RNA–Protein interactions for RNA: ENST00000465268.1

MRPL55-225, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 2

Gene MRPL55, Length 848 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-225ENST00000465268 ABCA3Q99758 1704 aa21.48■■□□□ 1.03
MRPL55-225ENST00000465268 POLR3AO14802 1390 aaPredicted RBP21.48■■□□□ 1.03
MRPL55-225ENST00000465268 BTG4Q9NY30 223 aa21.46■■□□□ 1.03
MRPL55-225ENST00000465268 SRPK2P78362 688 aaKnown RBP21.45■■□□□ 1.02
MRPL55-225ENST00000465268 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.45■■□□□ 1.02
MRPL55-225ENST00000465268 EP400Q96L91 3159 aa21.44■■□□□ 1.02
MRPL55-225ENST00000465268 SEPT12Q8IYM1 358 aa21.44■■□□□ 1.02
MRPL55-225ENST00000465268 CCDC9Q9Y3X0 531 aaKnown RBP21.43■■□□□ 1.02
MRPL55-225ENST00000465268 ONECUT3O60422 494 aaPredicted RBP21.42■■□□□ 1.02
MRPL55-225ENST00000465268 PLCH1Q4KWH8 1693 aa21.42■■□□□ 1.02
MRPL55-225ENST00000465268 TOPAZ1Q8N9V7 1692 aa21.41■■□□□ 1.02
MRPL55-225ENST00000465268 PPIP5K1Q6PFW1 1433 aa21.41■■□□□ 1.02
MRPL55-225ENST00000465268 ROCK2O75116 1388 aaKnown RBP21.4■■□□□ 1.02
MRPL55-225ENST00000465268 CHRNA2Q15822 529 aa21.4■■□□□ 1.02
MRPL55-225ENST00000465268 CABP1Q9NZU7 370 aa21.4■■□□□ 1.02
MRPL55-225ENST00000465268 KIAA0232Q92628 1395 aa21.39■■□□□ 1.02
MRPL55-225ENST00000465268 ZC3H6P61129 1189 aaKnown RBP21.39■■□□□ 1.01
MRPL55-225ENST00000465268 PRDM11Q9NQV5 511 aa21.39■■□□□ 1.01
MRPL55-225ENST00000465268 CRYBG1Q9Y4K1 1723 aa21.38■■□□□ 1.01
MRPL55-225ENST00000465268 TRPM1Q7Z4N2 1603 aa21.38■■□□□ 1.01
MRPL55-225ENST00000465268 FAM98CQ17RN3 349 aaKnown RBP21.38■■□□□ 1.01
MRPL55-225ENST00000465268 ITSN1Q15811 1721 aa21.38■■□□□ 1.01
MRPL55-225ENST00000465268 ABTB2Q8N961 1025 aa21.37■■□□□ 1.01
MRPL55-225ENST00000465268 NWD2Q9ULI1 1742 aa21.37■■□□□ 1.01
MRPL55-225ENST00000465268 NRAPQ86VF7 1730 aa21.35■■□□□ 1.01
MRPL55-225ENST00000465268 QRICH2Q9H0J4 1663 aa21.34■■□□□ 1.01
MRPL55-225ENST00000465268 SPATA31A5Q5VU36 1347 aa21.34■■□□□ 1.01
MRPL55-225ENST00000465268 SPATA31A7Q8IWB4 1347 aa21.34■■□□□ 1.01
MRPL55-225ENST00000465268 COL14A1Q05707 1796 aaKnown RBP21.33■■□□□ 1.01
MRPL55-225ENST00000465268 USP19O94966 1318 aa21.33■■□□□ 1.01
MRPL55-225ENST00000465268 EVC2Q86UK5 1308 aa21.33■■□□□ 1.01
MRPL55-225ENST00000465268 TRIM26Q12899 539 aaPredicted RBP21.33■■□□□ 1.01
MRPL55-225ENST00000465268 KRT27Q7Z3Y8 459 aa21.33■■□□□ 1.01
MRPL55-225ENST00000465268 A0A0G2JS52 829 aa21.31■■□□□ 1
MRPL55-225ENST00000465268 MYT1Q01538 1121 aa21.31■■□□□ 1
MRPL55-225ENST00000465268 STRN4Q9NRL3 753 aa21.31■■□□□ 1
MRPL55-225ENST00000465268 USP6P35125 1406 aa21.3■■□□□ 1
MRPL55-225ENST00000465268 PHRF1Q9P1Y6 1649 aaKnown RBP21.3■■□□□ 1
MRPL55-225ENST00000465268 DEFB132Q7Z7B7 95 aa21.3■■□□□ 1
MRPL55-225ENST00000465268 CCDC125Q86Z20 511 aa21.3■■□□□ 1
MRPL55-225ENST00000465268 SSH2Q76I76 1423 aa21.29■■□□□ 1
MRPL55-225ENST00000465268 GCP02774 474 aa21.29■■□□□ 1
MRPL55-225ENST00000465268 FAM182BQ5T319 152 aa21.29■■□□□ 1
MRPL55-225ENST00000465268 CARD11Q9BXL7 1154 aa21.29■■□□□ 1
MRPL55-225ENST00000465268 BRWD3Q6RI45 1802 aa21.29■■□□□ 1
MRPL55-225ENST00000465268 SPATA31A1Q5TZJ5 1347 aa21.29■■□□□ 1
MRPL55-225ENST00000465268 NRKQ7Z2Y5 1582 aa21.28■■□□□ 1
MRPL55-225ENST00000465268 NLRP13Q86W25 1043 aa21.28■■□□□ 1
MRPL55-225ENST00000465268 BLMP54132 1417 aaPredicted RBP21.28■■□□□ 1
MRPL55-225ENST00000465268 TONSLQ96HA7 1378 aa21.27■■□□□ 1
MRPL55-225ENST00000465268 SRCAPQ6ZRS2 3230 aa21.27■□□□□ 0.99
MRPL55-225ENST00000465268 CPDO75976 1380 aa21.26■□□□□ 0.99
MRPL55-225ENST00000465268 CAMTA1Q9Y6Y1 1673 aa21.26■□□□□ 0.99
MRPL55-225ENST00000465268 NLRP6P59044 892 aa21.26■□□□□ 0.99
MRPL55-225ENST00000465268 LARP1Q6PKG0 1096 aaKnown RBP21.26■□□□□ 0.99
MRPL55-225ENST00000465268 BRD4O60885 1362 aaPredicted RBP21.24■□□□□ 0.99
MRPL55-225ENST00000465268 USP35Q9P2H5 1018 aa21.24■□□□□ 0.99
MRPL55-225ENST00000465268 TTC21BQ7Z4L5 1316 aa21.24■□□□□ 0.99
MRPL55-225ENST00000465268 EVA1CP58658 441 aa21.23■□□□□ 0.99
MRPL55-225ENST00000465268 CPSF1Q10570 1443 aaKnown RBP21.21■□□□□ 0.99
MRPL55-225ENST00000465268 ZBTB7CA1YPR0 619 aa21.21■□□□□ 0.99
MRPL55-225ENST00000465268 THSD7AQ9UPZ6 1657 aa21.21■□□□□ 0.99
MRPL55-225ENST00000465268 SBNO2Q9Y2G9 1366 aa21.2■□□□□ 0.98
MRPL55-225ENST00000465268 LMO7Q8WWI1 1683 aa21.19■□□□□ 0.98
MRPL55-225ENST00000465268 ZNF692Q9BU19 519 aaPredicted RBP21.19■□□□□ 0.98
MRPL55-225ENST00000465268 ZRANB1Q9UGI0 708 aa21.19■□□□□ 0.98
MRPL55-225ENST00000465268 SLIT3O75094 1523 aa21.19■□□□□ 0.98
MRPL55-225ENST00000465268 AXIN2Q9Y2T1 843 aa21.18■□□□□ 0.98
MRPL55-225ENST00000465268 SF3B2Q13435 895 aaKnown RBP21.17■□□□□ 0.98
MRPL55-225ENST00000465268 BARGINQ6ZT62 677 aa21.17■□□□□ 0.98
MRPL55-225ENST00000465268 SLC12A5Q9H2X9 1139 aa21.17■□□□□ 0.98
MRPL55-225ENST00000465268 CD163L1Q9NR16 1453 aa21.17■□□□□ 0.98
MRPL55-225ENST00000465268 PIK3C2AO00443 1686 aa21.17■□□□□ 0.98
MRPL55-225ENST00000465268 COL5A2P05997 1499 aaPredicted RBP21.16■□□□□ 0.98
MRPL55-225ENST00000465268 KTN1Q86UP2 1357 aaKnown RBP21.16■□□□□ 0.98
MRPL55-225ENST00000465268 SOX12O15370 315 aa21.16■□□□□ 0.98
MRPL55-225ENST00000465268 TCP11L2Q8N4U5 519 aa21.16■□□□□ 0.98
MRPL55-225ENST00000465268 AATKQ6ZMQ8 1374 aa21.15■□□□□ 0.98
MRPL55-225ENST00000465268 TESK2Q96S53 571 aa21.15■□□□□ 0.98
MRPL55-225ENST00000465268 ST20-MTHFSA0A0A6YYL1 179 aa21.14■□□□□ 0.97
MRPL55-225ENST00000465268 ARHGEF25Q86VW2 580 aa21.14■□□□□ 0.97
MRPL55-225ENST00000465268 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.14■□□□□ 0.97
MRPL55-225ENST00000465268 TMC1Q8TDI8 760 aa21.14■□□□□ 0.97
MRPL55-225ENST00000465268 TTC21AQ8NDW8 1320 aa21.13■□□□□ 0.97
MRPL55-225ENST00000465268 EN1Q05925 392 aaPredicted RBP21.13■□□□□ 0.97
MRPL55-225ENST00000465268 NME9Q86XW9 330 aa21.12■□□□□ 0.97
MRPL55-225ENST00000465268 TRIM37O94972 964 aa21.1■□□□□ 0.97
MRPL55-225ENST00000465268 BAG6P46379 1132 aa21.1■□□□□ 0.97
MRPL55-225ENST00000465268 THRAP3Q9Y2W1 955 aaKnown RBP21.09■□□□□ 0.97
MRPL55-225ENST00000465268 AKAP12Q02952 1782 aa21.09■□□□□ 0.97
MRPL55-225ENST00000465268 CRB1P82279 1406 aa21.09■□□□□ 0.97
MRPL55-225ENST00000465268 PDE3BQ13370 1112 aa21.08■□□□□ 0.97
MRPL55-225ENST00000465268 FAM196AQ6ZSG2 479 aa21.08■□□□□ 0.97
MRPL55-225ENST00000465268 KCNH5Q8NCM2 988 aa21.08■□□□□ 0.97
MRPL55-225ENST00000465268 COL18A1P39060 1754 aa21.08■□□□□ 0.96
MRPL55-225ENST00000465268 TOM1L2Q6ZVM7 507 aa21.07■□□□□ 0.96
MRPL55-225ENST00000465268 NFAT5O94916 1531 aa21.07■□□□□ 0.96
MRPL55-225ENST00000465268 A0A1W2PP64 1363 aa21.07■□□□□ 0.96
MRPL55-225ENST00000465268 USP31Q70CQ4 1352 aa21.07■□□□□ 0.96
MRPL55-225ENST00000465268 EZH2Q15910 746 aaKnown RBP21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms