RNA–Protein interactions for RNA: ENST00000460767.5

SCAMP4-206, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-206ENST00000460767 MYT1Q01538 1121 aa20.08■□□□□ 0.81
SCAMP4-206ENST00000460767 PRAM1Q96QH2 718 aa20.08■□□□□ 0.81
SCAMP4-206ENST00000460767 GPRASP1Q5JY77 1395 aa20.08■□□□□ 0.8
SCAMP4-206ENST00000460767 LMOD2Q6P5Q4 547 aa20.07■□□□□ 0.8
SCAMP4-206ENST00000460767 PHRF1Q9P1Y6 1649 aaKnown RBP20.06■□□□□ 0.8
SCAMP4-206ENST00000460767 ITSN1Q15811 1721 aa20.05■□□□□ 0.8
SCAMP4-206ENST00000460767 R3HDM1Q15032 1099 aaKnown RBP20.05■□□□□ 0.8
SCAMP4-206ENST00000460767 CFAP70Q5T0N1 1121 aa20.05■□□□□ 0.8
SCAMP4-206ENST00000460767 TRIM26Q12899 539 aaPredicted RBP20.04■□□□□ 0.8
SCAMP4-206ENST00000460767 PMFBP1Q8TBY8 1022 aa20.04■□□□□ 0.8
SCAMP4-206ENST00000460767 NUP188Q5SRE5 1749 aa20.04■□□□□ 0.8
SCAMP4-206ENST00000460767 CAMKK2Q96RR4 588 aa20.03■□□□□ 0.8
SCAMP4-206ENST00000460767 ATP7BP35670 1465 aa20.03■□□□□ 0.8
SCAMP4-206ENST00000460767 SPATA31A1Q5TZJ5 1347 aa20.02■□□□□ 0.8
SCAMP4-206ENST00000460767 PRR36Q9H6K5 1346 aa20.02■□□□□ 0.79
SCAMP4-206ENST00000460767 EZH2Q15910 746 aaKnown RBP20.01■□□□□ 0.79
SCAMP4-206ENST00000460767 FAM196AQ6ZSG2 479 aa20.01■□□□□ 0.79
SCAMP4-206ENST00000460767 PLEKHG5O94827 1062 aa19.99■□□□□ 0.79
SCAMP4-206ENST00000460767 SAFB2Q14151 953 aaKnown RBP eCLIP19.99■□□□□ 0.79
SCAMP4-206ENST00000460767 PRDM11Q9NQV5 511 aa19.99■□□□□ 0.79
SCAMP4-206ENST00000460767 POGKQ9P215 609 aa19.99■□□□□ 0.79
SCAMP4-206ENST00000460767 FAM182BQ5T319 152 aa19.98■□□□□ 0.79
SCAMP4-206ENST00000460767 RGPD3A6NKT7 1758 aaPredicted RBP19.98■□□□□ 0.79
SCAMP4-206ENST00000460767 RGPD4Q7Z3J3 1758 aa19.98■□□□□ 0.79
SCAMP4-206ENST00000460767 WASLO00401 505 aaPredicted RBP19.96■□□□□ 0.79
SCAMP4-206ENST00000460767 BARGINQ6ZT62 677 aa19.96■□□□□ 0.79
SCAMP4-206ENST00000460767 TOPAZ1Q8N9V7 1692 aa19.96■□□□□ 0.79
SCAMP4-206ENST00000460767 LMO7Q8WWI1 1683 aa19.96■□□□□ 0.79
SCAMP4-206ENST00000460767 ARHGEF28Q8N1W1 1705 aaKnown RBP19.96■□□□□ 0.79
SCAMP4-206ENST00000460767 KIAA0232Q92628 1395 aa19.95■□□□□ 0.79
SCAMP4-206ENST00000460767 NRKQ7Z2Y5 1582 aa19.95■□□□□ 0.78
SCAMP4-206ENST00000460767 PARP4Q9UKK3 1724 aaKnown RBP19.94■□□□□ 0.78
SCAMP4-206ENST00000460767 TRIM37O94972 964 aa19.94■□□□□ 0.78
SCAMP4-206ENST00000460767 SSH2Q76I76 1423 aa19.93■□□□□ 0.78
SCAMP4-206ENST00000460767 NINLQ9Y2I6 1382 aa19.92■□□□□ 0.78
SCAMP4-206ENST00000460767 APBA3O96018 575 aa19.91■□□□□ 0.78
SCAMP4-206ENST00000460767 NGDNQ8NEJ9 315 aaKnown RBP19.91■□□□□ 0.78
SCAMP4-206ENST00000460767 HIRIP3Q9BW71 556 aaPredicted RBP19.91■□□□□ 0.78
SCAMP4-206ENST00000460767 MINK1Q8N4C8 1332 aaPredicted RBP19.91■□□□□ 0.78
SCAMP4-206ENST00000460767 POLR3AO14802 1390 aaPredicted RBP19.91■□□□□ 0.78
SCAMP4-206ENST00000460767 YY1P25490 414 aa19.9■□□□□ 0.78
SCAMP4-206ENST00000460767 STAC3Q96MF2 364 aa19.9■□□□□ 0.78
SCAMP4-206ENST00000460767 CPDO75976 1380 aa19.9■□□□□ 0.78
SCAMP4-206ENST00000460767 C11orf95C9JLR9 678 aaPredicted RBP19.89■□□□□ 0.77
SCAMP4-206ENST00000460767 PEAK1Q9H792 1746 aa19.89■□□□□ 0.77
SCAMP4-206ENST00000460767 TRAK1Q9UPV9 953 aa19.89■□□□□ 0.77
SCAMP4-206ENST00000460767 CAMTA1Q9Y6Y1 1673 aa19.89■□□□□ 0.77
SCAMP4-206ENST00000460767 NBPF8Q3BBV2 869 aa19.88■□□□□ 0.77
SCAMP4-206ENST00000460767 NBPF14Q5TI25 921 aa19.88■□□□□ 0.77
SCAMP4-206ENST00000460767 PAK3O75914 559 aaPredicted RBP19.87■□□□□ 0.77
SCAMP4-206ENST00000460767 THRAP3Q9Y2W1 955 aaKnown RBP19.87■□□□□ 0.77
SCAMP4-206ENST00000460767 CASZ1Q86V15 1759 aa19.85■□□□□ 0.77
SCAMP4-206ENST00000460767 USP19O94966 1318 aa19.85■□□□□ 0.77
SCAMP4-206ENST00000460767 PDE3BQ13370 1112 aa19.85■□□□□ 0.77
SCAMP4-206ENST00000460767 CHRNA2Q15822 529 aa19.85■□□□□ 0.77
SCAMP4-206ENST00000460767 SPON1Q9HCB6 807 aa19.85■□□□□ 0.77
SCAMP4-206ENST00000460767 STRN4Q9NRL3 753 aa19.85■□□□□ 0.77
SCAMP4-206ENST00000460767 TCP11L2Q8N4U5 519 aa19.84■□□□□ 0.77
SCAMP4-206ENST00000460767 NUDT16Q96DE0 195 aaKnown RBP19.83■□□□□ 0.77
SCAMP4-206ENST00000460767 SBF2Q86WG5 1849 aa19.83■□□□□ 0.76
SCAMP4-206ENST00000460767 COL5A2P05997 1499 aaPredicted RBP19.82■□□□□ 0.76
SCAMP4-206ENST00000460767 KCNQ2O43526 872 aa19.82■□□□□ 0.76
SCAMP4-206ENST00000460767 LRRC37A3O60309 1634 aa19.82■□□□□ 0.76
SCAMP4-206ENST00000460767 OVOS2A0A0G2JMS6 1433 aa19.82■□□□□ 0.76
SCAMP4-206ENST00000460767 OVOS2A0A0J9YW53 1432 aa19.82■□□□□ 0.76
SCAMP4-206ENST00000460767 OVOS2Q6IE36 1432 aa19.82■□□□□ 0.76
SCAMP4-206ENST00000460767 ZC3H6P61129 1189 aaKnown RBP19.81■□□□□ 0.76
SCAMP4-206ENST00000460767 KIAA1210Q9ULL0 1709 aa19.8■□□□□ 0.76
SCAMP4-206ENST00000460767 WNK3Q9BYP7 1800 aa19.8■□□□□ 0.76
SCAMP4-206ENST00000460767 BRD4O60885 1362 aaPredicted RBP19.8■□□□□ 0.76
SCAMP4-206ENST00000460767 CRB1P82279 1406 aa19.79■□□□□ 0.76
SCAMP4-206ENST00000460767 PLEKHG3A1L390 1219 aa19.79■□□□□ 0.76
SCAMP4-206ENST00000460767 LARP1Q6PKG0 1096 aaKnown RBP19.79■□□□□ 0.76
SCAMP4-206ENST00000460767 BCL9O00512 1426 aa19.78■□□□□ 0.76
SCAMP4-206ENST00000460767 PLSCR1O15162 318 aa19.78■□□□□ 0.76
SCAMP4-206ENST00000460767 EVA1CP58658 441 aa19.78■□□□□ 0.76
SCAMP4-206ENST00000460767 DCAF11Q8TEB1 546 aa19.78■□□□□ 0.76
SCAMP4-206ENST00000460767 USP35Q9P2H5 1018 aa19.78■□□□□ 0.76
SCAMP4-206ENST00000460767 CCDC61Q9Y6R9 512 aa19.78■□□□□ 0.76
SCAMP4-206ENST00000460767 ACEP12821 1306 aa19.77■□□□□ 0.76
SCAMP4-206ENST00000460767 DCAF8L1A6NGE4 600 aa19.77■□□□□ 0.76
SCAMP4-206ENST00000460767 PPP1R1BQ9UD71 204 aaPredicted RBP19.77■□□□□ 0.76
SCAMP4-206ENST00000460767 SIN3AQ96ST3 1273 aa19.76■□□□□ 0.75
SCAMP4-206ENST00000460767 SLIT3O75094 1523 aa19.76■□□□□ 0.75
SCAMP4-206ENST00000460767 CDK19Q9BWU1 502 aa19.74■□□□□ 0.75
SCAMP4-206ENST00000460767 ABTB2Q8N961 1025 aa19.73■□□□□ 0.75
SCAMP4-206ENST00000460767 AATKQ6ZMQ8 1374 aa19.72■□□□□ 0.75
SCAMP4-206ENST00000460767 MYOM1P52179 1685 aa19.72■□□□□ 0.75
SCAMP4-206ENST00000460767 NUTM2GQ5VZR2 741 aa19.72■□□□□ 0.75
SCAMP4-206ENST00000460767 NLRP13Q86W25 1043 aa19.72■□□□□ 0.75
SCAMP4-206ENST00000460767 L3MBTL2Q969R5 705 aa19.72■□□□□ 0.75
SCAMP4-206ENST00000460767 COL18A1P39060 1754 aa19.72■□□□□ 0.75
SCAMP4-206ENST00000460767 AKAP12Q02952 1782 aa19.72■□□□□ 0.75
SCAMP4-206ENST00000460767 GCP02774 474 aa19.71■□□□□ 0.75
SCAMP4-206ENST00000460767 ANO8Q9HCE9 1232 aaPredicted RBP19.7■□□□□ 0.74
SCAMP4-206ENST00000460767 KDM2AQ9Y2K7 1162 aa19.7■□□□□ 0.74
SCAMP4-206ENST00000460767 BCL11BQ9C0K0 894 aaPredicted RBP19.69■□□□□ 0.74
SCAMP4-206ENST00000460767 PPIP5K1Q6PFW1 1433 aa19.68■□□□□ 0.74
SCAMP4-206ENST00000460767 TRPM1Q7Z4N2 1603 aa19.67■□□□□ 0.74
SCAMP4-206ENST00000460767 USP6P35125 1406 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms