RNA–Protein interactions for RNA: ENST00000465229.5

EXOSC3-203, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-203ENST00000465229 BRD4O60885 1362 aaPredicted RBP23.1■■□□□ 1.29
EXOSC3-203ENST00000465229 CGNL1Q0VF96 1302 aa23.1■■□□□ 1.29
EXOSC3-203ENST00000465229 ROBO1Q9Y6N7 1651 aa23.1■■□□□ 1.29
EXOSC3-203ENST00000465229 FYB1O15117 783 aa23.09■■□□□ 1.29
EXOSC3-203ENST00000465229 SOS2Q07890 1332 aaPredicted RBP23.09■■□□□ 1.29
EXOSC3-203ENST00000465229 MON2Q7Z3U7 1717 aa23.09■■□□□ 1.29
EXOSC3-203ENST00000465229 PAK3O75914 559 aaPredicted RBP23.08■■□□□ 1.29
EXOSC3-203ENST00000465229 PXDNQ92626 1479 aa23.07■■□□□ 1.28
EXOSC3-203ENST00000465229 TTC21AQ8NDW8 1320 aa23.07■■□□□ 1.28
EXOSC3-203ENST00000465229 NME9Q86XW9 330 aa23.07■■□□□ 1.28
EXOSC3-203ENST00000465229 CCER2I3L3R5 266 aa23.05■■□□□ 1.28
EXOSC3-203ENST00000465229 ANP32CO43423 234 aa23.05■■□□□ 1.28
EXOSC3-203ENST00000465229 CNGB1Q14028 1251 aaPredicted RBP23.05■■□□□ 1.28
EXOSC3-203ENST00000465229 CC2D1BQ5T0F9 858 aaKnown RBP23.05■■□□□ 1.28
EXOSC3-203ENST00000465229 NPC1L1Q9UHC9 1359 aa23.05■■□□□ 1.28
EXOSC3-203ENST00000465229 YTHDC1Q96MU7 727 aaKnown RBP23.04■■□□□ 1.28
EXOSC3-203ENST00000465229 GGNBP2Q9H3C7 697 aa23.04■■□□□ 1.28
EXOSC3-203ENST00000465229 ZRANB1Q9UGI0 708 aa23.04■■□□□ 1.28
EXOSC3-203ENST00000465229 SBNO1A3KN83 1393 aa23.04■■□□□ 1.28
EXOSC3-203ENST00000465229 NRKQ7Z2Y5 1582 aa23.04■■□□□ 1.28
EXOSC3-203ENST00000465229 ABTB2Q8N961 1025 aa23.04■■□□□ 1.28
EXOSC3-203ENST00000465229 NHSL1Q5SYE7 1610 aa23.02■■□□□ 1.28
EXOSC3-203ENST00000465229 SPATA31A3Q5VYP0 1347 aa23.02■■□□□ 1.28
EXOSC3-203ENST00000465229 AHDC1Q5TGY3 1603 aaPredicted RBP23.01■■□□□ 1.27
EXOSC3-203ENST00000465229 TRPM3Q9HCF6 1732 aaPredicted RBP23.01■■□□□ 1.27
EXOSC3-203ENST00000465229 NUTM2GQ5VZR2 741 aa23■■□□□ 1.27
EXOSC3-203ENST00000465229 LMOD2Q6P5Q4 547 aa23■■□□□ 1.27
EXOSC3-203ENST00000465229 NSD2O96028 1365 aa23■■□□□ 1.27
EXOSC3-203ENST00000465229 NLRP6P59044 892 aa23■■□□□ 1.27
EXOSC3-203ENST00000465229 USP31Q70CQ4 1352 aa22.98■■□□□ 1.27
EXOSC3-203ENST00000465229 LRRC59Q96AG4 307 aaKnown RBP22.98■■□□□ 1.27
EXOSC3-203ENST00000465229 COG3Q96JB2 828 aa22.98■■□□□ 1.27
EXOSC3-203ENST00000465229 TNS3Q68CZ2 1445 aa22.98■■□□□ 1.27
EXOSC3-203ENST00000465229 PRKRIP1Q9H875 184 aaPredicted RBP22.97■■□□□ 1.27
EXOSC3-203ENST00000465229 MORC1Q86VD1 984 aa22.97■■□□□ 1.27
EXOSC3-203ENST00000465229 NLRP13Q86W25 1043 aa22.96■■□□□ 1.27
EXOSC3-203ENST00000465229 PIK3C2AO00443 1686 aa22.95■■□□□ 1.26
EXOSC3-203ENST00000465229 OVOS2A0A0J9YW53 1432 aa22.95■■□□□ 1.26
EXOSC3-203ENST00000465229 OVOS2Q6IE36 1432 aa22.95■■□□□ 1.26
EXOSC3-203ENST00000465229 ARHGEF10O15013 1369 aa22.95■■□□□ 1.26
EXOSC3-203ENST00000465229 RALBP1Q15311 655 aa22.94■■□□□ 1.26
EXOSC3-203ENST00000465229 PARD3Q8TEW0 1356 aa22.94■■□□□ 1.26
EXOSC3-203ENST00000465229 ALS2Q96Q42 1657 aa22.93■■□□□ 1.26
EXOSC3-203ENST00000465229 KIF20BQ96Q89 1820 aa22.92■■□□□ 1.26
EXOSC3-203ENST00000465229 PHLPP1O60346 1717 aa22.92■■□□□ 1.26
EXOSC3-203ENST00000465229 TNNT2P45379 298 aaPredicted RBP22.92■■□□□ 1.26
EXOSC3-203ENST00000465229 COL16A1Q07092 1604 aaPredicted RBP22.91■■□□□ 1.26
EXOSC3-203ENST00000465229 HSPA1LP34931 641 aa22.91■■□□□ 1.26
EXOSC3-203ENST00000465229 PLEKHG5O94827 1062 aa22.9■■□□□ 1.26
EXOSC3-203ENST00000465229 FBLN1P23142 703 aa22.9■■□□□ 1.26
EXOSC3-203ENST00000465229 USP19O94966 1318 aa22.9■■□□□ 1.26
EXOSC3-203ENST00000465229 CABLES1Q8TDN4 633 aa22.9■■□□□ 1.26
EXOSC3-203ENST00000465229 GCP02774 474 aa22.88■■□□□ 1.25
EXOSC3-203ENST00000465229 SOX12O15370 315 aa22.87■■□□□ 1.25
EXOSC3-203ENST00000465229 FBXO41Q8TF61 875 aa22.87■■□□□ 1.25
EXOSC3-203ENST00000465229 PNPLA6Q8IY17 1366 aa22.87■■□□□ 1.25
EXOSC3-203ENST00000465229 PPP2R1AP30153 589 aa22.86■■□□□ 1.25
EXOSC3-203ENST00000465229 USP54Q70EL1 1684 aa22.86■■□□□ 1.25
EXOSC3-203ENST00000465229 KCNH5Q8NCM2 988 aa22.86■■□□□ 1.25
EXOSC3-203ENST00000465229 ANKRD26Q9UPS8 1709 aa22.86■■□□□ 1.25
EXOSC3-203ENST00000465229 MARF1Q9Y4F3 1742 aaKnown RBP22.86■■□□□ 1.25
EXOSC3-203ENST00000465229 MED1Q15648 1581 aaPredicted RBP22.85■■□□□ 1.25
EXOSC3-203ENST00000465229 AATKQ6ZMQ8 1374 aa22.85■■□□□ 1.25
EXOSC3-203ENST00000465229 MYBBP1AQ9BQG0 1328 aaKnown RBP22.84■■□□□ 1.25
EXOSC3-203ENST00000465229 POLKQ9UBT6 870 aa22.83■■□□□ 1.25
EXOSC3-203ENST00000465229 SLIT3O75094 1523 aa22.83■■□□□ 1.25
EXOSC3-203ENST00000465229 RRS1Q15050 365 aaKnown RBP22.82■■□□□ 1.24
EXOSC3-203ENST00000465229 JCADQ9P266 1359 aa22.82■■□□□ 1.24
EXOSC3-203ENST00000465229 MTHFSP49914 203 aa22.8■■□□□ 1.24
EXOSC3-203ENST00000465229 EMILIN1Q9Y6C2 1016 aa22.8■■□□□ 1.24
EXOSC3-203ENST00000465229 MAP3K19Q56UN5 1328 aa22.79■■□□□ 1.24
EXOSC3-203ENST00000465229 ZC3H6P61129 1189 aaKnown RBP22.79■■□□□ 1.24
EXOSC3-203ENST00000465229 NFAT5O94916 1531 aa22.79■■□□□ 1.24
EXOSC3-203ENST00000465229 HAP1P54257 671 aaPredicted RBP22.79■■□□□ 1.24
EXOSC3-203ENST00000465229 ARHGEF25Q86VW2 580 aa22.79■■□□□ 1.24
EXOSC3-203ENST00000465229 COL22A1Q8NFW1 1626 aaPredicted RBP22.77■■□□□ 1.24
EXOSC3-203ENST00000465229 PPM1GO15355 546 aaPredicted RBP22.77■■□□□ 1.24
EXOSC3-203ENST00000465229 CRYBG1Q9Y4K1 1723 aa22.76■■□□□ 1.23
EXOSC3-203ENST00000465229 CCDC184Q52MB2 194 aa22.75■■□□□ 1.23
EXOSC3-203ENST00000465229 GTF3C3Q9Y5Q9 886 aa22.75■■□□□ 1.23
EXOSC3-203ENST00000465229 PHRF1Q9P1Y6 1649 aaKnown RBP22.75■■□□□ 1.23
EXOSC3-203ENST00000465229 NUTM2BA6NNL0 878 aaPredicted RBP22.74■■□□□ 1.23
EXOSC3-203ENST00000465229 NUTM2EB1AL46 878 aaPredicted RBP22.74■■□□□ 1.23
EXOSC3-203ENST00000465229 AMPHP49418 695 aa22.74■■□□□ 1.23
EXOSC3-203ENST00000465229 NUTM2AQ8IVF1 878 aaPredicted RBP22.74■■□□□ 1.23
EXOSC3-203ENST00000465229 CPDO75976 1380 aa22.74■■□□□ 1.23
EXOSC3-203ENST00000465229 KIAA0232Q92628 1395 aa22.74■■□□□ 1.23
EXOSC3-203ENST00000465229 MAP2P11137 1827 aaKnown RBP22.73■■□□□ 1.23
EXOSC3-203ENST00000465229 SMG6Q86US8 1419 aaKnown RBP22.73■■□□□ 1.23
EXOSC3-203ENST00000465229 SHPRHQ149N8 1683 aa22.73■■□□□ 1.23
EXOSC3-203ENST00000465229 ZBTB7CA1YPR0 619 aa22.73■■□□□ 1.23
EXOSC3-203ENST00000465229 SPATA31A6Q5VVP1 1343 aa22.72■■□□□ 1.23
EXOSC3-203ENST00000465229 IP6K1Q92551 441 aa22.71■■□□□ 1.23
EXOSC3-203ENST00000465229 KIF24Q5T7B8 1368 aa22.71■■□□□ 1.23
EXOSC3-203ENST00000465229 HOXC9P31274 260 aa22.71■■□□□ 1.23
EXOSC3-203ENST00000465229 CHRNA2Q15822 529 aa22.71■■□□□ 1.23
EXOSC3-203ENST00000465229 HSP90AB2PQ58FF8 381 aa22.71■■□□□ 1.23
EXOSC3-203ENST00000465229 PRDM11Q9NQV5 511 aa22.71■■□□□ 1.23
EXOSC3-203ENST00000465229 ABCA3Q99758 1704 aa22.7■■□□□ 1.23
EXOSC3-203ENST00000465229 ADAMTS2O95450 1211 aa22.7■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms