RNA–Protein interactions for RNA: ENST00000464363.5

NELFCD-202, Transcript of negative elongation factor complex member C/D, humanhuman

TSL 2

Gene NELFCD, Length 764 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-202ENST00000464363 ABCA3Q99758 1704 aa25.2■■□□□ 1.62
NELFCD-202ENST00000464363 ACEP12821 1306 aa25.19■■□□□ 1.62
NELFCD-202ENST00000464363 POLR3AO14802 1390 aaPredicted RBP25.18■■□□□ 1.62
NELFCD-202ENST00000464363 NWD2Q9ULI1 1742 aa25.18■■□□□ 1.62
NELFCD-202ENST00000464363 BTG4Q9NY30 223 aa25.18■■□□□ 1.62
NELFCD-202ENST00000464363 CCDC125Q86Z20 511 aa25.17■■□□□ 1.62
NELFCD-202ENST00000464363 GLI3P10071 1580 aa25.16■■□□□ 1.62
NELFCD-202ENST00000464363 PLCH1Q4KWH8 1693 aa25.16■■□□□ 1.62
NELFCD-202ENST00000464363 SEPT12Q8IYM1 358 aa25.15■■□□□ 1.62
NELFCD-202ENST00000464363 CABP2Q9NPB3 220 aa25.15■■□□□ 1.62
NELFCD-202ENST00000464363 PRDM11Q9NQV5 511 aa25.15■■□□□ 1.62
NELFCD-202ENST00000464363 ROCK2O75116 1388 aaKnown RBP25.15■■□□□ 1.62
NELFCD-202ENST00000464363 ONECUT3O60422 494 aaPredicted RBP25.13■■□□□ 1.61
NELFCD-202ENST00000464363 ABTB2Q8N961 1025 aa25.12■■□□□ 1.61
NELFCD-202ENST00000464363 TOPAZ1Q8N9V7 1692 aa25.12■■□□□ 1.61
NELFCD-202ENST00000464363 PPIP5K1Q6PFW1 1433 aa25.12■■□□□ 1.61
NELFCD-202ENST00000464363 EVC2Q86UK5 1308 aa25.12■■□□□ 1.61
NELFCD-202ENST00000464363 COL14A1Q05707 1796 aaKnown RBP25.11■■□□□ 1.61
NELFCD-202ENST00000464363 NUTM2GQ5VZR2 741 aa25.11■■□□□ 1.61
NELFCD-202ENST00000464363 A0A0G2JS52 829 aa25.1■■□□□ 1.61
NELFCD-202ENST00000464363 MYT1Q01538 1121 aa25.1■■□□□ 1.61
NELFCD-202ENST00000464363 TRPM1Q7Z4N2 1603 aa25.09■■□□□ 1.61
NELFCD-202ENST00000464363 QRICH2Q9H0J4 1663 aa25.09■■□□□ 1.61
NELFCD-202ENST00000464363 ZC3H6P61129 1189 aaKnown RBP25.07■■□□□ 1.6
NELFCD-202ENST00000464363 KRT27Q7Z3Y8 459 aa25.07■■□□□ 1.6
NELFCD-202ENST00000464363 CABP1Q9NZU7 370 aa25.07■■□□□ 1.6
NELFCD-202ENST00000464363 BRD4O60885 1362 aaPredicted RBP25.06■■□□□ 1.6
NELFCD-202ENST00000464363 KIAA0232Q92628 1395 aa25.06■■□□□ 1.6
NELFCD-202ENST00000464363 TRIM26Q12899 539 aaPredicted RBP25.06■■□□□ 1.6
NELFCD-202ENST00000464363 FAM98CQ17RN3 349 aaKnown RBP25.06■■□□□ 1.6
NELFCD-202ENST00000464363 NLRP13Q86W25 1043 aa25.06■■□□□ 1.6
NELFCD-202ENST00000464363 CRYBG1Q9Y4K1 1723 aa25.05■■□□□ 1.6
NELFCD-202ENST00000464363 EP400Q96L91 3159 aa25.05■■□□□ 1.6
NELFCD-202ENST00000464363 CHRNA2Q15822 529 aa25.04■■□□□ 1.6
NELFCD-202ENST00000464363 NRAPQ86VF7 1730 aa25.03■■□□□ 1.6
NELFCD-202ENST00000464363 SF3B2Q13435 895 aaKnown RBP25.03■■□□□ 1.6
NELFCD-202ENST00000464363 SPATA31A5Q5VU36 1347 aa25.03■■□□□ 1.6
NELFCD-202ENST00000464363 SPATA31A7Q8IWB4 1347 aa25.03■■□□□ 1.6
NELFCD-202ENST00000464363 TONSLQ96HA7 1378 aa25.03■■□□□ 1.6
NELFCD-202ENST00000464363 BLMP54132 1417 aaPredicted RBP25.02■■□□□ 1.6
NELFCD-202ENST00000464363 EVA1CP58658 441 aa25.01■■□□□ 1.59
NELFCD-202ENST00000464363 STRN4Q9NRL3 753 aa25.01■■□□□ 1.59
NELFCD-202ENST00000464363 CARD11Q9BXL7 1154 aa25■■□□□ 1.59
NELFCD-202ENST00000464363 PHRF1Q9P1Y6 1649 aaKnown RBP25■■□□□ 1.59
NELFCD-202ENST00000464363 BRWD3Q6RI45 1802 aa25■■□□□ 1.59
NELFCD-202ENST00000464363 USP19O94966 1318 aa24.99■■□□□ 1.59
NELFCD-202ENST00000464363 GCP02774 474 aa24.99■■□□□ 1.59
NELFCD-202ENST00000464363 ZNF692Q9BU19 519 aaPredicted RBP24.99■■□□□ 1.59
NELFCD-202ENST00000464363 ZRANB1Q9UGI0 708 aa24.99■■□□□ 1.59
NELFCD-202ENST00000464363 USP6P35125 1406 aa24.98■■□□□ 1.59
NELFCD-202ENST00000464363 CPDO75976 1380 aa24.97■■□□□ 1.59
NELFCD-202ENST00000464363 NLRP6P59044 892 aa24.97■■□□□ 1.59
NELFCD-202ENST00000464363 SPATA31A1Q5TZJ5 1347 aa24.96■■□□□ 1.59
NELFCD-202ENST00000464363 NRKQ7Z2Y5 1582 aa24.93■■□□□ 1.58
NELFCD-202ENST00000464363 USP35Q9P2H5 1018 aa24.92■■□□□ 1.58
NELFCD-202ENST00000464363 SBNO2Q9Y2G9 1366 aa24.92■■□□□ 1.58
NELFCD-202ENST00000464363 SSH2Q76I76 1423 aa24.9■■□□□ 1.58
NELFCD-202ENST00000464363 ZBTB7CA1YPR0 619 aa24.89■■□□□ 1.58
NELFCD-202ENST00000464363 DEFB132Q7Z7B7 95 aa24.89■■□□□ 1.58
NELFCD-202ENST00000464363 TTC21BQ7Z4L5 1316 aa24.88■■□□□ 1.57
NELFCD-202ENST00000464363 CAMTA1Q9Y6Y1 1673 aa24.88■■□□□ 1.57
NELFCD-202ENST00000464363 LARP1Q6PKG0 1096 aaKnown RBP24.88■■□□□ 1.57
NELFCD-202ENST00000464363 BARGINQ6ZT62 677 aa24.88■■□□□ 1.57
NELFCD-202ENST00000464363 TTC21AQ8NDW8 1320 aa24.87■■□□□ 1.57
NELFCD-202ENST00000464363 BAG6P46379 1132 aa24.87■■□□□ 1.57
NELFCD-202ENST00000464363 TCP11L2Q8N4U5 519 aa24.87■■□□□ 1.57
NELFCD-202ENST00000464363 KTN1Q86UP2 1357 aaKnown RBP24.86■■□□□ 1.57
NELFCD-202ENST00000464363 KCNH5Q8NCM2 988 aa24.86■■□□□ 1.57
NELFCD-202ENST00000464363 THSD7AQ9UPZ6 1657 aa24.85■■□□□ 1.57
NELFCD-202ENST00000464363 FAM182BQ5T319 152 aa24.85■■□□□ 1.57
NELFCD-202ENST00000464363 THRAP3Q9Y2W1 955 aaKnown RBP24.85■■□□□ 1.57
NELFCD-202ENST00000464363 CPSF1Q10570 1443 aaKnown RBP24.85■■□□□ 1.57
NELFCD-202ENST00000464363 AATKQ6ZMQ8 1374 aa24.84■■□□□ 1.57
NELFCD-202ENST00000464363 PDE3BQ13370 1112 aa24.84■■□□□ 1.57
NELFCD-202ENST00000464363 SLIT3O75094 1523 aa24.83■■□□□ 1.57
NELFCD-202ENST00000464363 LMO7Q8WWI1 1683 aa24.83■■□□□ 1.57
NELFCD-202ENST00000464363 FAM196AQ6ZSG2 479 aa24.83■■□□□ 1.57
NELFCD-202ENST00000464363 TMC1Q8TDI8 760 aa24.83■■□□□ 1.57
NELFCD-202ENST00000464363 SLC24A1O60721 1099 aa24.82■■□□□ 1.56
NELFCD-202ENST00000464363 COL5A2P05997 1499 aaPredicted RBP24.81■■□□□ 1.56
NELFCD-202ENST00000464363 PIK3C2AO00443 1686 aa24.81■■□□□ 1.56
NELFCD-202ENST00000464363 HDGFL2Q7Z4V5 671 aaPredicted RBP24.8■■□□□ 1.56
NELFCD-202ENST00000464363 PUS7Q96PZ0 661 aaKnown RBP24.8■■□□□ 1.56
NELFCD-202ENST00000464363 AKAP12Q02952 1782 aa24.8■■□□□ 1.56
NELFCD-202ENST00000464363 CRB1P82279 1406 aa24.78■■□□□ 1.56
NELFCD-202ENST00000464363 SOX12O15370 315 aa24.78■■□□□ 1.56
NELFCD-202ENST00000464363 ARHGEF25Q86VW2 580 aa24.78■■□□□ 1.56
NELFCD-202ENST00000464363 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.78■■□□□ 1.56
NELFCD-202ENST00000464363 TERF2IPQ9NYB0 399 aa24.78■■□□□ 1.56
NELFCD-202ENST00000464363 TOM1L2Q6ZVM7 507 aa24.77■■□□□ 1.56
NELFCD-202ENST00000464363 SLC12A5Q9H2X9 1139 aa24.76■■□□□ 1.55
NELFCD-202ENST00000464363 ST20-MTHFSA0A0A6YYL1 179 aa24.75■■□□□ 1.55
NELFCD-202ENST00000464363 EN1Q05925 392 aaPredicted RBP24.75■■□□□ 1.55
NELFCD-202ENST00000464363 RGPD1P0DJD0 1748 aa24.75■■□□□ 1.55
NELFCD-202ENST00000464363 TRIM37O94972 964 aa24.74■■□□□ 1.55
NELFCD-202ENST00000464363 AXIN2Q9Y2T1 843 aa24.74■■□□□ 1.55
NELFCD-202ENST00000464363 C11orf95C9JLR9 678 aaPredicted RBP24.73■■□□□ 1.55
NELFCD-202ENST00000464363 WDR17Q8IZU2 1322 aa24.72■■□□□ 1.55
NELFCD-202ENST00000464363 CSB-PGBD3P0DP91 1061 aa24.72■■□□□ 1.55
NELFCD-202ENST00000464363 USP31Q70CQ4 1352 aa24.71■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms