RNA–Protein interactions for RNA: ENST00000461217.1

COL16A1-206, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 3

Gene COL16A1, Length 852 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-206ENST00000461217 KIAA1210Q9ULL0 1709 aa21.91■■□□□ 1.1
COL16A1-206ENST00000461217 NRAPQ86VF7 1730 aa21.9■■□□□ 1.1
COL16A1-206ENST00000461217 BTG4Q9NY30 223 aa21.9■■□□□ 1.1
COL16A1-206ENST00000461217 ZRANB1Q9UGI0 708 aa21.9■■□□□ 1.1
COL16A1-206ENST00000461217 BLMP54132 1417 aaPredicted RBP21.89■■□□□ 1.1
COL16A1-206ENST00000461217 CDK19Q9BWU1 502 aa21.88■■□□□ 1.09
COL16A1-206ENST00000461217 CRYBG1Q9Y4K1 1723 aa21.87■■□□□ 1.09
COL16A1-206ENST00000461217 SF3B2Q13435 895 aaKnown RBP21.87■■□□□ 1.09
COL16A1-206ENST00000461217 KRT27Q7Z3Y8 459 aa21.86■■□□□ 1.09
COL16A1-206ENST00000461217 PRDM11Q9NQV5 511 aa21.86■■□□□ 1.09
COL16A1-206ENST00000461217 TOPAZ1Q8N9V7 1692 aa21.85■■□□□ 1.09
COL16A1-206ENST00000461217 ONECUT3O60422 494 aaPredicted RBP21.84■■□□□ 1.09
COL16A1-206ENST00000461217 FAM98CQ17RN3 349 aaKnown RBP21.84■■□□□ 1.09
COL16A1-206ENST00000461217 NBPF1Q3BBV0 1214 aa21.84■■□□□ 1.09
COL16A1-206ENST00000461217 PHRF1Q9P1Y6 1649 aaKnown RBP21.82■■□□□ 1.08
COL16A1-206ENST00000461217 CCDC61Q9Y6R9 512 aa21.82■■□□□ 1.08
COL16A1-206ENST00000461217 ACEP12821 1306 aa21.81■■□□□ 1.08
COL16A1-206ENST00000461217 NUTM2GQ5VZR2 741 aa21.81■■□□□ 1.08
COL16A1-206ENST00000461217 EP400Q96L91 3159 aa21.8■■□□□ 1.08
COL16A1-206ENST00000461217 POLR3AO14802 1390 aaPredicted RBP21.8■■□□□ 1.08
COL16A1-206ENST00000461217 KIAA0232Q92628 1395 aa21.8■■□□□ 1.08
COL16A1-206ENST00000461217 SRPK2P78362 688 aaKnown RBP21.8■■□□□ 1.08
COL16A1-206ENST00000461217 DEFB132Q7Z7B7 95 aa21.8■■□□□ 1.08
COL16A1-206ENST00000461217 CENPJQ9HC77 1338 aaPredicted RBP21.8■■□□□ 1.08
COL16A1-206ENST00000461217 NBPF8Q3BBV2 869 aa21.78■■□□□ 1.08
COL16A1-206ENST00000461217 SPATA31A5Q5VU36 1347 aa21.78■■□□□ 1.08
COL16A1-206ENST00000461217 SPATA31A7Q8IWB4 1347 aa21.78■■□□□ 1.08
COL16A1-206ENST00000461217 QRICH2Q9H0J4 1663 aa21.77■■□□□ 1.08
COL16A1-206ENST00000461217 ZC3H6P61129 1189 aaKnown RBP21.77■■□□□ 1.08
COL16A1-206ENST00000461217 CHRNA2Q15822 529 aa21.77■■□□□ 1.08
COL16A1-206ENST00000461217 PCGF6Q9BYE7 350 aa21.77■■□□□ 1.08
COL16A1-206ENST00000461217 PLEKHG3A1L390 1219 aa21.76■■□□□ 1.07
COL16A1-206ENST00000461217 PPIP5K1Q6PFW1 1433 aa21.76■■□□□ 1.07
COL16A1-206ENST00000461217 STRN4Q9NRL3 753 aa21.76■■□□□ 1.07
COL16A1-206ENST00000461217 ABTB2Q8N961 1025 aa21.75■■□□□ 1.07
COL16A1-206ENST00000461217 CABP2Q9NPB3 220 aa21.74■■□□□ 1.07
COL16A1-206ENST00000461217 NRKQ7Z2Y5 1582 aa21.74■■□□□ 1.07
COL16A1-206ENST00000461217 THSD7AQ9UPZ6 1657 aa21.73■■□□□ 1.07
COL16A1-206ENST00000461217 BAG6P46379 1132 aa21.73■■□□□ 1.07
COL16A1-206ENST00000461217 L3MBTL2Q969R5 705 aa21.73■■□□□ 1.07
COL16A1-206ENST00000461217 FAM182BQ5T319 152 aa21.72■■□□□ 1.07
COL16A1-206ENST00000461217 SPATA31A1Q5TZJ5 1347 aa21.71■■□□□ 1.07
COL16A1-206ENST00000461217 RGPD1P0DJD0 1748 aa21.7■■□□□ 1.06
COL16A1-206ENST00000461217 EVA1CP58658 441 aa21.7■■□□□ 1.06
COL16A1-206ENST00000461217 SIN3AQ96ST3 1273 aa21.7■■□□□ 1.06
COL16A1-206ENST00000461217 USP35Q9P2H5 1018 aa21.7■■□□□ 1.06
COL16A1-206ENST00000461217 NEUROD1Q13562 356 aa21.69■■□□□ 1.06
COL16A1-206ENST00000461217 NLRP13Q86W25 1043 aa21.69■■□□□ 1.06
COL16A1-206ENST00000461217 TRPM1Q7Z4N2 1603 aa21.69■■□□□ 1.06
COL16A1-206ENST00000461217 SSH2Q76I76 1423 aa21.67■■□□□ 1.06
COL16A1-206ENST00000461217 USP19O94966 1318 aa21.67■■□□□ 1.06
COL16A1-206ENST00000461217 ROCK2O75116 1388 aaKnown RBP21.66■■□□□ 1.06
COL16A1-206ENST00000461217 BRD4O60885 1362 aaPredicted RBP21.65■■□□□ 1.06
COL16A1-206ENST00000461217 CPDO75976 1380 aa21.65■■□□□ 1.06
COL16A1-206ENST00000461217 EVC2Q86UK5 1308 aa21.65■■□□□ 1.06
COL16A1-206ENST00000461217 ZBTB7CA1YPR0 619 aa21.65■■□□□ 1.06
COL16A1-206ENST00000461217 CABP1Q9NZU7 370 aa21.65■■□□□ 1.06
COL16A1-206ENST00000461217 CAMTA1Q9Y6Y1 1673 aa21.65■■□□□ 1.06
COL16A1-206ENST00000461217 USP6P35125 1406 aa21.64■■□□□ 1.06
COL16A1-206ENST00000461217 LMO7Q8WWI1 1683 aa21.64■■□□□ 1.05
COL16A1-206ENST00000461217 GCP02774 474 aa21.63■■□□□ 1.05
COL16A1-206ENST00000461217 EN1Q05925 392 aaPredicted RBP21.63■■□□□ 1.05
COL16A1-206ENST00000461217 LARP1Q6PKG0 1096 aaKnown RBP21.62■■□□□ 1.05
COL16A1-206ENST00000461217 TNS1Q9HBL0 1735 aaKnown RBP21.62■■□□□ 1.05
COL16A1-206ENST00000461217 PSDA5PKW4 1024 aaPredicted RBP21.61■■□□□ 1.05
COL16A1-206ENST00000461217 NLRP6P59044 892 aa21.61■■□□□ 1.05
COL16A1-206ENST00000461217 FAM196AQ6ZSG2 479 aa21.61■■□□□ 1.05
COL16A1-206ENST00000461217 PDE3BQ13370 1112 aa21.6■■□□□ 1.05
COL16A1-206ENST00000461217 BARGINQ6ZT62 677 aa21.6■■□□□ 1.05
COL16A1-206ENST00000461217 TCP11L2Q8N4U5 519 aa21.6■■□□□ 1.05
COL16A1-206ENST00000461217 TRIM37O94972 964 aa21.59■■□□□ 1.05
COL16A1-206ENST00000461217 COL5A2P05997 1499 aaPredicted RBP21.58■■□□□ 1.05
COL16A1-206ENST00000461217 PIK3C2AO00443 1686 aa21.57■■□□□ 1.04
COL16A1-206ENST00000461217 DISP2A7MBM2 1401 aa21.57■■□□□ 1.04
COL16A1-206ENST00000461217 SLIT3O75094 1523 aa21.57■■□□□ 1.04
COL16A1-206ENST00000461217 LRP5O75197 1615 aa21.55■■□□□ 1.04
COL16A1-206ENST00000461217 EZH2Q15910 746 aaKnown RBP21.55■■□□□ 1.04
COL16A1-206ENST00000461217 THRAP3Q9Y2W1 955 aaKnown RBP21.55■■□□□ 1.04
COL16A1-206ENST00000461217 CRB1P82279 1406 aa21.55■■□□□ 1.04
COL16A1-206ENST00000461217 AATKQ6ZMQ8 1374 aa21.53■■□□□ 1.04
COL16A1-206ENST00000461217 APBA3O96018 575 aa21.53■■□□□ 1.04
COL16A1-206ENST00000461217 AKAP12Q02952 1782 aa21.53■■□□□ 1.04
COL16A1-206ENST00000461217 R3HDM1Q15032 1099 aaKnown RBP21.52■■□□□ 1.04
COL16A1-206ENST00000461217 ZNF692Q9BU19 519 aaPredicted RBP21.52■■□□□ 1.04
COL16A1-206ENST00000461217 TTC21BQ7Z4L5 1316 aa21.52■■□□□ 1.03
COL16A1-206ENST00000461217 PARP4Q9UKK3 1724 aaKnown RBP21.52■■□□□ 1.03
COL16A1-206ENST00000461217 SOX12O15370 315 aa21.51■■□□□ 1.03
COL16A1-206ENST00000461217 TOM1L2Q6ZVM7 507 aa21.51■■□□□ 1.03
COL16A1-206ENST00000461217 KTN1Q86UP2 1357 aaKnown RBP21.49■■□□□ 1.03
COL16A1-206ENST00000461217 PARD3Q8TEW0 1356 aa21.49■■□□□ 1.03
COL16A1-206ENST00000461217 CPSF1Q10570 1443 aaKnown RBP21.49■■□□□ 1.03
COL16A1-206ENST00000461217 KCNH5Q8NCM2 988 aa21.49■■□□□ 1.03
COL16A1-206ENST00000461217 CAMKK2Q96RR4 588 aa21.49■■□□□ 1.03
COL16A1-206ENST00000461217 CARD11Q9BXL7 1154 aa21.49■■□□□ 1.03
COL16A1-206ENST00000461217 TTC21AQ8NDW8 1320 aa21.49■■□□□ 1.03
COL16A1-206ENST00000461217 TONSLQ96HA7 1378 aa21.48■■□□□ 1.03
COL16A1-206ENST00000461217 LRRC37A3O60309 1634 aa21.47■■□□□ 1.03
COL16A1-206ENST00000461217 SRCAPQ6ZRS2 3230 aa21.46■■□□□ 1.03
COL16A1-206ENST00000461217 COL18A1P39060 1754 aa21.46■■□□□ 1.03
COL16A1-206ENST00000461217 WDR17Q8IZU2 1322 aa21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms