RNA–Protein interactions for RNA: ENST00000460945.5

APTX-210, Transcript of aprataxin, humanhuman

TSL 4

Gene APTX, Length 542 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-210ENST00000460945 CCDC61Q9Y6R9 512 aa23.69■■□□□ 1.38
APTX-210ENST00000460945 UNC5CLQ8IV45 518 aa23.67■■□□□ 1.38
APTX-210ENST00000460945 UPF1Q92900 1129 aaKnown RBP eCLIP23.67■■□□□ 1.38
APTX-210ENST00000460945 NWD2Q9ULI1 1742 aa23.67■■□□□ 1.38
APTX-210ENST00000460945 POLR3AO14802 1390 aaPredicted RBP23.66■■□□□ 1.38
APTX-210ENST00000460945 PLEKHG3A1L390 1219 aa23.66■■□□□ 1.38
APTX-210ENST00000460945 TONSLQ96HA7 1378 aa23.65■■□□□ 1.38
APTX-210ENST00000460945 FAM83GA6ND36 823 aa23.64■■□□□ 1.37
APTX-210ENST00000460945 GJD4Q96KN9 370 aaPredicted RBP23.64■■□□□ 1.37
APTX-210ENST00000460945 PPIP5K1Q6PFW1 1433 aa23.64■■□□□ 1.37
APTX-210ENST00000460945 GLI3P10071 1580 aa23.63■■□□□ 1.37
APTX-210ENST00000460945 NUTM2GQ5VZR2 741 aa23.62■■□□□ 1.37
APTX-210ENST00000460945 NRAPQ86VF7 1730 aa23.62■■□□□ 1.37
APTX-210ENST00000460945 PHRF1Q9P1Y6 1649 aaKnown RBP23.61■■□□□ 1.37
APTX-210ENST00000460945 RALGAPBQ86X10 1494 aa23.61■■□□□ 1.37
APTX-210ENST00000460945 COL14A1Q05707 1796 aaKnown RBP23.6■■□□□ 1.37
APTX-210ENST00000460945 BRWD3Q6RI45 1802 aa23.59■■□□□ 1.37
APTX-210ENST00000460945 EVC2Q86UK5 1308 aa23.59■■□□□ 1.37
APTX-210ENST00000460945 CABP1Q9NZU7 370 aa23.58■■□□□ 1.37
APTX-210ENST00000460945 CARD11Q9BXL7 1154 aa23.57■■□□□ 1.36
APTX-210ENST00000460945 VPS72Q15906 364 aa23.55■■□□□ 1.36
APTX-210ENST00000460945 BTG4Q9NY30 223 aa23.55■■□□□ 1.36
APTX-210ENST00000460945 EP400Q96L91 3159 aa23.55■■□□□ 1.36
APTX-210ENST00000460945 ABTB2Q8N961 1025 aa23.54■■□□□ 1.36
APTX-210ENST00000460945 CCDC9Q9Y3X0 531 aaKnown RBP23.54■■□□□ 1.36
APTX-210ENST00000460945 AKAP12Q02952 1782 aa23.53■■□□□ 1.36
APTX-210ENST00000460945 ATAD2Q6PL18 1390 aa23.52■■□□□ 1.36
APTX-210ENST00000460945 KIAA0232Q92628 1395 aa23.52■■□□□ 1.36
APTX-210ENST00000460945 ZC3H6P61129 1189 aaKnown RBP23.51■■□□□ 1.35
APTX-210ENST00000460945 PRDM11Q9NQV5 511 aa23.51■■□□□ 1.35
APTX-210ENST00000460945 USP6P35125 1406 aa23.5■■□□□ 1.35
APTX-210ENST00000460945 NRKQ7Z2Y5 1582 aa23.5■■□□□ 1.35
APTX-210ENST00000460945 CHRNA2Q15822 529 aa23.5■■□□□ 1.35
APTX-210ENST00000460945 SEPT12Q8IYM1 358 aa23.47■■□□□ 1.35
APTX-210ENST00000460945 PCGF6Q9BYE7 350 aa23.47■■□□□ 1.35
APTX-210ENST00000460945 PIK3C2AO00443 1686 aa23.47■■□□□ 1.35
APTX-210ENST00000460945 USP19O94966 1318 aa23.46■■□□□ 1.35
APTX-210ENST00000460945 SSH2Q76I76 1423 aa23.46■■□□□ 1.35
APTX-210ENST00000460945 SBNO2Q9Y2G9 1366 aa23.46■■□□□ 1.35
APTX-210ENST00000460945 BRD4O60885 1362 aaPredicted RBP23.45■■□□□ 1.34
APTX-210ENST00000460945 ONECUT3O60422 494 aaPredicted RBP23.45■■□□□ 1.34
APTX-210ENST00000460945 NLRP13Q86W25 1043 aa23.45■■□□□ 1.34
APTX-210ENST00000460945 MON2Q7Z3U7 1717 aa23.43■■□□□ 1.34
APTX-210ENST00000460945 FAM98CQ17RN3 349 aaKnown RBP23.43■■□□□ 1.34
APTX-210ENST00000460945 SPATA31A5Q5VU36 1347 aa23.42■■□□□ 1.34
APTX-210ENST00000460945 SPATA31A7Q8IWB4 1347 aa23.42■■□□□ 1.34
APTX-210ENST00000460945 GCP02774 474 aa23.42■■□□□ 1.34
APTX-210ENST00000460945 NLRP6P59044 892 aa23.42■■□□□ 1.34
APTX-210ENST00000460945 LMO7Q8WWI1 1683 aa23.41■■□□□ 1.34
APTX-210ENST00000460945 TTC21BQ7Z4L5 1316 aa23.41■■□□□ 1.34
APTX-210ENST00000460945 ZNF692Q9BU19 519 aaPredicted RBP23.41■■□□□ 1.34
APTX-210ENST00000460945 STRN4Q9NRL3 753 aa23.41■■□□□ 1.34
APTX-210ENST00000460945 CAMTA1Q9Y6Y1 1673 aa23.41■■□□□ 1.34
APTX-210ENST00000460945 A0A0G2JS52 829 aa23.4■■□□□ 1.34
APTX-210ENST00000460945 MYT1Q01538 1121 aa23.4■■□□□ 1.34
APTX-210ENST00000460945 CPSF1Q10570 1443 aaKnown RBP23.4■■□□□ 1.34
APTX-210ENST00000460945 CPDO75976 1380 aa23.4■■□□□ 1.34
APTX-210ENST00000460945 SLIT3O75094 1523 aa23.39■■□□□ 1.34
APTX-210ENST00000460945 ST20-MTHFSA0A0A6YYL1 179 aa23.38■■□□□ 1.33
APTX-210ENST00000460945 KTN1Q86UP2 1357 aaKnown RBP23.38■■□□□ 1.33
APTX-210ENST00000460945 TMC1Q8TDI8 760 aa23.37■■□□□ 1.33
APTX-210ENST00000460945 TESK2Q96S53 571 aa23.37■■□□□ 1.33
APTX-210ENST00000460945 THSD7AQ9UPZ6 1657 aa23.37■■□□□ 1.33
APTX-210ENST00000460945 CD163L1Q9NR16 1453 aa23.36■■□□□ 1.33
APTX-210ENST00000460945 SPATA31A1Q5TZJ5 1347 aa23.36■■□□□ 1.33
APTX-210ENST00000460945 ZBTB7CA1YPR0 619 aa23.36■■□□□ 1.33
APTX-210ENST00000460945 EVA1CP58658 441 aa23.36■■□□□ 1.33
APTX-210ENST00000460945 KRT27Q7Z3Y8 459 aa23.36■■□□□ 1.33
APTX-210ENST00000460945 SLC12A5Q9H2X9 1139 aa23.36■■□□□ 1.33
APTX-210ENST00000460945 RGPD5Q99666 1765 aa23.35■■□□□ 1.33
APTX-210ENST00000460945 COL18A1P39060 1754 aa23.35■■□□□ 1.33
APTX-210ENST00000460945 TTC21AQ8NDW8 1320 aa23.33■■□□□ 1.33
APTX-210ENST00000460945 LARP1Q6PKG0 1096 aaKnown RBP23.33■■□□□ 1.33
APTX-210ENST00000460945 USP35Q9P2H5 1018 aa23.33■■□□□ 1.33
APTX-210ENST00000460945 ZRANB1Q9UGI0 708 aa23.32■■□□□ 1.32
APTX-210ENST00000460945 SOX12O15370 315 aa23.31■■□□□ 1.32
APTX-210ENST00000460945 CCDC125Q86Z20 511 aa23.31■■□□□ 1.32
APTX-210ENST00000460945 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.31■■□□□ 1.322e-6■■■□□ 17.9
APTX-210ENST00000460945 CLSPNQ9HAW4 1339 aa23.31■■□□□ 1.32
APTX-210ENST00000460945 COL5A2P05997 1499 aaPredicted RBP23.3■■□□□ 1.32
APTX-210ENST00000460945 USP47Q96K76 1375 aa23.3■■□□□ 1.32
APTX-210ENST00000460945 FAM182BQ5T319 152 aa23.3■■□□□ 1.32
APTX-210ENST00000460945 BLMP54132 1417 aaPredicted RBP23.29■■□□□ 1.32
APTX-210ENST00000460945 PUS7Q96PZ0 661 aaKnown RBP23.29■■□□□ 1.32
APTX-210ENST00000460945 USP54Q70EL1 1684 aa23.28■■□□□ 1.32
APTX-210ENST00000460945 AATKQ6ZMQ8 1374 aa23.28■■□□□ 1.32
APTX-210ENST00000460945 HDGFL2Q7Z4V5 671 aaPredicted RBP23.28■■□□□ 1.32
APTX-210ENST00000460945 NME9Q86XW9 330 aa23.28■■□□□ 1.32
APTX-210ENST00000460945 NFAT5O94916 1531 aa23.28■■□□□ 1.32
APTX-210ENST00000460945 A0A1W2PP64 1363 aa23.27■■□□□ 1.32
APTX-210ENST00000460945 TIMELESSQ9UNS1 1208 aa23.27■■□□□ 1.32
APTX-210ENST00000460945 AXIN2Q9Y2T1 843 aa23.26■■□□□ 1.31
APTX-210ENST00000460945 DEFB132Q7Z7B7 95 aa23.25■■□□□ 1.31
APTX-210ENST00000460945 ARHGEF25Q86VW2 580 aa23.25■■□□□ 1.31
APTX-210ENST00000460945 KCNH5Q8NCM2 988 aa23.25■■□□□ 1.31
APTX-210ENST00000460945 TERF2IPQ9NYB0 399 aa23.25■■□□□ 1.31
APTX-210ENST00000460945 LTN1O94822 1766 aa23.24■■□□□ 1.31
APTX-210ENST00000460945 BARGINQ6ZT62 677 aa23.24■■□□□ 1.31
APTX-210ENST00000460945 TCP11L2Q8N4U5 519 aa23.24■■□□□ 1.31
APTX-210ENST00000460945 USP31Q70CQ4 1352 aa23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms