RNA–Protein interactions for RNA: ENST00000462983.5

TRAPPC12-214, Transcript of trafficking protein particle complex 12, humanhuman

TSL 4

Gene TRAPPC12, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-214ENST00000462983 ARHGEF10O15013 1369 aa12.84□□□□□ -0.35
TRAPPC12-214ENST00000462983 SLC24A1O60721 1099 aa12.84□□□□□ -0.35
TRAPPC12-214ENST00000462983 HSPA5P11021 654 aaKnown RBP12.84□□□□□ -0.35
TRAPPC12-214ENST00000462983 EIF4G2P78344 907 aaKnown RBP eCLIP12.84□□□□□ -0.352e-9■■■□□ 17.1
TRAPPC12-214ENST00000462983 ATAD2Q6PL18 1390 aa12.83□□□□□ -0.36
TRAPPC12-214ENST00000462983 MON2Q7Z3U7 1717 aa12.83□□□□□ -0.36
TRAPPC12-214ENST00000462983 HAP1P54257 671 aaPredicted RBP12.83□□□□□ -0.36
TRAPPC12-214ENST00000462983 NUTM2GQ5VZR2 741 aa12.82□□□□□ -0.36
TRAPPC12-214ENST00000462983 TMC1Q8TDI8 760 aa12.82□□□□□ -0.36
TRAPPC12-214ENST00000462983 NGLY1Q96IV0 654 aa12.82□□□□□ -0.36
TRAPPC12-214ENST00000462983 AFF2P51816 1311 aa12.82□□□□□ -0.36
TRAPPC12-214ENST00000462983 PHRF1Q9P1Y6 1649 aaKnown RBP12.81□□□□□ -0.36
TRAPPC12-214ENST00000462983 POTEAQ6S8J7 498 aa12.81□□□□□ -0.36
TRAPPC12-214ENST00000462983 USP6P35125 1406 aa12.8□□□□□ -0.36
TRAPPC12-214ENST00000462983 PLCH1Q4KWH8 1693 aa12.8□□□□□ -0.36
TRAPPC12-214ENST00000462983 NRKQ7Z2Y5 1582 aa12.79□□□□□ -0.36
TRAPPC12-214ENST00000462983 TMF1P82094 1093 aa12.79□□□□□ -0.36
TRAPPC12-214ENST00000462983 ZNF772Q68DY9 489 aaPredicted RBP12.79□□□□□ -0.36
TRAPPC12-214ENST00000462983 ABTB2Q8N961 1025 aa12.79□□□□□ -0.36
TRAPPC12-214ENST00000462983 SLC12A5Q9H2X9 1139 aa12.79□□□□□ -0.36
TRAPPC12-214ENST00000462983 PIK3C2AO00443 1686 aa12.79□□□□□ -0.36
TRAPPC12-214ENST00000462983 KTN1Q86UP2 1357 aaKnown RBP12.78□□□□□ -0.36
TRAPPC12-214ENST00000462983 CPSF1Q10570 1443 aaKnown RBP12.78□□□□□ -0.36
TRAPPC12-214ENST00000462983 PUS7Q96PZ0 661 aaKnown RBP12.77□□□□□ -0.37
TRAPPC12-214ENST00000462983 ZNF692Q9BU19 519 aaPredicted RBP12.77□□□□□ -0.37
TRAPPC12-214ENST00000462983 USP21Q9UK80 565 aa12.77□□□□□ -0.37
TRAPPC12-214ENST00000462983 CD163L1Q9NR16 1453 aa12.77□□□□□ -0.37
TRAPPC12-214ENST00000462983 MYOM1P52179 1685 aa12.77□□□□□ -0.37
TRAPPC12-214ENST00000462983 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.76□□□□□ -0.37
TRAPPC12-214ENST00000462983 NWD2Q9ULI1 1742 aa12.76□□□□□ -0.37
TRAPPC12-214ENST00000462983 CDCA8Q53HL2 280 aa12.76□□□□□ -0.37
TRAPPC12-214ENST00000462983 BRD4O60885 1362 aaPredicted RBP12.76□□□□□ -0.37
TRAPPC12-214ENST00000462983 SSH2Q76I76 1423 aa12.76□□□□□ -0.37
TRAPPC12-214ENST00000462983 C11orf95C9JLR9 678 aaPredicted RBP12.75□□□□□ -0.37
TRAPPC12-214ENST00000462983 COL14A1Q05707 1796 aaKnown RBP12.75□□□□□ -0.37
TRAPPC12-214ENST00000462983 TTC21BQ7Z4L5 1316 aa12.75□□□□□ -0.37
TRAPPC12-214ENST00000462983 HDGFL2Q7Z4V5 671 aaPredicted RBP12.75□□□□□ -0.37
TRAPPC12-214ENST00000462983 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.75□□□□□ -0.37
TRAPPC12-214ENST00000462983 A0A1W2PP64 1363 aa12.74□□□□□ -0.37
TRAPPC12-214ENST00000462983 FAM83GA6ND36 823 aa12.74□□□□□ -0.37
TRAPPC12-214ENST00000462983 NLRP6P59044 892 aa12.74□□□□□ -0.37
TRAPPC12-214ENST00000462983 NLRP13Q86W25 1043 aa12.74□□□□□ -0.37
TRAPPC12-214ENST00000462983 FNBP4Q8N3X1 1017 aaPredicted RBP12.74□□□□□ -0.37
TRAPPC12-214ENST00000462983 POLR3GLQ9BT43 218 aa12.74□□□□□ -0.37
TRAPPC12-214ENST00000462983 QTRT2Q9H974 415 aaKnown RBP12.74□□□□□ -0.37
TRAPPC12-214ENST00000462983 TERF2IPQ9NYB0 399 aa12.74□□□□□ -0.37
TRAPPC12-214ENST00000462983 RGPD5Q99666 1765 aa12.74□□□□□ -0.37
TRAPPC12-214ENST00000462983 SLIT2O94813 1529 aa12.73□□□□□ -0.37
TRAPPC12-214ENST00000462983 BCL9LQ86UU0 1499 aa12.73□□□□□ -0.37
TRAPPC12-214ENST00000462983 NINLQ9Y2I6 1382 aa12.73□□□□□ -0.37
TRAPPC12-214ENST00000462983 ZC3H6P61129 1189 aaKnown RBP12.73□□□□□ -0.37
TRAPPC12-214ENST00000462983 NRAPQ86VF7 1730 aa12.73□□□□□ -0.37
TRAPPC12-214ENST00000462983 KIAA0232Q92628 1395 aa12.72□□□□□ -0.37
TRAPPC12-214ENST00000462983 CCDC7Q96M83 1385 aa12.72□□□□□ -0.37
TRAPPC12-214ENST00000462983 USP19O94966 1318 aa12.72□□□□□ -0.37
TRAPPC12-214ENST00000462983 TTC21AQ8NDW8 1320 aa12.72□□□□□ -0.37
TRAPPC12-214ENST00000462983 ZNF316A6NFI3 1004 aaPredicted RBP12.72□□□□□ -0.37
TRAPPC12-214ENST00000462983 RXRBP28702 533 aa12.72□□□□□ -0.37
TRAPPC12-214ENST00000462983 PRDM11Q9NQV5 511 aa12.72□□□□□ -0.37
TRAPPC12-214ENST00000462983 TRPC5Q9UL62 973 aaPredicted RBP12.72□□□□□ -0.37
TRAPPC12-214ENST00000462983 KIF20BQ96Q89 1820 aa12.72□□□□□ -0.37
TRAPPC12-214ENST00000462983 EDC4Q6P2E9 1401 aaKnown RBP12.71□□□□□ -0.37
TRAPPC12-214ENST00000462983 KIF7Q2M1P5 1343 aa12.71□□□□□ -0.37
TRAPPC12-214ENST00000462983 WASHC2AQ641Q2 1341 aa12.71□□□□□ -0.37
TRAPPC12-214ENST00000462983 CHRNA2Q15822 529 aa12.71□□□□□ -0.37
TRAPPC12-214ENST00000462983 NME9Q86XW9 330 aa12.71□□□□□ -0.37
TRAPPC12-214ENST00000462983 ZRANB1Q9UGI0 708 aa12.71□□□□□ -0.37
TRAPPC12-214ENST00000462983 LTN1O94822 1766 aa12.71□□□□□ -0.38
TRAPPC12-214ENST00000462983 ATRNO75882 1429 aa12.71□□□□□ -0.38
TRAPPC12-214ENST00000462983 USP54Q70EL1 1684 aa12.7□□□□□ -0.38
TRAPPC12-214ENST00000462983 ANKRD36BQ8N2N9 1353 aa12.7□□□□□ -0.38
TRAPPC12-214ENST00000462983 ZBTB7CA1YPR0 619 aa12.7□□□□□ -0.38
TRAPPC12-214ENST00000462983 SOX12O15370 315 aa12.7□□□□□ -0.38
TRAPPC12-214ENST00000462983 GCP02774 474 aa12.7□□□□□ -0.38
TRAPPC12-214ENST00000462983 UNC5CLQ8IV45 518 aa12.7□□□□□ -0.38
TRAPPC12-214ENST00000462983 BTG4Q9NY30 223 aa12.7□□□□□ -0.38
TRAPPC12-214ENST00000462983 SLIT3O75094 1523 aa12.7□□□□□ -0.38
TRAPPC12-214ENST00000462983 RBM6P78332 1123 aaKnown RBP12.69□□□□□ -0.38
TRAPPC12-214ENST00000462983 BRWD3Q6RI45 1802 aa12.68□□□□□ -0.38
TRAPPC12-214ENST00000462983 CCDC9Q9Y3X0 531 aaKnown RBP12.68□□□□□ -0.38
TRAPPC12-214ENST00000462983 GLI3P10071 1580 aa12.68□□□□□ -0.38
TRAPPC12-214ENST00000462983 LMO7Q8WWI1 1683 aa12.67□□□□□ -0.38
TRAPPC12-214ENST00000462983 COL18A1P39060 1754 aa12.67□□□□□ -0.38
TRAPPC12-214ENST00000462983 RGS12O14924 1447 aa12.66□□□□□ -0.38
TRAPPC12-214ENST00000462983 GJD4Q96KN9 370 aaPredicted RBP12.66□□□□□ -0.38
TRAPPC12-214ENST00000462983 STRN4Q9NRL3 753 aa12.66□□□□□ -0.38
TRAPPC12-214ENST00000462983 CAMTA1Q9Y6Y1 1673 aa12.66□□□□□ -0.38
TRAPPC12-214ENST00000462983 NFAT5O94916 1531 aa12.66□□□□□ -0.38
TRAPPC12-214ENST00000462983 CPDO75976 1380 aa12.66□□□□□ -0.38
TRAPPC12-214ENST00000462983 USP31Q70CQ4 1352 aa12.66□□□□□ -0.38
TRAPPC12-214ENST00000462983 VPS72Q15906 364 aa12.65□□□□□ -0.38
TRAPPC12-214ENST00000462983 KCNH5Q8NCM2 988 aa12.65□□□□□ -0.38
TRAPPC12-214ENST00000462983 CDK12Q9NYV4 1490 aaPredicted RBP12.65□□□□□ -0.38
TRAPPC12-214ENST00000462983 CARD14Q9BXL6 1004 aa12.64□□□□□ -0.39
TRAPPC12-214ENST00000462983 OVOS2A0A0J9YW53 1432 aa12.63□□□□□ -0.39
TRAPPC12-214ENST00000462983 OVOS2Q6IE36 1432 aa12.63□□□□□ -0.39
TRAPPC12-214ENST00000462983 NSD3Q9BZ95 1437 aa12.63□□□□□ -0.39
TRAPPC12-214ENST00000462983 MAP2P11137 1827 aaKnown RBP12.63□□□□□ -0.39
TRAPPC12-214ENST00000462983 EVA1CP58658 441 aa12.63□□□□□ -0.39
TRAPPC12-214ENST00000462983 COG3Q96JB2 828 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms