RNA–Protein interactions for RNA: ENST00000461768.5

SRRM1-204, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 3

Gene SRRM1, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-204ENST00000461768 ZNF692Q9BU19 519 aaPredicted RBP11.77□□□□□ -0.53
SRRM1-204ENST00000461768 SPATA31A6Q5VVP1 1343 aa11.77□□□□□ -0.53
SRRM1-204ENST00000461768 ARHGEF10O15013 1369 aa11.77□□□□□ -0.53
SRRM1-204ENST00000461768 C11orf95C9JLR9 678 aaPredicted RBP11.76□□□□□ -0.53
SRRM1-204ENST00000461768 A0A1W2PP64 1363 aa11.76□□□□□ -0.53
SRRM1-204ENST00000461768 TERF2IPQ9NYB0 399 aa11.75□□□□□ -0.53
SRRM1-204ENST00000461768 KTN1Q86UP2 1357 aaKnown RBP11.75□□□□□ -0.53
SRRM1-204ENST00000461768 ANKRD36BQ8N2N9 1353 aa11.75□□□□□ -0.53
SRRM1-204ENST00000461768 MED1Q15648 1581 aaPredicted RBP11.75□□□□□ -0.53
SRRM1-204ENST00000461768 LRP6O75581 1613 aa11.75□□□□□ -0.53
SRRM1-204ENST00000461768 PAK3O75914 559 aaPredicted RBP11.74□□□□□ -0.53
SRRM1-204ENST00000461768 HDGFL2Q7Z4V5 671 aaPredicted RBP11.74□□□□□ -0.53
SRRM1-204ENST00000461768 ABCA3Q99758 1704 aa11.74□□□□□ -0.53
SRRM1-204ENST00000461768 CRYBG1Q9Y4K1 1723 aa11.74□□□□□ -0.53
SRRM1-204ENST00000461768 PIK3C2AO00443 1686 aa11.73□□□□□ -0.53
SRRM1-204ENST00000461768 KIF7Q2M1P5 1343 aa11.73□□□□□ -0.53
SRRM1-204ENST00000461768 EDC4Q6P2E9 1401 aaKnown RBP11.73□□□□□ -0.53
SRRM1-204ENST00000461768 LMOD2Q6P5Q4 547 aa11.73□□□□□ -0.53
SRRM1-204ENST00000461768 TTC21BQ7Z4L5 1316 aa11.73□□□□□ -0.53
SRRM1-204ENST00000461768 TTC21AQ8NDW8 1320 aa11.72□□□□□ -0.53
SRRM1-204ENST00000461768 POLR3GLQ9BT43 218 aa11.72□□□□□ -0.53
SRRM1-204ENST00000461768 CCDC7Q96M83 1385 aa11.71□□□□□ -0.53
SRRM1-204ENST00000461768 NUTM2BA6NNL0 878 aaPredicted RBP11.71□□□□□ -0.53
SRRM1-204ENST00000461768 NUTM2EB1AL46 878 aaPredicted RBP11.71□□□□□ -0.53
SRRM1-204ENST00000461768 NUTM2AQ8IVF1 878 aaPredicted RBP11.71□□□□□ -0.53
SRRM1-204ENST00000461768 ABTB2Q8N961 1025 aa11.71□□□□□ -0.53
SRRM1-204ENST00000461768 WASHC2AQ641Q2 1341 aa11.7□□□□□ -0.54
SRRM1-204ENST00000461768 MARF1Q9Y4F3 1742 aaKnown RBP11.7□□□□□ -0.54
SRRM1-204ENST00000461768 NUTM2GQ5VZR2 741 aa11.7□□□□□ -0.54
SRRM1-204ENST00000461768 CABLES1Q8TDN4 633 aa11.7□□□□□ -0.54
SRRM1-204ENST00000461768 USP54Q70EL1 1684 aa11.7□□□□□ -0.54
SRRM1-204ENST00000461768 PHRF1Q9P1Y6 1649 aaKnown RBP11.7□□□□□ -0.54
SRRM1-204ENST00000461768 USP19O94966 1318 aa11.69□□□□□ -0.54
SRRM1-204ENST00000461768 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.69□□□□□ -0.54
SRRM1-204ENST00000461768 USP31Q70CQ4 1352 aa11.68□□□□□ -0.54
SRRM1-204ENST00000461768 NLRP13Q86W25 1043 aa11.68□□□□□ -0.54
SRRM1-204ENST00000461768 CARD14Q9BXL6 1004 aa11.68□□□□□ -0.54
SRRM1-204ENST00000461768 SLIT3O75094 1523 aa11.68□□□□□ -0.54
SRRM1-204ENST00000461768 PLEKHG5O94827 1062 aa11.67□□□□□ -0.54
SRRM1-204ENST00000461768 ADAMTS2O95450 1211 aa11.67□□□□□ -0.54
SRRM1-204ENST00000461768 NLRP6P59044 892 aa11.67□□□□□ -0.54
SRRM1-204ENST00000461768 MEX3CQ5U5Q3 659 aaKnown RBP11.67□□□□□ -0.54
SRRM1-204ENST00000461768 NME9Q86XW9 330 aa11.67□□□□□ -0.54
SRRM1-204ENST00000461768 NSD3Q9BZ95 1437 aa11.67□□□□□ -0.54
SRRM1-204ENST00000461768 KIF20BQ96Q89 1820 aa11.66□□□□□ -0.54
SRRM1-204ENST00000461768 HAP1P54257 671 aaPredicted RBP11.66□□□□□ -0.54
SRRM1-204ENST00000461768 PANK3Q9H999 370 aa11.66□□□□□ -0.54
SRRM1-204ENST00000461768 OVOS2A0A0J9YW53 1432 aa11.66□□□□□ -0.54
SRRM1-204ENST00000461768 OVOS2Q6IE36 1432 aa11.66□□□□□ -0.54
SRRM1-204ENST00000461768 C8orf37Q96NL8 207 aa11.65□□□□□ -0.54
SRRM1-204ENST00000461768 ZRANB1Q9UGI0 708 aa11.65□□□□□ -0.54
SRRM1-204ENST00000461768 FYB1O15117 783 aa11.64□□□□□ -0.55
SRRM1-204ENST00000461768 GCP02774 474 aa11.64□□□□□ -0.55
SRRM1-204ENST00000461768 NFAT5O94916 1531 aa11.64□□□□□ -0.55
SRRM1-204ENST00000461768 CPDO75976 1380 aa11.64□□□□□ -0.55
SRRM1-204ENST00000461768 COL14A1Q05707 1796 aaKnown RBP11.64□□□□□ -0.55
SRRM1-204ENST00000461768 FNBP4Q8N3X1 1017 aaPredicted RBP11.63□□□□□ -0.55
SRRM1-204ENST00000461768 KCNH5Q8NCM2 988 aa11.63□□□□□ -0.55
SRRM1-204ENST00000461768 NGLY1Q96IV0 654 aa11.63□□□□□ -0.55
SRRM1-204ENST00000461768 RGS17Q9UGC6 210 aaPredicted RBP11.63□□□□□ -0.55
SRRM1-204ENST00000461768 SLIT2O94813 1529 aa11.63□□□□□ -0.55
SRRM1-204ENST00000461768 KIAA0232Q92628 1395 aa11.63□□□□□ -0.55
SRRM1-204ENST00000461768 AFF2P51816 1311 aa11.62□□□□□ -0.55
SRRM1-204ENST00000461768 CGNL1Q0VF96 1302 aa11.62□□□□□ -0.55
SRRM1-204ENST00000461768 PLCH1Q4KWH8 1693 aa11.62□□□□□ -0.55
SRRM1-204ENST00000461768 FAM83GA6ND36 823 aa11.62□□□□□ -0.55
SRRM1-204ENST00000461768 ZC3H6P61129 1189 aaKnown RBP11.62□□□□□ -0.55
SRRM1-204ENST00000461768 COG3Q96JB2 828 aa11.62□□□□□ -0.55
SRRM1-204ENST00000461768 NWD2Q9ULI1 1742 aa11.62□□□□□ -0.55
SRRM1-204ENST00000461768 ANKRD26Q9UPS8 1709 aa11.61□□□□□ -0.55
SRRM1-204ENST00000461768 PER1O15534 1290 aaPredicted RBP11.61□□□□□ -0.55
SRRM1-204ENST00000461768 GGNBP2Q9H3C7 697 aa11.61□□□□□ -0.55
SRRM1-204ENST00000461768 PRDM11Q9NQV5 511 aa11.61□□□□□ -0.55
SRRM1-204ENST00000461768 BCL9LQ86UU0 1499 aa11.61□□□□□ -0.55
SRRM1-204ENST00000461768 LMO7Q8WWI1 1683 aa11.61□□□□□ -0.55
SRRM1-204ENST00000461768 NRAPQ86VF7 1730 aa11.6□□□□□ -0.55
SRRM1-204ENST00000461768 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.6□□□□□ -0.55
SRRM1-204ENST00000461768 ZNF772Q68DY9 489 aaPredicted RBP11.6□□□□□ -0.55
SRRM1-204ENST00000461768 KNSTRNQ9Y448 316 aa11.6□□□□□ -0.55
SRRM1-204ENST00000461768 COL18A1P39060 1754 aa11.59□□□□□ -0.55
SRRM1-204ENST00000461768 NSD2O96028 1365 aa11.59□□□□□ -0.55
SRRM1-204ENST00000461768 SOX12O15370 315 aa11.59□□□□□ -0.55
SRRM1-204ENST00000461768 CHRNA2Q15822 529 aa11.59□□□□□ -0.55
SRRM1-204ENST00000461768 ARHGEF25Q86VW2 580 aa11.59□□□□□ -0.55
SRRM1-204ENST00000461768 USP21Q9UK80 565 aa11.59□□□□□ -0.55
SRRM1-204ENST00000461768 ABCC6O95255 1503 aa11.59□□□□□ -0.55
SRRM1-204ENST00000461768 LTN1O94822 1766 aa11.59□□□□□ -0.55
SRRM1-204ENST00000461768 AATKQ6ZMQ8 1374 aa11.58□□□□□ -0.56
SRRM1-204ENST00000461768 AMER1Q5JTC6 1135 aaPredicted RBP11.58□□□□□ -0.56
SRRM1-204ENST00000461768 UNC5CLQ8IV45 518 aa11.58□□□□□ -0.56
SRRM1-204ENST00000461768 BTG4Q9NY30 223 aa11.58□□□□□ -0.56
SRRM1-204ENST00000461768 CAMTA1Q9Y6Y1 1673 aa11.58□□□□□ -0.56
SRRM1-204ENST00000461768 POTEAQ6S8J7 498 aa11.57□□□□□ -0.56
SRRM1-204ENST00000461768 ATRNO75882 1429 aa11.57□□□□□ -0.56
SRRM1-204ENST00000461768 NPC1L1Q9UHC9 1359 aa11.56□□□□□ -0.56
SRRM1-204ENST00000461768 ZBTB7CA1YPR0 619 aa11.56□□□□□ -0.56
SRRM1-204ENST00000461768 COL5A2P05997 1499 aaPredicted RBP11.56□□□□□ -0.56
SRRM1-204ENST00000461768 FBLN1P23142 703 aa11.55□□□□□ -0.56
SRRM1-204ENST00000461768 QTRT2Q9H974 415 aaKnown RBP11.55□□□□□ -0.56
SRRM1-204ENST00000461768 TRPC5Q9UL62 973 aaPredicted RBP11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms