RNA–Protein interactions for RNA: ENST00000460940.5

APTX-209, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,874 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-209ENST00000460940 SSH2Q76I76 1423 aa15.42■□□□□ 0.06
APTX-209ENST00000460940 CENPBP07199 599 aaPredicted RBP15.42■□□□□ 0.06
APTX-209ENST00000460940 TERF2IPQ9NYB0 399 aa15.42■□□□□ 0.06
APTX-209ENST00000460940 KTN1Q86UP2 1357 aaKnown RBP15.41■□□□□ 0.06
APTX-209ENST00000460940 MON2Q7Z3U7 1717 aa15.41■□□□□ 0.06
APTX-209ENST00000460940 PAK3O75914 559 aaPredicted RBP15.41■□□□□ 0.06
APTX-209ENST00000460940 HDGFL2Q7Z4V5 671 aaPredicted RBP15.41■□□□□ 0.06
APTX-209ENST00000460940 NRKQ7Z2Y5 1582 aa15.41■□□□□ 0.06
APTX-209ENST00000460940 LMOD2Q6P5Q4 547 aa15.4■□□□□ 0.06
APTX-209ENST00000460940 SLC12A5Q9H2X9 1139 aa15.4■□□□□ 0.06
APTX-209ENST00000460940 A0A1W2PP64 1363 aa15.39■□□□□ 0.05
APTX-209ENST00000460940 ANKRD36BQ8N2N9 1353 aa15.39■□□□□ 0.05
APTX-209ENST00000460940 NUTM2BA6NNL0 878 aaPredicted RBP15.39■□□□□ 0.05
APTX-209ENST00000460940 NUTM2EB1AL46 878 aaPredicted RBP15.39■□□□□ 0.05
APTX-209ENST00000460940 NUTM2AQ8IVF1 878 aaPredicted RBP15.39■□□□□ 0.05
APTX-209ENST00000460940 ABCA3Q99758 1704 aa15.38■□□□□ 0.05
APTX-209ENST00000460940 TTC21AQ8NDW8 1320 aa15.38■□□□□ 0.05
APTX-209ENST00000460940 MEX3CQ5U5Q3 659 aaKnown RBP15.38■□□□□ 0.05
APTX-209ENST00000460940 EDC4Q6P2E9 1401 aaKnown RBP15.38■□□□□ 0.05
APTX-209ENST00000460940 MYOM1P52179 1685 aa15.38■□□□□ 0.05
APTX-209ENST00000460940 PRKCSHP14314 528 aaPredicted RBP15.37■□□□□ 0.05
APTX-209ENST00000460940 GTF3C3Q9Y5Q9 886 aa15.37■□□□□ 0.05
APTX-209ENST00000460940 TTC21BQ7Z4L5 1316 aa15.36■□□□□ 0.05
APTX-209ENST00000460940 ABTB2Q8N961 1025 aa15.36■□□□□ 0.05
APTX-209ENST00000460940 PHF23Q9BUL5 403 aaPredicted RBP15.36■□□□□ 0.05
APTX-209ENST00000460940 CRYBG1Q9Y4K1 1723 aa15.36■□□□□ 0.05
APTX-209ENST00000460940 PIK3C2AO00443 1686 aa15.35■□□□□ 0.05
APTX-209ENST00000460940 USP19O94966 1318 aa15.35■□□□□ 0.05
APTX-209ENST00000460940 HAP1P54257 671 aaPredicted RBP15.35■□□□□ 0.05
APTX-209ENST00000460940 NLRP13Q86W25 1043 aa15.34■□□□□ 0.05
APTX-209ENST00000460940 MARF1Q9Y4F3 1742 aaKnown RBP15.34■□□□□ 0.05
APTX-209ENST00000460940 PHRF1Q9P1Y6 1649 aaKnown RBP15.34■□□□□ 0.05
APTX-209ENST00000460940 ADAMTS2O95450 1211 aa15.33■□□□□ 0.05
APTX-209ENST00000460940 USP54Q70EL1 1684 aa15.33■□□□□ 0.04
APTX-209ENST00000460940 CABLES1Q8TDN4 633 aa15.33■□□□□ 0.04
APTX-209ENST00000460940 USP31Q70CQ4 1352 aa15.32■□□□□ 0.04
APTX-209ENST00000460940 SLIT3O75094 1523 aa15.32■□□□□ 0.04
APTX-209ENST00000460940 NLRP6P59044 892 aa15.31■□□□□ 0.04
APTX-209ENST00000460940 C8orf37Q96NL8 207 aa15.31■□□□□ 0.04
APTX-209ENST00000460940 POLR3GLQ9BT43 218 aa15.31■□□□□ 0.04
APTX-209ENST00000460940 KIF7Q2M1P5 1343 aa15.31■□□□□ 0.04
APTX-209ENST00000460940 C11orf95C9JLR9 678 aaPredicted RBP15.31■□□□□ 0.04
APTX-209ENST00000460940 NUTM2GQ5VZR2 741 aa15.31■□□□□ 0.04
APTX-209ENST00000460940 ZNF772Q68DY9 489 aaPredicted RBP15.3■□□□□ 0.04
APTX-209ENST00000460940 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.3■□□□□ 0.04
APTX-209ENST00000460940 NGLY1Q96IV0 654 aa15.29■□□□□ 0.04
APTX-209ENST00000460940 AFF2P51816 1311 aa15.29■□□□□ 0.04
APTX-209ENST00000460940 PLEKHG5O94827 1062 aa15.29■□□□□ 0.04
APTX-209ENST00000460940 FNBP4Q8N3X1 1017 aaPredicted RBP15.29■□□□□ 0.04
APTX-209ENST00000460940 CPDO75976 1380 aa15.28■□□□□ 0.04
APTX-209ENST00000460940 CCDC7Q96M83 1385 aa15.28■□□□□ 0.04
APTX-209ENST00000460940 OVOS2A0A0J9YW53 1432 aa15.28■□□□□ 0.04
APTX-209ENST00000460940 OVOS2Q6IE36 1432 aa15.28■□□□□ 0.04
APTX-209ENST00000460940 NSD3Q9BZ95 1437 aa15.28■□□□□ 0.04
APTX-209ENST00000460940 NME9Q86XW9 330 aa15.28■□□□□ 0.04
APTX-209ENST00000460940 COL14A1Q05707 1796 aaKnown RBP15.28■□□□□ 0.04
APTX-209ENST00000460940 SLIT2O94813 1529 aa15.28■□□□□ 0.04
APTX-209ENST00000460940 GCP02774 474 aa15.27■□□□□ 0.04
APTX-209ENST00000460940 KCNH5Q8NCM2 988 aa15.27■□□□□ 0.04
APTX-209ENST00000460940 RGS17Q9UGC6 210 aaPredicted RBP15.27■□□□□ 0.03
APTX-209ENST00000460940 KIAA0232Q92628 1395 aa15.27■□□□□ 0.03
APTX-209ENST00000460940 NWD2Q9ULI1 1742 aa15.26■□□□□ 0.03
APTX-209ENST00000460940 PLCH1Q4KWH8 1693 aa15.26■□□□□ 0.03
APTX-209ENST00000460940 PRDM11Q9NQV5 511 aa15.26■□□□□ 0.03
APTX-209ENST00000460940 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.25■□□□□ 0.03
APTX-209ENST00000460940 NFAT5O94916 1531 aa15.25■□□□□ 0.03
APTX-209ENST00000460940 WASHC2AQ641Q2 1341 aa15.25■□□□□ 0.03
APTX-209ENST00000460940 CARD14Q9BXL6 1004 aa15.25■□□□□ 0.03
APTX-209ENST00000460940 USP21Q9UK80 565 aa15.25■□□□□ 0.03
APTX-209ENST00000460940 KIF20BQ96Q89 1820 aa15.24■□□□□ 0.03
APTX-209ENST00000460940 BCL9LQ86UU0 1499 aa15.24■□□□□ 0.03
APTX-209ENST00000460940 CGNL1Q0VF96 1302 aa15.24■□□□□ 0.03
APTX-209ENST00000460940 COG3Q96JB2 828 aa15.24■□□□□ 0.03
APTX-209ENST00000460940 ABCC6O95255 1503 aa15.24■□□□□ 0.03
APTX-209ENST00000460940 FAM83GA6ND36 823 aa15.23■□□□□ 0.03
APTX-209ENST00000460940 ERICH6Q7L0X2 663 aa15.23■□□□□ 0.03
APTX-209ENST00000460940 PANK3Q9H999 370 aa15.23■□□□□ 0.03
APTX-209ENST00000460940 FYB1O15117 783 aa15.23■□□□□ 0.03
APTX-209ENST00000460940 ZC3H6P61129 1189 aaKnown RBP15.23■□□□□ 0.03
APTX-209ENST00000460940 ZRANB1Q9UGI0 708 aa15.23■□□□□ 0.03
APTX-209ENST00000460940 ATRNO75882 1429 aa15.22■□□□□ 0.03
APTX-209ENST00000460940 UNC5CLQ8IV45 518 aa15.22■□□□□ 0.03
APTX-209ENST00000460940 NSD2O96028 1365 aa15.22■□□□□ 0.03
APTX-209ENST00000460940 NRAPQ86VF7 1730 aa15.21■□□□□ 0.03
APTX-209ENST00000460940 LMO7Q8WWI1 1683 aa15.21■□□□□ 0.03
APTX-209ENST00000460940 TRPC5Q9UL62 973 aaPredicted RBP15.21■□□□□ 0.03
APTX-209ENST00000460940 AATKQ6ZMQ8 1374 aa15.21■□□□□ 0.03
APTX-209ENST00000460940 POTEAQ6S8J7 498 aa15.2■□□□□ 0.02
APTX-209ENST00000460940 ARHGEF25Q86VW2 580 aa15.2■□□□□ 0.02
APTX-209ENST00000460940 BTG4Q9NY30 223 aa15.2■□□□□ 0.02
APTX-209ENST00000460940 CHRNA2Q15822 529 aa15.19■□□□□ 0.02
APTX-209ENST00000460940 GGNBP2Q9H3C7 697 aa15.19■□□□□ 0.02
APTX-209ENST00000460940 QTRT2Q9H974 415 aaKnown RBP15.18■□□□□ 0.02
APTX-209ENST00000460940 KNSTRNQ9Y448 316 aa15.18■□□□□ 0.02
APTX-209ENST00000460940 SOX12O15370 315 aa15.18■□□□□ 0.02
APTX-209ENST00000460940 VPS72Q15906 364 aa15.18■□□□□ 0.02
APTX-209ENST00000460940 CDK12Q9NYV4 1490 aaPredicted RBP15.18■□□□□ 0.02
APTX-209ENST00000460940 ANKRD26Q9UPS8 1709 aa15.17■□□□□ 0.02
APTX-209ENST00000460940 CAMTA1Q9Y6Y1 1673 aa15.17■□□□□ 0.02
APTX-209ENST00000460940 RBM6P78332 1123 aaKnown RBP15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms