 973 aaPredicted RBP12.65□□□□□ -0.38
GABRE-205ENST00000465405 ARHGEF10O15013 1369 aa12.65□□□□□ -0.38
GABRE-205ENST00000465405 GPRASP1Q5JY77 1395 aa12.65□□□□□ -0.38
GABRE-205ENST00000465405 HAP1P54257 671 aaPredicted RBP12.64□□□□□ -0.39
GABRE-205ENST00000465405 NBPF8Q3BBV2 869 aa12.64□□□□□ -0.39
GABRE-205ENST00000465405 SLIT2O94813 1529 aa12.63□□□□□ -0.39
GABRE-205ENST00000465405 PAK3O75914 559 aaPredicted RBP12.63□□□□□ -0.39
GABRE-205ENST00000465405 UPF1Q92900 1129 aaKnown RBP eCLIP12.63□□□□□ -0.39
GABRE-205ENST00000465405 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.62□□□□□ -0.39
GABRE-205ENST00000465405 PLCH1Q4KWH8 1693 aa12.62□□□□□ -0.39
GABRE-205ENST00000465405 CABP2Q9NPB3 220 aa12.62□□□□□ -0.39
GABRE-205ENST00000465405 CCDC61Q9Y6R9 512 aa12.62□□□□□ -0.39
GABRE-205ENST00000465405 CRYBG1Q9Y4K1 1723 aa12.62□□□□□ -0.39
GABRE-205ENST00000465405 ACEP12821 1306 aa12.62□□□□□ -0.39
GABRE-205ENST00000465405 POLR3AO14802 1390 aaPredicted RBP12.61□□□□□ -0.39
GABRE-205ENST00000465405 ROCK2O75116 1388 aaKnown RBP12.61□□□□□ -0.39
GABRE-205ENST00000465405 SRPK2P78362 688 aaKnown RBP12.61□□□□□ -0.39
GABRE-205ENST00000465405 UNC5CLQ8IV45 518 aa12.61□□□□□ -0.39
GABRE-205ENST00000465405 PLEKHG3A1L390 1219 aa12.6□□□□□ -0.39
GABRE-205ENST00000465405 FAM83GA6ND36 823 aa12.6□□□□□ -0.39
GABRE-205ENST00000465405 GJD4Q96KN9 370 aaPredicted RBP12.6□□□□□ -0.39
GABRE-205ENST00000465405 GLI3P10071 1580 aa12.6□□□□□ -0.39
GABRE-205ENST00000465405 DSG3P32926 999 aa12.59□□□□□ -0.39
GABRE-205ENST00000465405 PPIP5K1Q6PFW1 1433 aa12.59□□□□□ -0.39
GABRE-205ENST00000465405 TONSLQ96HA7 1378 aa12.58□□□□□ -0.4
GABRE-205ENST00000465405 NUTM2GQ5VZR2 741 aa12.58□□□□□ -0.4
GABRE-205ENST00000465405 NWD2Q9ULI1 1742 aa12.58□□□□□ -0.4
GABRE-205ENST00000465405 RALGAPBQ86X10 1494 aa12.58□□□□□ -0.4
GABRE-205ENST00000465405 PHRF1Q9P1Y6 1649 aaKnown RBP12.57□□□□□ -0.4
GABRE-205ENST00000465405 NRAPQ86VF7 1730 aa12.57□□□□□ -0.4
GABRE-205ENST00000465405 VPS72Q15906 364 aa12.56□□□□□ -0.4
GABRE-205ENST00000465405 CABP1Q9NZU7 370 aa12.56□□□□□ -0.4
GABRE-205ENST00000465405 EVC2Q86UK5 1308 aa12.56□□□□□ -0.4
GABRE-205ENST00000465405 COL14A1Q05707 1796 aaKnown RBP12.56□□□□□ -0.4
GABRE-205ENST00000465405 CARD11Q9BXL7 1154 aa12.55□□□□□ -0.4
GABRE-205ENST00000465405 BTG4Q9NY30 223 aa12.55□□□□□ -0.4
GABRE-205ENST00000465405 CCDC9Q9Y3X0 531 aaKnown RBP12.55□□□□□ -0.4
GABRE-205ENST00000465405 ABTB2Q8N961 1025 aa12.54□□□□□ -0.4
GABRE-205ENST00000465405 ATAD2Q6PL18 1390 aa12.54□□□□□ -0.4
GABRE-205ENST00000465405 BRWD3Q6RI45 1802 aa12.53□□□□□ -0.4
GABRE-205ENST00000465405 ZC3H6P61129 1189 aaKnown RBP12.53□□□□□ -0.4
GABRE-205ENST00000465405 CHRNA2Q15822 529 aa12.53□□□□□ -0.4
GABRE-205ENST00000465405 PRDM11Q9NQV5 511 aa12.53□□□□□ -0.4
GABRE-205ENST00000465405 KIAA0232Q92628 1395 aa12.53□□□□□ -0.4
GABRE-205ENST00000465405 USP6P35125 1406 aa12.53□□□□□ -0.4
GABRE-205ENST00000465405 NRKQ7Z2Y5 1582 aa12.52□□□□□ -0.41
GABRE-205ENST00000465405 SEPT12Q8IYM1 358 aa12.51□□□□□ -0.41
GABRE-205ENST00000465405 ONECUT3O60422 494 aaPredicted RBP12.5□□□□□ -0.41
GABRE-205ENST00000465405 USP19O94966 1318 aa12.5□□□□□ -0.41
GABRE-205ENST00000465405 SSH2Q76I76 1423 aa12.5□□□□□ -0.41
GABRE-205ENST00000465405 AKAP12Q02952 1782 aa12.49□□□□□ -0.41
GABRE-205ENST00000465405 BRD4O60885 1362 aaPredicted RBP12.49□□□□□ -0.41
GABRE-205ENST00000465405 SBNO2Q9Y2G9 1366 aa12.49□□□□□ -0.41
GABRE-205ENST00000465405 FAM98CQ17RN3 349 aaKnown RBP12.49□□□□□ -0.41
GABRE-205ENST00000465405 NLRP13Q86W25 1043 aa12.49□□□□□ -0.41
GABRE-205ENST00000465405 PIK3C2AO00443 1686 aa12.48□□□□□ -0.41
GABRE-205ENST00000465405 SPATA31A5Q5VU36 1347 aa12.48□□□□□ -0.41
GABRE-205ENST00000465405 SPATA31A7Q8IWB4 1347 aa12.48□□□□□ -0.41
GABRE-205ENST00000465405 GCP02774 474 aa12.48□□□□□ -0.41
GABRE-205ENST00000465405 NLRP6P59044 892 aa12.48□□□□□ -0.41
GABRE-205ENST00000465405 STRN4Q9NRL3 753 aa12.48□□□□□ -0.41
GABRE-205ENST00000465405 A0A0G2JS52 829 aa12.47□□□□□ -0.41
GABRE-205ENST00000465405 CAPN15O75808 1086 aa12.47□□□□□ -0.41
GABRE-205ENST00000465405 MYT1Q01538 1121 aa12.47□□□□□ -0.41
GABRE-205ENST00000465405 PCGF6Q9BYE7 350 aa12.47□□□□□ -0.41
GABRE-205ENST00000465405 LMO7Q8WWI1 1683 aa12.47□□□□□ -0.41
GABRE-205ENST00000465405 CAMTA1Q9Y6Y1 1673 aa12.47□□□□□ -0.41
GABRE-205ENST00000465405 CPSF1Q10570 1443 aaKnown RBP12.46□□□□□ -0.41
GABRE-205ENST00000465405 CPDO75976 1380 aa12.46□□□□□ -0.41
GABRE-205ENST00000465405 TTC21BQ7Z4L5 1316 aa12.46□□□□□ -0.41
GABRE-205ENST00000465405 ZNF692Q9BU19 519 aaPredicted RBP12.46□□□□□ -0.41
GABRE-205ENST00000465405 SLIT3O75094 1523 aa12.46□□□□□ -0.42
GABRE-205ENST00000465405 KTN1Q86UP2 1357 aaKnown RBP12.45□□□□□ -0.42
GABRE-205ENST00000465405 SPATA31A1Q5TZJ5 1347 aa12.45□□□□□ -0.42
GABRE-205ENST00000465405 ST20-MTHFSA0A0A6YYL1 179 aa12.45□□□□□ -0.42
GABRE-205ENST00000465405 ZBTB7CA1YPR0 619 aa12.45□□□□□ -0.42
GABRE-205ENST00000465405 KRT27Q7Z3Y8 459 aa12.45□□□□□ -0.42
GABRE-205ENST00000465405 CD163L1Q9NR16 1453 aa12.45□□□□□ -0.42
GABRE-205ENST00000465405 MON2Q7Z3U7 1717 aa12.45□□□□□ -0.42
GABRE-205ENST00000465405 THSD7AQ9UPZ6 1657 aa12.45□□□□□ -0.42
GABRE-205ENST00000465405 EVA1CP58658 441 aa12.44□□□□□ -0.42
GABRE-205ENST00000465405 TMC1Q8TDI8 760 aa12.44□□□□□ -0.42
GABRE-205ENST00000465405 TESK2Q96S53 571 aa12.44□□□□□ -0.42
GABRE-205ENST00000465405 SLC12A5Q9H2X9 1139 aa12.44□□□□□ -0.42
GABRE-205ENST00000465405 USP35Q9P2H5 1018 aa12.44□□□□□ -0.42
GABRE-205ENST00000465405 EP400Q96L91 3159 aa12.44□□□□□ -0.42
GABRE-205ENST00000465405 FAM182BQ5T319 152 aa12.43□□□□□ -0.42
GABRE-205ENST00000465405 LARP1Q6PKG0 1096 aaKnown RBP12.43□□□□□ -0.42
GABRE-205ENST00000465405 CCDC125Q86Z20 511 aa12.43□□□□□ -0.42
GABRE-205ENST00000465405 ZRANB1Q9UGI0 708 aa12.43□□□□□ -0.42
GABRE-205ENST00000465405 TTC21AQ8NDW8 1320 aa12.42□□□□□ -0.42
GABRE-205ENST00000465405 SOX12O15370 315 aa12.42□□□□□ -0.42
GABRE-205ENST00000465405 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.42□□□□□ -0.42
GABRE-205ENST00000465405 COL18A1P39060 1754 aa12.42□□□□□ -0.42
GABRE-205ENST00000465405 BLMP54132 1417 aaPredicted RBP12.42□□□□□ -0.42
GABRE-205ENST00000465405 COL5A2P05997 1499 aaPredicted RBP12.41□□□□□ -0.42
GABRE-205ENST00000465405 DEFB132Q7Z7B7 95 aa12.41□□□□□ -0.42
GABRE-205ENST00000465405 AATKQ6ZMQ8 1374 aa12.41□□□□□ -0.42
GABRE-205ENST00000465405 NME9Q86XW9 330 aa12.4□□□□□ -0.42
GABRE-205ENST00000465405 SPINK5Q9NQ38 1064 aaPredicted RBP12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms