RNA–Protein interactions for RNA: ENST00000463578.1

HMGN1P8-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 8, humanhuman

BASIC

Gene HMGN1P8, Length 288 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P8-201ENST00000463578 GZF1Q9H116 711 aaPredicted RBP10.64□□□□□ -0.71
HMGN1P8-201ENST00000463578 ATG7O95352 703 aa10.63□□□□□ -0.71
HMGN1P8-201ENST00000463578 CSB-PGBD3P0DP91 1061 aa10.63□□□□□ -0.71
HMGN1P8-201ENST00000463578 PRR14Q9BWN1 585 aa10.63□□□□□ -0.71
HMGN1P8-201ENST00000463578 SOWAHBA6NEL2 793 aa10.62□□□□□ -0.71
HMGN1P8-201ENST00000463578 CDCA8Q53HL2 280 aa10.62□□□□□ -0.71
HMGN1P8-201ENST00000463578 SCUBE3Q8IX30 993 aa10.62□□□□□ -0.71
HMGN1P8-201ENST00000463578 MAP10Q9P2G4 905 aa10.62□□□□□ -0.71
HMGN1P8-201ENST00000463578 FKBPLQ9UIM3 349 aa10.62□□□□□ -0.71
HMGN1P8-201ENST00000463578 TMEM88BA6NKF7 163 aa10.61□□□□□ -0.71
HMGN1P8-201ENST00000463578 ATP9BO43861 1147 aa10.61□□□□□ -0.71
HMGN1P8-201ENST00000463578 BRD1O95696 1058 aa10.61□□□□□ -0.71
HMGN1P8-201ENST00000463578 RANGAP1P46060 587 aaPredicted RBP10.61□□□□□ -0.71
HMGN1P8-201ENST00000463578 EIF4G2P78344 907 aaKnown RBP eCLIP10.61□□□□□ -0.71
HMGN1P8-201ENST00000463578 PNMA1Q8ND90 353 aa10.61□□□□□ -0.71
HMGN1P8-201ENST00000463578 ZBBXA8MT70 800 aa10.6□□□□□ -0.71
HMGN1P8-201ENST00000463578 PIK3CDO00329 1044 aa10.6□□□□□ -0.71
HMGN1P8-201ENST00000463578 JUNDP17535 347 aa10.6□□□□□ -0.71
HMGN1P8-201ENST00000463578 BCAMP50895 628 aa10.6□□□□□ -0.71
HMGN1P8-201ENST00000463578 HPS5Q9UPZ3 1129 aa10.6□□□□□ -0.71
HMGN1P8-201ENST00000463578 PTPRNQ16849 979 aa10.59□□□□□ -0.71
HMGN1P8-201ENST00000463578 RGS22Q8NE09 1264 aa10.59□□□□□ -0.71
HMGN1P8-201ENST00000463578 ANKK1Q8NFD2 765 aa10.59□□□□□ -0.71
HMGN1P8-201ENST00000463578 FMNL1O95466 1100 aaPredicted RBP10.58□□□□□ -0.72
HMGN1P8-201ENST00000463578 PPP4CP60510 307 aa10.58□□□□□ -0.72
HMGN1P8-201ENST00000463578 KCNA1Q09470 495 aa10.58□□□□□ -0.72
HMGN1P8-201ENST00000463578 KANK4Q5T7N3 995 aaPredicted RBP10.58□□□□□ -0.72
HMGN1P8-201ENST00000463578 ZC3H4Q9UPT8 1303 aaKnown RBP10.58□□□□□ -0.72
HMGN1P8-201ENST00000463578 TMCO4Q5TGY1 634 aa10.57□□□□□ -0.72
HMGN1P8-201ENST00000463578 TSR3Q9UJK0 312 aaKnown RBP10.57□□□□□ -0.72
HMGN1P8-201ENST00000463578 PCDHB3Q9Y5E6 796 aa10.57□□□□□ -0.72
HMGN1P8-201ENST00000463578 NR1I2O75469 434 aa10.56□□□□□ -0.72
HMGN1P8-201ENST00000463578 PTPN5P54829 565 aa10.56□□□□□ -0.72
HMGN1P8-201ENST00000463578 OCSTAMPQ9BR26 566 aa10.56□□□□□ -0.72
HMGN1P8-201ENST00000463578 FAM160A2Q8N612 972 aaPredicted RBP10.55□□□□□ -0.72
HMGN1P8-201ENST00000463578 NFATC2IPQ8NCF5 419 aa10.55□□□□□ -0.72
HMGN1P8-201ENST00000463578 FAM174AQ8TBP5 190 aa10.55□□□□□ -0.72
HMGN1P8-201ENST00000463578 DXOO77932 396 aaKnown RBP10.54□□□□□ -0.72
HMGN1P8-201ENST00000463578 MFAP1P55081 439 aaKnown RBP10.54□□□□□ -0.72
HMGN1P8-201ENST00000463578 MSS51Q4VC12 460 aa10.54□□□□□ -0.72
HMGN1P8-201ENST00000463578 VRTNQ9H8Y1 702 aa10.54□□□□□ -0.72
HMGN1P8-201ENST00000463578 PATL2C9JE40 543 aaKnown RBP10.53□□□□□ -0.72
HMGN1P8-201ENST00000463578 ZMIZ1Q9ULJ6 1067 aa10.53□□□□□ -0.72
HMGN1P8-201ENST00000463578 ELOAQ14241 798 aaKnown RBP10.52□□□□□ -0.73
HMGN1P8-201ENST00000463578 EVA1BQ9NVM1 165 aa10.52□□□□□ -0.73
HMGN1P8-201ENST00000463578 MTMR7Q9Y216 660 aa10.52□□□□□ -0.73
HMGN1P8-201ENST00000463578 USP17L3A6NCW0 530 aa10.51□□□□□ -0.73
HMGN1P8-201ENST00000463578 USP17L4A6NCW7 530 aa10.51□□□□□ -0.73
HMGN1P8-201ENST00000463578 CCNYL3P0C7X3 344 aa10.51□□□□□ -0.73
HMGN1P8-201ENST00000463578 MMP16P51512 607 aa10.51□□□□□ -0.73
HMGN1P8-201ENST00000463578 USP17L2Q6R6M4 530 aa10.51□□□□□ -0.73
HMGN1P8-201ENST00000463578 USP17L1Q7RTZ2 530 aa10.51□□□□□ -0.73
HMGN1P8-201ENST00000463578 PLEKHM2Q8IWE5 1019 aa10.51□□□□□ -0.73
HMGN1P8-201ENST00000463578 WNT2BQ93097 391 aa10.51□□□□□ -0.73
HMGN1P8-201ENST00000463578 PRDM9Q9NQV7 894 aa10.51□□□□□ -0.73
HMGN1P8-201ENST00000463578 WBP1LQ9NX94 342 aa10.51□□□□□ -0.73
HMGN1P8-201ENST00000463578 GOLGA8CPA6NN73 597 aa10.5□□□□□ -0.73
HMGN1P8-201ENST00000463578 CTHP32929 405 aa10.5□□□□□ -0.73
HMGN1P8-201ENST00000463578 STK32AQ8WU08 396 aa10.5□□□□□ -0.73
HMGN1P8-201ENST00000463578 GPSM3Q9Y4H4 160 aa10.5□□□□□ -0.73
HMGN1P8-201ENST00000463578 USP17L5A8MUK1 530 aa10.49□□□□□ -0.73
HMGN1P8-201ENST00000463578 SKIP12755 728 aa10.49□□□□□ -0.73
HMGN1P8-201ENST00000463578 KCNH2Q12809 1159 aa10.49□□□□□ -0.73
HMGN1P8-201ENST00000463578 PHTF2Q8N3S3 785 aa10.49□□□□□ -0.73
HMGN1P8-201ENST00000463578 CEP126Q9P2H0 1117 aa10.49□□□□□ -0.73
HMGN1P8-201ENST00000463578 TMEM164Q5U3C3 297 aa10.48□□□□□ -0.73
HMGN1P8-201ENST00000463578 PDXDC2PQ6P474 469 aa10.48□□□□□ -0.73
HMGN1P8-201ENST00000463578 SPSB2Q99619 263 aa10.48□□□□□ -0.73
HMGN1P8-201ENST00000463578 NUDT12Q9BQG2 462 aa10.48□□□□□ -0.73
HMGN1P8-201ENST00000463578 IVNS1ABPQ9Y6Y0 642 aa10.48□□□□□ -0.73
HMGN1P8-201ENST00000463578 DEPDC4Q8N2C3 294 aa10.47□□□□□ -0.73
HMGN1P8-201ENST00000463578 IRX2Q9BZI1 471 aaPredicted RBP10.47□□□□□ -0.73
HMGN1P8-201ENST00000463578 GPKOWQ92917 476 aaPredicted RBP eCLIP10.46□□□□□ -0.73
HMGN1P8-201ENST00000463578 STAC3Q96MF2 364 aa10.46□□□□□ -0.73
HMGN1P8-201ENST00000463578 CHIC2Q9UKJ5 165 aa10.46□□□□□ -0.73
HMGN1P8-201ENST00000463578 COPS2P61201 443 aa10.45□□□□□ -0.74
HMGN1P8-201ENST00000463578 PTK2Q05397 1052 aa10.45□□□□□ -0.74
HMGN1P8-201ENST00000463578 CRTC2Q53ET0 693 aaPredicted RBP10.45□□□□□ -0.74
HMGN1P8-201ENST00000463578 SLAIN2Q9P270 581 aa10.45□□□□□ -0.74
HMGN1P8-201ENST00000463578 NOVA2Q9UNW9 492 aaKnown RBP10.45□□□□□ -0.74
HMGN1P8-201ENST00000463578 TLL1O43897 1013 aa10.44□□□□□ -0.74
HMGN1P8-201ENST00000463578 PHLDB3Q6NSJ2 640 aa10.44□□□□□ -0.74
HMGN1P8-201ENST00000463578 ARMC2Q8NEN0 867 aa10.44□□□□□ -0.74
HMGN1P8-201ENST00000463578 GNEQ9Y223 722 aaKnown RBP10.44□□□□□ -0.74
HMGN1P8-201ENST00000463578 FAM196BA6NMK8 535 aa10.43□□□□□ -0.74
HMGN1P8-201ENST00000463578 PTCRAQ6ISU1 281 aaPredicted RBP10.43□□□□□ -0.74
HMGN1P8-201ENST00000463578 SH3BP5LQ7L8J4 393 aa10.43□□□□□ -0.74
HMGN1P8-201ENST00000463578 MKRN1Q9UHC7 482 aaKnown RBP10.43□□□□□ -0.74
HMGN1P8-201ENST00000463578 PCDHB9Q9Y5E1 797 aa10.43□□□□□ -0.74
HMGN1P8-201ENST00000463578 USP17L15C9J2P7 530 aa10.42□□□□□ -0.74
HMGN1P8-201ENST00000463578 USP17L10C9JJH3 530 aa10.42□□□□□ -0.74
HMGN1P8-201ENST00000463578 USP17L13C9JLJ4 530 aa10.42□□□□□ -0.74
HMGN1P8-201ENST00000463578 USP17L12C9JPN9 530 aa10.42□□□□□ -0.74
HMGN1P8-201ENST00000463578 USP17L11C9JVI0 530 aa10.42□□□□□ -0.74
HMGN1P8-201ENST00000463578 USP17L21D6R901 530 aa10.42□□□□□ -0.74
HMGN1P8-201ENST00000463578 USP17L18D6R9N7 530 aa10.42□□□□□ -0.74
HMGN1P8-201ENST00000463578 USP17L22D6RA61 530 aa10.42□□□□□ -0.74
HMGN1P8-201ENST00000463578 USP17L17D6RBQ6 530 aa10.42□□□□□ -0.74
HMGN1P8-201ENST00000463578 USP17L19D6RCP7 530 aa10.42□□□□□ -0.74
HMGN1P8-201ENST00000463578 USP17L20D6RJB6 530 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms