RNA–Protein interactions for RNA: ENST00000463003.1

CHAMP1-202, Transcript of chromosome alignment maintaining phosphoprotein 1, humanhuman

TSL 3

Gene CHAMP1, Length 596 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1-202ENST00000463003 PARP9Q8IXQ6 854 aa9.53□□□□□ -0.88
CHAMP1-202ENST00000463003 MPNDQ8N594 471 aa9.53□□□□□ -0.88
CHAMP1-202ENST00000463003 TRIM66O15016 1216 aa9.52□□□□□ -0.89
CHAMP1-202ENST00000463003 LYPD8Q6UX82 237 aa9.52□□□□□ -0.89
CHAMP1-202ENST00000463003 STK17AQ9UEE5 414 aa9.52□□□□□ -0.89
CHAMP1-202ENST00000463003 SPTLC1O15269 473 aa9.51□□□□□ -0.89
CHAMP1-202ENST00000463003 CTHP32929 405 aa9.51□□□□□ -0.89
CHAMP1-202ENST00000463003 ZBTB3Q9H5J0 574 aa9.51□□□□□ -0.89
CHAMP1-202ENST00000463003 TLL2Q9Y6L7 1015 aa9.51□□□□□ -0.89
CHAMP1-202ENST00000463003 BMP1P13497 986 aa9.5□□□□□ -0.89
CHAMP1-202ENST00000463003 PRPF38BQ5VTL8 546 aaKnown RBP9.5□□□□□ -0.89
CHAMP1-202ENST00000463003 TRIM46Q7Z4K8 759 aa9.5□□□□□ -0.89
CHAMP1-202ENST00000463003 SLC16A10Q8TF71 515 aa9.5□□□□□ -0.89
CHAMP1-202ENST00000463003 NXF1Q9UBU9 619 aaKnown RBP9.49□□□□□ -0.89
CHAMP1-202ENST00000463003 HRCP23327 699 aa9.48□□□□□ -0.89
CHAMP1-202ENST00000463003 NNTQ13423 1086 aa9.48□□□□□ -0.89
CHAMP1-202ENST00000463003 RIC3Q7Z5B4 369 aa9.48□□□□□ -0.89
CHAMP1-202ENST00000463003 NPAS3Q8IXF0 933 aa9.48□□□□□ -0.89
CHAMP1-202ENST00000463003 FAM174AQ8TBP5 190 aa9.48□□□□□ -0.89
CHAMP1-202ENST00000463003 PCDHB15Q9Y5E8 787 aa9.48□□□□□ -0.89
CHAMP1-202ENST00000463003 CFAP99D6REC4 459 aa9.47□□□□□ -0.89
CHAMP1-202ENST00000463003 PRKCSHP14314 528 aaPredicted RBP9.46□□□□□ -0.9
CHAMP1-202ENST00000463003 PDE4DQ08499 809 aa9.46□□□□□ -0.9
CHAMP1-202ENST00000463003 ADH1CP00326 375 aa9.45□□□□□ -0.9
CHAMP1-202ENST00000463003 F12P00748 615 aaPredicted RBP9.45□□□□□ -0.9
CHAMP1-202ENST00000463003 LCE2CQ5TA81 110 aa9.45□□□□□ -0.9
CHAMP1-202ENST00000463003 ZFP42Q96MM3 310 aa9.44□□□□□ -0.9
CHAMP1-202ENST00000463003 MAP10Q9P2G4 905 aa9.44□□□□□ -0.9
CHAMP1-202ENST00000463003 SCARF1Q14162 830 aa9.43□□□□□ -0.9
CHAMP1-202ENST00000463003 TUSC1Q2TAM9 212 aa9.43□□□□□ -0.9
CHAMP1-202ENST00000463003 IRF7Q92985 503 aa9.43□□□□□ -0.9
CHAMP1-202ENST00000463003 CDK15Q96Q40 435 aa9.43□□□□□ -0.9
CHAMP1-202ENST00000463003 TIMP2P16035 220 aa9.42□□□□□ -0.9
CHAMP1-202ENST00000463003 WDR4P57081 412 aaKnown RBP9.42□□□□□ -0.9
CHAMP1-202ENST00000463003 MRPL14Q6P1L8 145 aaKnown RBP9.42□□□□□ -0.9
CHAMP1-202ENST00000463003 CABLES1Q8TDN4 633 aa9.42□□□□□ -0.9
CHAMP1-202ENST00000463003 AGERQ15109 404 aa9.41□□□□□ -0.9
CHAMP1-202ENST00000463003 CSPP1Q1MSJ5 1256 aa9.41□□□□□ -0.9
CHAMP1-202ENST00000463003 BPHLQ86WA6 291 aaPredicted RBP9.41□□□□□ -0.9
CHAMP1-202ENST00000463003 ARMC2Q8NEN0 867 aa9.41□□□□□ -0.9
CHAMP1-202ENST00000463003 FOXJ1Q92949 421 aa9.41□□□□□ -0.9
CHAMP1-202ENST00000463003 NUTM2BA6NNL0 878 aaPredicted RBP9.4□□□□□ -0.9
CHAMP1-202ENST00000463003 NUTM2EB1AL46 878 aaPredicted RBP9.4□□□□□ -0.9
CHAMP1-202ENST00000463003 ARID5BQ14865 1188 aa9.4□□□□□ -0.9
CHAMP1-202ENST00000463003 NUTM2DQ5VT03 806 aaPredicted RBP9.4□□□□□ -0.9
CHAMP1-202ENST00000463003 MYSM1Q5VVJ2 828 aa9.4□□□□□ -0.9
CHAMP1-202ENST00000463003 NUTM2AQ8IVF1 878 aaPredicted RBP9.4□□□□□ -0.9
CHAMP1-202ENST00000463003 FAM181BA6NEQ2 426 aa9.39□□□□□ -0.91
CHAMP1-202ENST00000463003 H3BM21 787 aa9.39□□□□□ -0.91
CHAMP1-202ENST00000463003 NR5A1Q13285 461 aa9.39□□□□□ -0.91
CHAMP1-202ENST00000463003 TSC1Q92574 1164 aa9.39□□□□□ -0.91
CHAMP1-202ENST00000463003 KLF16Q9BXK1 252 aaPredicted RBP9.39□□□□□ -0.91
CHAMP1-202ENST00000463003 PER1O15534 1290 aaPredicted RBP9.38□□□□□ -0.91
CHAMP1-202ENST00000463003 HELBQ8NG08 1087 aaPredicted RBP9.38□□□□□ -0.91
CHAMP1-202ENST00000463003 PURBQ96QR8 312 aaKnown RBP9.38□□□□□ -0.91
CHAMP1-202ENST00000463003 LIMD1Q9UGP4 676 aa9.38□□□□□ -0.91
CHAMP1-202ENST00000463003 LILRB3O75022 631 aa9.37□□□□□ -0.91
CHAMP1-202ENST00000463003 NBPF14Q5TI25 921 aa9.37□□□□□ -0.91
CHAMP1-202ENST00000463003 GPBP1L1Q9HC44 474 aaPredicted RBP9.37□□□□□ -0.91
CHAMP1-202ENST00000463003 ZIC2O95409 532 aaPredicted RBP9.36□□□□□ -0.91
CHAMP1-202ENST00000463003 GMPRP36959 345 aa9.36□□□□□ -0.91
CHAMP1-202ENST00000463003 QPCTQ16769 361 aa9.36□□□□□ -0.91
CHAMP1-202ENST00000463003 C4orf48Q5BLP8 95 aa9.35□□□□□ -0.91
CHAMP1-202ENST00000463003 VEGFBP49765 207 aa9.34□□□□□ -0.91
CHAMP1-202ENST00000463003 RSPH6AQ9H0K4 717 aa9.34□□□□□ -0.91
CHAMP1-202ENST00000463003 UPP2O95045 317 aa9.33□□□□□ -0.92
CHAMP1-202ENST00000463003 NR3C2P08235 984 aa9.33□□□□□ -0.92
CHAMP1-202ENST00000463003 GRM5P41594 1212 aa9.33□□□□□ -0.92
CHAMP1-202ENST00000463003 CLK2P49760 499 aaKnown RBP9.33□□□□□ -0.92
CHAMP1-202ENST00000463003 ITPKCQ96DU7 683 aa9.33□□□□□ -0.92
CHAMP1-202ENST00000463003 C1QTNF2Q9BXJ5 285 aa9.33□□□□□ -0.92
CHAMP1-202ENST00000463003 KDM4CQ9H3R0 1056 aa9.33□□□□□ -0.92
CHAMP1-202ENST00000463003 ZFAND3Q9H8U3 227 aa9.33□□□□□ -0.92
CHAMP1-202ENST00000463003 MAP4K5Q9Y4K4 846 aa9.33□□□□□ -0.92
CHAMP1-202ENST00000463003 SH3RF1Q7Z6J0 888 aa9.32□□□□□ -0.92
CHAMP1-202ENST00000463003 ZSCAN1Q8NBB4 408 aa9.32□□□□□ -0.92
CHAMP1-202ENST00000463003 GPKOWQ92917 476 aaPredicted RBP eCLIP9.32□□□□□ -0.92
CHAMP1-202ENST00000463003 TRMT44Q8IYL2 757 aaKnown RBP9.31□□□□□ -0.92
CHAMP1-202ENST00000463003 ERBB4Q15303 1308 aa9.31□□□□□ -0.92
CHAMP1-202ENST00000463003 MAN1A2O60476 641 aa9.3□□□□□ -0.92
CHAMP1-202ENST00000463003 NEUROD2Q15784 382 aa9.3□□□□□ -0.92
CHAMP1-202ENST00000463003 RTL5Q5HYW3 569 aaPredicted RBP9.3□□□□□ -0.92
CHAMP1-202ENST00000463003 SH3BP5LQ7L8J4 393 aa9.3□□□□□ -0.92
CHAMP1-202ENST00000463003 FSHRP23945 695 aa9.29□□□□□ -0.92
CHAMP1-202ENST00000463003 C6orf118Q5T5N4 469 aa9.29□□□□□ -0.92
CHAMP1-202ENST00000463003 VASH1Q7L8A9 365 aaPredicted RBP9.29□□□□□ -0.92
CHAMP1-202ENST00000463003 LINC00528Q8N1L1 170 aa9.29□□□□□ -0.92
CHAMP1-202ENST00000463003 MEIOBQ8N635 442 aa9.29□□□□□ -0.92
CHAMP1-202ENST00000463003 MAGEB6P1A0A0J9YX57 407 aa9.28□□□□□ -0.92
CHAMP1-202ENST00000463003 SOBPA7XYQ1 873 aa9.28□□□□□ -0.92
CHAMP1-202ENST00000463003 VSIG8P0DPA2 414 aa9.28□□□□□ -0.92
CHAMP1-202ENST00000463003 BMP2P12643 396 aa9.28□□□□□ -0.92
CHAMP1-202ENST00000463003 BRPF1P55201 1214 aaPredicted RBP9.28□□□□□ -0.92
CHAMP1-202ENST00000463003 EMILIN1Q9Y6C2 1016 aa9.28□□□□□ -0.92
CHAMP1-202ENST00000463003 FAM117AQ9C073 453 aa9.27□□□□□ -0.93
CHAMP1-202ENST00000463003 LORP23490 312 aaPredicted RBP9.26□□□□□ -0.93
CHAMP1-202ENST00000463003 CCDC116Q8IYX3 515 aa9.26□□□□□ -0.93
CHAMP1-202ENST00000463003 TSEN34Q9BSV6 310 aaKnown RBP9.26□□□□□ -0.93
CHAMP1-202ENST00000463003 POLR3EQ9NVU0 708 aa9.26□□□□□ -0.93
CHAMP1-202ENST00000463003 CARD14Q9BXL6 1004 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms