RNA–Protein interactions for RNA: ENST00000461869.5

SF3A3-203, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 3

Gene SF3A3, Length 776 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-203ENST00000461869 PRR36Q9H6K5 1346 aa22.43■■□□□ 1.18
SF3A3-203ENST00000461869 BAG6P46379 1132 aa22.43■■□□□ 1.18
SF3A3-203ENST00000461869 TRPM3Q9HCF6 1732 aaPredicted RBP22.42■■□□□ 1.18
SF3A3-203ENST00000461869 WASLO00401 505 aaPredicted RBP22.41■■□□□ 1.18
SF3A3-203ENST00000461869 NGDNQ8NEJ9 315 aaKnown RBP22.41■■□□□ 1.18
SF3A3-203ENST00000461869 NRAPQ86VF7 1730 aa22.4■■□□□ 1.18
SF3A3-203ENST00000461869 PAK3O75914 559 aaPredicted RBP22.4■■□□□ 1.18
SF3A3-203ENST00000461869 DCAF11Q8TEB1 546 aa22.4■■□□□ 1.18
SF3A3-203ENST00000461869 TULP4Q9NRJ4 1543 aa22.4■■□□□ 1.18
SF3A3-203ENST00000461869 COL14A1Q05707 1796 aaKnown RBP22.39■■□□□ 1.17
SF3A3-203ENST00000461869 ALS2Q96Q42 1657 aa22.39■■□□□ 1.17
SF3A3-203ENST00000461869 SPATA31A5Q5VU36 1347 aa22.37■■□□□ 1.17
SF3A3-203ENST00000461869 SPATA31A7Q8IWB4 1347 aa22.37■■□□□ 1.17
SF3A3-203ENST00000461869 PSDA5PKW4 1024 aaPredicted RBP22.37■■□□□ 1.17
SF3A3-203ENST00000461869 FAM182BQ5T319 152 aa22.36■■□□□ 1.17
SF3A3-203ENST00000461869 PRDM11Q9NQV5 511 aa22.36■■□□□ 1.17
SF3A3-203ENST00000461869 STAC3Q96MF2 364 aa22.35■■□□□ 1.17
SF3A3-203ENST00000461869 EN1Q05925 392 aaPredicted RBP22.34■■□□□ 1.17
SF3A3-203ENST00000461869 LRP5O75197 1615 aa22.33■■□□□ 1.17
SF3A3-203ENST00000461869 NUDT16Q96DE0 195 aaKnown RBP22.32■■□□□ 1.16
SF3A3-203ENST00000461869 CRYBG1Q9Y4K1 1723 aa22.29■■□□□ 1.16
SF3A3-203ENST00000461869 KIAA0232Q92628 1395 aa22.29■■□□□ 1.16
SF3A3-203ENST00000461869 CHRNA2Q15822 529 aa22.29■■□□□ 1.16
SF3A3-203ENST00000461869 SPATA31A1Q5TZJ5 1347 aa22.29■■□□□ 1.16
SF3A3-203ENST00000461869 RGPD1P0DJD0 1748 aa22.28■■□□□ 1.16
SF3A3-203ENST00000461869 STRN4Q9NRL3 753 aa22.28■■□□□ 1.16
SF3A3-203ENST00000461869 THSD7AQ9UPZ6 1657 aa22.27■■□□□ 1.16
SF3A3-203ENST00000461869 ZC3H6P61129 1189 aaKnown RBP22.27■■□□□ 1.16
SF3A3-203ENST00000461869 ATP7BP35670 1465 aa22.27■■□□□ 1.16
SF3A3-203ENST00000461869 R3HDM1Q15032 1099 aaKnown RBP22.26■■□□□ 1.15
SF3A3-203ENST00000461869 NUTM2GQ5VZR2 741 aa22.26■■□□□ 1.15
SF3A3-203ENST00000461869 CDK19Q9BWU1 502 aa22.26■■□□□ 1.15
SF3A3-203ENST00000461869 DISP2A7MBM2 1401 aa22.25■■□□□ 1.15
SF3A3-203ENST00000461869 EZH2Q15910 746 aaKnown RBP22.25■■□□□ 1.15
SF3A3-203ENST00000461869 FAM196AQ6ZSG2 479 aa22.25■■□□□ 1.15
SF3A3-203ENST00000461869 ITSN1Q15811 1721 aa22.24■■□□□ 1.15
SF3A3-203ENST00000461869 ARHGEF28Q8N1W1 1705 aaKnown RBP22.24■■□□□ 1.15
SF3A3-203ENST00000461869 TRIM37O94972 964 aa22.24■■□□□ 1.15
SF3A3-203ENST00000461869 EVA1CP58658 441 aa22.23■■□□□ 1.15
SF3A3-203ENST00000461869 USP35Q9P2H5 1018 aa22.23■■□□□ 1.15
SF3A3-203ENST00000461869 ACEP12821 1306 aa22.23■■□□□ 1.15
SF3A3-203ENST00000461869 NBPF8Q3BBV2 869 aa22.22■■□□□ 1.15
SF3A3-203ENST00000461869 CCDC61Q9Y6R9 512 aa22.22■■□□□ 1.15
SF3A3-203ENST00000461869 CAMKK2Q96RR4 588 aa22.21■■□□□ 1.15
SF3A3-203ENST00000461869 POLR3AO14802 1390 aaPredicted RBP22.21■■□□□ 1.15
SF3A3-203ENST00000461869 PHRF1Q9P1Y6 1649 aaKnown RBP22.2■■□□□ 1.15
SF3A3-203ENST00000461869 TNS1Q9HBL0 1735 aaKnown RBP22.2■■□□□ 1.14
SF3A3-203ENST00000461869 APBA3O96018 575 aa22.2■■□□□ 1.14
SF3A3-203ENST00000461869 PLEKHG3A1L390 1219 aa22.19■■□□□ 1.14
SF3A3-203ENST00000461869 PDE3BQ13370 1112 aa22.19■■□□□ 1.14
SF3A3-203ENST00000461869 ABTB2Q8N961 1025 aa22.19■■□□□ 1.14
SF3A3-203ENST00000461869 BARGINQ6ZT62 677 aa22.18■■□□□ 1.14
SF3A3-203ENST00000461869 SSH2Q76I76 1423 aa22.17■■□□□ 1.14
SF3A3-203ENST00000461869 LARP1Q6PKG0 1096 aaKnown RBP22.16■■□□□ 1.14
SF3A3-203ENST00000461869 PARD3Q8TEW0 1356 aa22.14■■□□□ 1.14
SF3A3-203ENST00000461869 TOPAZ1Q8N9V7 1692 aa22.14■■□□□ 1.14
SF3A3-203ENST00000461869 TCP11L2Q8N4U5 519 aa22.14■■□□□ 1.13
SF3A3-203ENST00000461869 TIMELESSQ9UNS1 1208 aa22.14■■□□□ 1.13
SF3A3-203ENST00000461869 CAMTA1Q9Y6Y1 1673 aa22.14■■□□□ 1.13
SF3A3-203ENST00000461869 CPDO75976 1380 aa22.13■■□□□ 1.13
SF3A3-203ENST00000461869 NRKQ7Z2Y5 1582 aa22.12■■□□□ 1.13
SF3A3-203ENST00000461869 USP19O94966 1318 aa22.12■■□□□ 1.13
SF3A3-203ENST00000461869 SRPK2P78362 688 aaKnown RBP22.12■■□□□ 1.13
SF3A3-203ENST00000461869 NBPF1Q3BBV0 1214 aa22.12■■□□□ 1.13
SF3A3-203ENST00000461869 NLRP13Q86W25 1043 aa22.12■■□□□ 1.13
SF3A3-203ENST00000461869 GCP02774 474 aa22.11■■□□□ 1.13
SF3A3-203ENST00000461869 THRAP3Q9Y2W1 955 aaKnown RBP22.11■■□□□ 1.13
SF3A3-203ENST00000461869 NBPF14Q5TI25 921 aa22.09■■□□□ 1.13
SF3A3-203ENST00000461869 KIAA1210Q9ULL0 1709 aa22.09■■□□□ 1.13
SF3A3-203ENST00000461869 LMO7Q8WWI1 1683 aa22.08■■□□□ 1.13
SF3A3-203ENST00000461869 PPIP5K1Q6PFW1 1433 aa22.08■■□□□ 1.13
SF3A3-203ENST00000461869 CABP2Q9NPB3 220 aa22.08■■□□□ 1.13
SF3A3-203ENST00000461869 SIN3AQ96ST3 1273 aa22.07■■□□□ 1.12
SF3A3-203ENST00000461869 TONSLQ96HA7 1378 aa22.07■■□□□ 1.12
SF3A3-203ENST00000461869 CENPJQ9HC77 1338 aaPredicted RBP22.06■■□□□ 1.12
SF3A3-203ENST00000461869 NEUROD1Q13562 356 aa22.06■■□□□ 1.12
SF3A3-203ENST00000461869 COL5A2P05997 1499 aaPredicted RBP22.05■■□□□ 1.12
SF3A3-203ENST00000461869 ZBTB7CA1YPR0 619 aa22.05■■□□□ 1.12
SF3A3-203ENST00000461869 RREB1Q92766 1687 aa22.04■■□□□ 1.12
SF3A3-203ENST00000461869 BRD4O60885 1362 aaPredicted RBP22.03■■□□□ 1.12
SF3A3-203ENST00000461869 C11orf95C9JLR9 678 aaPredicted RBP22.03■■□□□ 1.12
SF3A3-203ENST00000461869 NLRP6P59044 892 aa22.02■■□□□ 1.12
SF3A3-203ENST00000461869 CABP1Q9NZU7 370 aa22.02■■□□□ 1.12
SF3A3-203ENST00000461869 CRB1P82279 1406 aa22.02■■□□□ 1.12
SF3A3-203ENST00000461869 NUP188Q5SRE5 1749 aa22.02■■□□□ 1.12
SF3A3-203ENST00000461869 PARP4Q9UKK3 1724 aaKnown RBP22■■□□□ 1.11
SF3A3-203ENST00000461869 USP6P35125 1406 aa21.99■■□□□ 1.11
SF3A3-203ENST00000461869 AATKQ6ZMQ8 1374 aa21.99■■□□□ 1.11
SF3A3-203ENST00000461869 TOM1L2Q6ZVM7 507 aa21.98■■□□□ 1.11
SF3A3-203ENST00000461869 SPON1Q9HCB6 807 aa21.98■■□□□ 1.11
SF3A3-203ENST00000461869 OVOS2A0A0G2JMS6 1433 aa21.97■■□□□ 1.11
SF3A3-203ENST00000461869 OVOS2A0A0J9YW53 1432 aa21.97■■□□□ 1.11
SF3A3-203ENST00000461869 OVOS2Q6IE36 1432 aa21.97■■□□□ 1.11
SF3A3-203ENST00000461869 DDB1Q16531 1140 aa21.97■■□□□ 1.11
SF3A3-203ENST00000461869 PPP1R1BQ9UD71 204 aaPredicted RBP21.97■■□□□ 1.11
SF3A3-203ENST00000461869 SLIT3O75094 1523 aa21.96■■□□□ 1.11
SF3A3-203ENST00000461869 QRICH2Q9H0J4 1663 aa21.95■■□□□ 1.1
SF3A3-203ENST00000461869 KCNQ2O43526 872 aa21.95■■□□□ 1.1
SF3A3-203ENST00000461869 PLSCR1O15162 318 aa21.94■■□□□ 1.1
SF3A3-203ENST00000461869 EVC2Q86UK5 1308 aa21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms