RNA–Protein interactions for RNA: ENST00000464800.5

MCF2L-220, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 720 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-220ENST00000464800 THSD7AQ9UPZ6 1657 aa21.58■■□□□ 1.05
MCF2L-220ENST00000464800 MINK1Q8N4C8 1332 aaPredicted RBP21.57■■□□□ 1.04
MCF2L-220ENST00000464800 TRAK1Q9UPV9 953 aa21.57■■□□□ 1.04
MCF2L-220ENST00000464800 PRR36Q9H6K5 1346 aa21.56■■□□□ 1.04
MCF2L-220ENST00000464800 TNS1Q9HBL0 1735 aaKnown RBP21.56■■□□□ 1.04
MCF2L-220ENST00000464800 ARHGEF28Q8N1W1 1705 aaKnown RBP21.55■■□□□ 1.04
MCF2L-220ENST00000464800 PHRF1Q9P1Y6 1649 aaKnown RBP21.54■■□□□ 1.04
MCF2L-220ENST00000464800 SPATA31A5Q5VU36 1347 aa21.54■■□□□ 1.04
MCF2L-220ENST00000464800 SPATA31A7Q8IWB4 1347 aa21.54■■□□□ 1.04
MCF2L-220ENST00000464800 RAB3GAP2Q9H2M9 1393 aa21.53■■□□□ 1.04
MCF2L-220ENST00000464800 PSDA5PKW4 1024 aaPredicted RBP21.53■■□□□ 1.04
MCF2L-220ENST00000464800 WASLO00401 505 aaPredicted RBP21.52■■□□□ 1.04
MCF2L-220ENST00000464800 NGDNQ8NEJ9 315 aaKnown RBP21.52■■□□□ 1.04
MCF2L-220ENST00000464800 PRDM11Q9NQV5 511 aa21.51■■□□□ 1.03
MCF2L-220ENST00000464800 DISP2A7MBM2 1401 aa21.5■■□□□ 1.03
MCF2L-220ENST00000464800 PAK3O75914 559 aaPredicted RBP21.5■■□□□ 1.03
MCF2L-220ENST00000464800 HRCP23327 699 aa21.5■■□□□ 1.03
MCF2L-220ENST00000464800 ATP7BP35670 1465 aa21.5■■□□□ 1.03
MCF2L-220ENST00000464800 KDM2AQ9Y2K7 1162 aa21.49■■□□□ 1.03
MCF2L-220ENST00000464800 EN1Q05925 392 aaPredicted RBP21.48■■□□□ 1.03
MCF2L-220ENST00000464800 FAM182BQ5T319 152 aa21.48■■□□□ 1.03
MCF2L-220ENST00000464800 DCAF11Q8TEB1 546 aa21.48■■□□□ 1.03
MCF2L-220ENST00000464800 TOPAZ1Q8N9V7 1692 aa21.47■■□□□ 1.03
MCF2L-220ENST00000464800 KIAA0232Q92628 1395 aa21.46■■□□□ 1.03
MCF2L-220ENST00000464800 STAC3Q96MF2 364 aa21.45■■□□□ 1.02
MCF2L-220ENST00000464800 SPATA31A1Q5TZJ5 1347 aa21.44■■□□□ 1.02
MCF2L-220ENST00000464800 R3HDM1Q15032 1099 aaKnown RBP21.42■■□□□ 1.02
MCF2L-220ENST00000464800 NRKQ7Z2Y5 1582 aa21.42■■□□□ 1.02
MCF2L-220ENST00000464800 NUDT16Q96DE0 195 aaKnown RBP21.42■■□□□ 1.02
MCF2L-220ENST00000464800 CHRNA2Q15822 529 aa21.41■■□□□ 1.02
MCF2L-220ENST00000464800 STRN4Q9NRL3 753 aa21.41■■□□□ 1.02
MCF2L-220ENST00000464800 RREB1Q92766 1687 aa21.4■■□□□ 1.02
MCF2L-220ENST00000464800 POLR3AO14802 1390 aaPredicted RBP21.39■■□□□ 1.02
MCF2L-220ENST00000464800 KIAA1210Q9ULL0 1709 aa21.39■■□□□ 1.01
MCF2L-220ENST00000464800 EZH2Q15910 746 aaKnown RBP21.39■■□□□ 1.01
MCF2L-220ENST00000464800 FAM196AQ6ZSG2 479 aa21.39■■□□□ 1.01
MCF2L-220ENST00000464800 ZC3H6P61129 1189 aaKnown RBP21.38■■□□□ 1.01
MCF2L-220ENST00000464800 SSH2Q76I76 1423 aa21.38■■□□□ 1.01
MCF2L-220ENST00000464800 LMO7Q8WWI1 1683 aa21.37■■□□□ 1.01
MCF2L-220ENST00000464800 PARD3Q8TEW0 1356 aa21.37■■□□□ 1.01
MCF2L-220ENST00000464800 TRIM37O94972 964 aa21.37■■□□□ 1.01
MCF2L-220ENST00000464800 NUTM2GQ5VZR2 741 aa21.37■■□□□ 1.01
MCF2L-220ENST00000464800 NUP188Q5SRE5 1749 aa21.37■■□□□ 1.01
MCF2L-220ENST00000464800 CDK19Q9BWU1 502 aa21.36■■□□□ 1.01
MCF2L-220ENST00000464800 ACEP12821 1306 aa21.35■■□□□ 1.01
MCF2L-220ENST00000464800 CAMKK2Q96RR4 588 aa21.35■■□□□ 1.01
MCF2L-220ENST00000464800 USP35Q9P2H5 1018 aa21.35■■□□□ 1.01
MCF2L-220ENST00000464800 CAMTA1Q9Y6Y1 1673 aa21.34■■□□□ 1.01
MCF2L-220ENST00000464800 EVA1CP58658 441 aa21.34■■□□□ 1.01
MCF2L-220ENST00000464800 BARGINQ6ZT62 677 aa21.34■■□□□ 1.01
MCF2L-220ENST00000464800 APBA3O96018 575 aa21.33■■□□□ 1.01
MCF2L-220ENST00000464800 CCDC61Q9Y6R9 512 aa21.33■■□□□ 1.01
MCF2L-220ENST00000464800 PARP4Q9UKK3 1724 aaKnown RBP21.32■■□□□ 1
MCF2L-220ENST00000464800 PDE3BQ13370 1112 aa21.32■■□□□ 1
MCF2L-220ENST00000464800 NBPF8Q3BBV2 869 aa21.32■■□□□ 1
MCF2L-220ENST00000464800 CPDO75976 1380 aa21.32■■□□□ 1
MCF2L-220ENST00000464800 USP19O94966 1318 aa21.3■■□□□ 1
MCF2L-220ENST00000464800 PLEKHG3A1L390 1219 aa21.3■■□□□ 1
MCF2L-220ENST00000464800 ABTB2Q8N961 1025 aa21.3■■□□□ 1
MCF2L-220ENST00000464800 LARP1Q6PKG0 1096 aaKnown RBP21.29■■□□□ 1
MCF2L-220ENST00000464800 TCP11L2Q8N4U5 519 aa21.29■■□□□ 1
MCF2L-220ENST00000464800 PPIP5K1Q6PFW1 1433 aa21.27■■□□□ 1
MCF2L-220ENST00000464800 QRICH2Q9H0J4 1663 aa21.27■■□□□ 1
MCF2L-220ENST00000464800 COL5A2P05997 1499 aaPredicted RBP21.26■□□□□ 0.99
MCF2L-220ENST00000464800 NLRP13Q86W25 1043 aa21.25■□□□□ 0.99
MCF2L-220ENST00000464800 THRAP3Q9Y2W1 955 aaKnown RBP21.25■□□□□ 0.99
MCF2L-220ENST00000464800 RGPD3A6NKT7 1758 aaPredicted RBP21.25■□□□□ 0.99
MCF2L-220ENST00000464800 RGPD4Q7Z3J3 1758 aa21.25■□□□□ 0.99
MCF2L-220ENST00000464800 NBPF14Q5TI25 921 aa21.24■□□□□ 0.99
MCF2L-220ENST00000464800 LRRC37A3O60309 1634 aa21.24■□□□□ 0.99
MCF2L-220ENST00000464800 PEAK1Q9H792 1746 aa21.24■□□□□ 0.99
MCF2L-220ENST00000464800 WNK3Q9BYP7 1800 aa21.23■□□□□ 0.99
MCF2L-220ENST00000464800 SRPK2P78362 688 aaKnown RBP21.23■□□□□ 0.99
MCF2L-220ENST00000464800 BRD4O60885 1362 aaPredicted RBP21.23■□□□□ 0.99
MCF2L-220ENST00000464800 SBF2Q86WG5 1849 aa21.22■□□□□ 0.99
MCF2L-220ENST00000464800 CRB1P82279 1406 aa21.22■□□□□ 0.99
MCF2L-220ENST00000464800 GCP02774 474 aa21.22■□□□□ 0.99
MCF2L-220ENST00000464800 CENPJQ9HC77 1338 aaPredicted RBP21.21■□□□□ 0.99
MCF2L-220ENST00000464800 OVOS2A0A0G2JMS6 1433 aa21.21■□□□□ 0.99
MCF2L-220ENST00000464800 OVOS2A0A0J9YW53 1432 aa21.21■□□□□ 0.99
MCF2L-220ENST00000464800 OVOS2Q6IE36 1432 aa21.21■□□□□ 0.99
MCF2L-220ENST00000464800 SLIT3O75094 1523 aa21.2■□□□□ 0.98
MCF2L-220ENST00000464800 C11orf95C9JLR9 678 aaPredicted RBP21.2■□□□□ 0.98
MCF2L-220ENST00000464800 NBPF1Q3BBV0 1214 aa21.2■□□□□ 0.98
MCF2L-220ENST00000464800 USP6P35125 1406 aa21.19■□□□□ 0.98
MCF2L-220ENST00000464800 PIK3C2AO00443 1686 aa21.18■□□□□ 0.98
MCF2L-220ENST00000464800 CABP2Q9NPB3 220 aa21.18■□□□□ 0.98
MCF2L-220ENST00000464800 AKAP12Q02952 1782 aa21.18■□□□□ 0.98
MCF2L-220ENST00000464800 ZBTB7CA1YPR0 619 aa21.17■□□□□ 0.98
MCF2L-220ENST00000464800 COL18A1P39060 1754 aa21.16■□□□□ 0.98
MCF2L-220ENST00000464800 AATKQ6ZMQ8 1374 aa21.16■□□□□ 0.98
MCF2L-220ENST00000464800 SPON1Q9HCB6 807 aa21.15■□□□□ 0.98
MCF2L-220ENST00000464800 PPP1R1BQ9UD71 204 aaPredicted RBP21.15■□□□□ 0.98
MCF2L-220ENST00000464800 NLRP6P59044 892 aa21.14■□□□□ 0.97
MCF2L-220ENST00000464800 CASZ1Q86V15 1759 aa21.13■□□□□ 0.97
MCF2L-220ENST00000464800 NINLQ9Y2I6 1382 aa21.12■□□□□ 0.97
MCF2L-220ENST00000464800 TRPM1Q7Z4N2 1603 aa21.12■□□□□ 0.97
MCF2L-220ENST00000464800 KCNQ2O43526 872 aa21.12■□□□□ 0.97
MCF2L-220ENST00000464800 YY1P25490 414 aa21.12■□□□□ 0.97
MCF2L-220ENST00000464800 DDB1Q16531 1140 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms