RNA–Protein interactions for RNA: ENST00000461009.1

RAB11FIP3-207, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 514 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-207ENST00000461009 ATP7BP35670 1465 aa18.77■□□□□ 0.6
RAB11FIP3-207ENST00000461009 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.77■□□□□ 0.6
RAB11FIP3-207ENST00000461009 FAM83GA6ND36 823 aa18.76■□□□□ 0.59
RAB11FIP3-207ENST00000461009 VPS72Q15906 364 aa18.76■□□□□ 0.59
RAB11FIP3-207ENST00000461009 ACEP12821 1306 aa18.75■□□□□ 0.59
RAB11FIP3-207ENST00000461009 TRPM3Q9HCF6 1732 aaPredicted RBP18.75■□□□□ 0.59
RAB11FIP3-207ENST00000461009 PLEKHG3A1L390 1219 aa18.75■□□□□ 0.59
RAB11FIP3-207ENST00000461009 CARD11Q9BXL7 1154 aa18.75■□□□□ 0.59
RAB11FIP3-207ENST00000461009 RALGAPBQ86X10 1494 aa18.73■□□□□ 0.59
RAB11FIP3-207ENST00000461009 CCDC125Q86Z20 511 aa18.73■□□□□ 0.59
RAB11FIP3-207ENST00000461009 BTG4Q9NY30 223 aa18.73■□□□□ 0.59
RAB11FIP3-207ENST00000461009 NWD2Q9ULI1 1742 aa18.73■□□□□ 0.59
RAB11FIP3-207ENST00000461009 EVC2Q86UK5 1308 aa18.73■□□□□ 0.59
RAB11FIP3-207ENST00000461009 ALS2Q96Q42 1657 aa18.73■□□□□ 0.59
RAB11FIP3-207ENST00000461009 POLR3AO14802 1390 aaPredicted RBP18.72■□□□□ 0.59
RAB11FIP3-207ENST00000461009 CABP2Q9NPB3 220 aa18.72■□□□□ 0.59
RAB11FIP3-207ENST00000461009 PRDM11Q9NQV5 511 aa18.72■□□□□ 0.59
RAB11FIP3-207ENST00000461009 ABCA3Q99758 1704 aa18.71■□□□□ 0.59
RAB11FIP3-207ENST00000461009 ABTB2Q8N961 1025 aa18.71■□□□□ 0.59
RAB11FIP3-207ENST00000461009 A0A0G2JS52 829 aa18.7■□□□□ 0.58
RAB11FIP3-207ENST00000461009 MYT1Q01538 1121 aa18.7■□□□□ 0.58
RAB11FIP3-207ENST00000461009 PPIP5K1Q6PFW1 1433 aa18.7■□□□□ 0.58
RAB11FIP3-207ENST00000461009 PLCH1Q4KWH8 1693 aa18.69■□□□□ 0.58
RAB11FIP3-207ENST00000461009 SEPT12Q8IYM1 358 aa18.69■□□□□ 0.58
RAB11FIP3-207ENST00000461009 QRICH2Q9H0J4 1663 aa18.69■□□□□ 0.58
RAB11FIP3-207ENST00000461009 COL14A1Q05707 1796 aaKnown RBP18.68■□□□□ 0.58
RAB11FIP3-207ENST00000461009 NUTM2GQ5VZR2 741 aa18.68■□□□□ 0.58
RAB11FIP3-207ENST00000461009 BRD4O60885 1362 aaPredicted RBP18.68■□□□□ 0.58
RAB11FIP3-207ENST00000461009 TOPAZ1Q8N9V7 1692 aa18.67■□□□□ 0.58
RAB11FIP3-207ENST00000461009 ONECUT3O60422 494 aaPredicted RBP18.67■□□□□ 0.58
RAB11FIP3-207ENST00000461009 NLRP13Q86W25 1043 aa18.67■□□□□ 0.58
RAB11FIP3-207ENST00000461009 CABP1Q9NZU7 370 aa18.67■□□□□ 0.58
RAB11FIP3-207ENST00000461009 GLI3P10071 1580 aa18.67■□□□□ 0.58
RAB11FIP3-207ENST00000461009 SF3B2Q13435 895 aaKnown RBP18.66■□□□□ 0.58
RAB11FIP3-207ENST00000461009 EVA1CP58658 441 aa18.65■□□□□ 0.58
RAB11FIP3-207ENST00000461009 ZC3H6P61129 1189 aaKnown RBP18.65■□□□□ 0.58
RAB11FIP3-207ENST00000461009 SLC24A1O60721 1099 aa18.64■□□□□ 0.57
RAB11FIP3-207ENST00000461009 KRT27Q7Z3Y8 459 aa18.64■□□□□ 0.57
RAB11FIP3-207ENST00000461009 KIAA0232Q92628 1395 aa18.64■□□□□ 0.57
RAB11FIP3-207ENST00000461009 FAM98CQ17RN3 349 aaKnown RBP18.63■□□□□ 0.57
RAB11FIP3-207ENST00000461009 ZNF692Q9BU19 519 aaPredicted RBP18.63■□□□□ 0.57
RAB11FIP3-207ENST00000461009 SPATA31A5Q5VU36 1347 aa18.61■□□□□ 0.57
RAB11FIP3-207ENST00000461009 SPATA31A7Q8IWB4 1347 aa18.61■□□□□ 0.57
RAB11FIP3-207ENST00000461009 CHRNA2Q15822 529 aa18.61■□□□□ 0.57
RAB11FIP3-207ENST00000461009 STRN4Q9NRL3 753 aa18.61■□□□□ 0.57
RAB11FIP3-207ENST00000461009 NLRP6P59044 892 aa18.6■□□□□ 0.57
RAB11FIP3-207ENST00000461009 NRAPQ86VF7 1730 aa18.6■□□□□ 0.57
RAB11FIP3-207ENST00000461009 CRYBG1Q9Y4K1 1723 aa18.6■□□□□ 0.57
RAB11FIP3-207ENST00000461009 BLMP54132 1417 aaPredicted RBP18.59■□□□□ 0.57
RAB11FIP3-207ENST00000461009 GCP02774 474 aa18.59■□□□□ 0.57
RAB11FIP3-207ENST00000461009 ZRANB1Q9UGI0 708 aa18.59■□□□□ 0.57
RAB11FIP3-207ENST00000461009 PHRF1Q9P1Y6 1649 aaKnown RBP18.59■□□□□ 0.57
RAB11FIP3-207ENST00000461009 USP6P35125 1406 aa18.58■□□□□ 0.57
RAB11FIP3-207ENST00000461009 SBNO2Q9Y2G9 1366 aa18.58■□□□□ 0.57
RAB11FIP3-207ENST00000461009 CPDO75976 1380 aa18.57■□□□□ 0.56
RAB11FIP3-207ENST00000461009 USP19O94966 1318 aa18.57■□□□□ 0.56
RAB11FIP3-207ENST00000461009 ST20-MTHFSA0A0A6YYL1 179 aa18.57■□□□□ 0.56
RAB11FIP3-207ENST00000461009 BRWD3Q6RI45 1802 aa18.56■□□□□ 0.56
RAB11FIP3-207ENST00000461009 SPATA31A1Q5TZJ5 1347 aa18.55■□□□□ 0.56
RAB11FIP3-207ENST00000461009 ZBTB7CA1YPR0 619 aa18.55■□□□□ 0.56
RAB11FIP3-207ENST00000461009 USP47Q96K76 1375 aa18.55■□□□□ 0.56
RAB11FIP3-207ENST00000461009 USP35Q9P2H5 1018 aa18.54■□□□□ 0.56
RAB11FIP3-207ENST00000461009 TTC21AQ8NDW8 1320 aa18.53■□□□□ 0.56
RAB11FIP3-207ENST00000461009 KCNH5Q8NCM2 988 aa18.53■□□□□ 0.56
RAB11FIP3-207ENST00000461009 PUS7Q96PZ0 661 aaKnown RBP18.53■□□□□ 0.56
RAB11FIP3-207ENST00000461009 TTC21BQ7Z4L5 1316 aa18.52■□□□□ 0.56
RAB11FIP3-207ENST00000461009 NRKQ7Z2Y5 1582 aa18.52■□□□□ 0.56
RAB11FIP3-207ENST00000461009 TMC1Q8TDI8 760 aa18.52■□□□□ 0.56
RAB11FIP3-207ENST00000461009 KTN1Q86UP2 1357 aaKnown RBP18.52■□□□□ 0.55
RAB11FIP3-207ENST00000461009 SSH2Q76I76 1423 aa18.51■□□□□ 0.55
RAB11FIP3-207ENST00000461009 BAG6P46379 1132 aa18.51■□□□□ 0.55
RAB11FIP3-207ENST00000461009 BARGINQ6ZT62 677 aa18.51■□□□□ 0.55
RAB11FIP3-207ENST00000461009 HDGFL2Q7Z4V5 671 aaPredicted RBP18.51■□□□□ 0.55
RAB11FIP3-207ENST00000461009 TCP11L2Q8N4U5 519 aa18.51■□□□□ 0.55
RAB11FIP3-207ENST00000461009 THRAP3Q9Y2W1 955 aaKnown RBP18.51■□□□□ 0.55
RAB11FIP3-207ENST00000461009 EIF4G2P78344 907 aaKnown RBP eCLIP18.5■□□□□ 0.55
RAB11FIP3-207ENST00000461009 TMF1P82094 1093 aa18.5■□□□□ 0.55
RAB11FIP3-207ENST00000461009 PDE3BQ13370 1112 aa18.5■□□□□ 0.55
RAB11FIP3-207ENST00000461009 LARP1Q6PKG0 1096 aaKnown RBP18.5■□□□□ 0.55
RAB11FIP3-207ENST00000461009 TESK2Q96S53 571 aa18.5■□□□□ 0.55
RAB11FIP3-207ENST00000461009 CDCA8Q53HL2 280 aa18.49■□□□□ 0.55
RAB11FIP3-207ENST00000461009 FAM196AQ6ZSG2 479 aa18.49■□□□□ 0.55
RAB11FIP3-207ENST00000461009 TERF2IPQ9NYB0 399 aa18.49■□□□□ 0.55
RAB11FIP3-207ENST00000461009 EP400Q96L91 3159 aa18.49■□□□□ 0.55
RAB11FIP3-207ENST00000461009 CAMTA1Q9Y6Y1 1673 aa18.48■□□□□ 0.55
RAB11FIP3-207ENST00000461009 AATKQ6ZMQ8 1374 aa18.48■□□□□ 0.55
RAB11FIP3-207ENST00000461009 DEFB132Q7Z7B7 95 aa18.48■□□□□ 0.55
RAB11FIP3-207ENST00000461009 CPSF1Q10570 1443 aaKnown RBP18.47■□□□□ 0.55
RAB11FIP3-207ENST00000461009 AKAP12Q02952 1782 aa18.46■□□□□ 0.55
RAB11FIP3-207ENST00000461009 SLIT3O75094 1523 aa18.46■□□□□ 0.55
RAB11FIP3-207ENST00000461009 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.46■□□□□ 0.55
RAB11FIP3-207ENST00000461009 THSD7AQ9UPZ6 1657 aa18.45■□□□□ 0.54
RAB11FIP3-207ENST00000461009 C11orf95C9JLR9 678 aaPredicted RBP18.45■□□□□ 0.54
RAB11FIP3-207ENST00000461009 SOX12O15370 315 aa18.45■□□□□ 0.54
RAB11FIP3-207ENST00000461009 TOM1L2Q6ZVM7 507 aa18.45■□□□□ 0.54
RAB11FIP3-207ENST00000461009 COL5A2P05997 1499 aaPredicted RBP18.45■□□□□ 0.54
RAB11FIP3-207ENST00000461009 PIK3C2AO00443 1686 aa18.44■□□□□ 0.54
RAB11FIP3-207ENST00000461009 LMO7Q8WWI1 1683 aa18.44■□□□□ 0.54
RAB11FIP3-207ENST00000461009 CRB1P82279 1406 aa18.44■□□□□ 0.54
RAB11FIP3-207ENST00000461009 FAM182BQ5T319 152 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 226.3 ms