RNA–Protein interactions for RNA: ENST00000460658.5

SMTN-213, Transcript of smoothelin, humanhuman

TSL 5

Gene SMTN, Length 5,080 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMTN-213ENST00000460658 ANKRD1Q15327 319 aa16.85■□□□□ 0.29
SMTN-213ENST00000460658 CDCA7LQ96GN5 454 aa16.85■□□□□ 0.29
SMTN-213ENST00000460658 ABCA10Q8WWZ4 1543 aa16.84■□□□□ 0.29
SMTN-213ENST00000460658 CUL7Q14999 1698 aa16.84■□□□□ 0.29
SMTN-213ENST00000460658 PRKAR2BP31323 418 aa16.84■□□□□ 0.29
SMTN-213ENST00000460658 MVPQ14764 893 aaKnown RBP16.84■□□□□ 0.29
SMTN-213ENST00000460658 ANO8Q9HCE9 1232 aaPredicted RBP16.84■□□□□ 0.29
SMTN-213ENST00000460658 RRP12Q5JTH9 1297 aaKnown RBP16.84■□□□□ 0.29
SMTN-213ENST00000460658 OLFM4Q6UX06 510 aa16.84■□□□□ 0.29
SMTN-213ENST00000460658 NFXL1Q6ZNB6 911 aa16.84■□□□□ 0.29
SMTN-213ENST00000460658 ATF7IPQ6VMQ6 1270 aa16.83■□□□□ 0.29
SMTN-213ENST00000460658 CDR1P51861 262 aa16.83■□□□□ 0.28
SMTN-213ENST00000460658 EPRSP07814 1512 aaKnown RBP16.82■□□□□ 0.28
SMTN-213ENST00000460658 ABCC11Q96J66 1382 aa16.82■□□□□ 0.28
SMTN-213ENST00000460658 NOM1Q5C9Z4 860 aaKnown RBP16.82■□□□□ 0.28
SMTN-213ENST00000460658 IL27Q8NEV9 243 aa16.82■□□□□ 0.28
SMTN-213ENST00000460658 ZNF396Q96N95 335 aaPredicted RBP16.82■□□□□ 0.28
SMTN-213ENST00000460658 TSPY26PQ9H489 355 aa16.81■□□□□ 0.28
SMTN-213ENST00000460658 WDR97A6NE52 1622 aa16.81■□□□□ 0.28
SMTN-213ENST00000460658 PIP4K2AP48426 406 aaPredicted RBP16.81■□□□□ 0.28
SMTN-213ENST00000460658 FCHSD2O94868 740 aa16.81■□□□□ 0.28
SMTN-213ENST00000460658 FOXD4L6Q3SYB3 417 aaPredicted RBP16.81■□□□□ 0.28
SMTN-213ENST00000460658 FOXD4L3Q6VB84 417 aaPredicted RBP16.81■□□□□ 0.28
SMTN-213ENST00000460658 CCAR2Q8N163 923 aaKnown RBP16.81■□□□□ 0.28
SMTN-213ENST00000460658 SART3Q15020 963 aaKnown RBP16.8■□□□□ 0.28
SMTN-213ENST00000460658 MNS1Q8NEH6 495 aa16.8■□□□□ 0.28
SMTN-213ENST00000460658 NBPF1Q3BBV0 1214 aa16.8■□□□□ 0.28
SMTN-213ENST00000460658 NLRP6P59044 892 aa16.8■□□□□ 0.28
SMTN-213ENST00000460658 VPS37DQ86XT2 251 aa16.8■□□□□ 0.28
SMTN-213ENST00000460658 RPAP2Q8IXW5 612 aaPredicted RBP16.8■□□□□ 0.28
SMTN-213ENST00000460658 ZNF592Q92610 1267 aa16.8■□□□□ 0.28
SMTN-213ENST00000460658 WDR33Q9C0J8 1336 aaKnown RBP16.8■□□□□ 0.28
SMTN-213ENST00000460658 SURF6O75683 361 aaKnown RBP16.79■□□□□ 0.28
SMTN-213ENST00000460658 AFAP1Q8N556 730 aa16.79■□□□□ 0.28
SMTN-213ENST00000460658 FSD1Q9BTV5 496 aa16.79■□□□□ 0.28
SMTN-213ENST00000460658 IFT57Q9NWB7 429 aa16.79■□□□□ 0.28
SMTN-213ENST00000460658 K7ELQ4 463 aaPredicted RBP16.79■□□□□ 0.28
SMTN-213ENST00000460658 VPS53Q5VIR6 699 aa16.79■□□□□ 0.28
SMTN-213ENST00000460658 TMEM132EQ6IEE7 984 aa16.79■□□□□ 0.28
SMTN-213ENST00000460658 AKNAQ7Z591 1439 aa16.79■□□□□ 0.28
SMTN-213ENST00000460658 NEK4P51957 841 aa16.78■□□□□ 0.28
SMTN-213ENST00000460658 ERCC4Q92889 916 aaPredicted RBP16.78■□□□□ 0.28
SMTN-213ENST00000460658 FAM69CQ0P6D2 419 aa16.78■□□□□ 0.28
SMTN-213ENST00000460658 JMYQ8N9B5 988 aa16.78■□□□□ 0.28
SMTN-213ENST00000460658 TBC1D2BQ9UPU7 963 aa16.78■□□□□ 0.28
SMTN-213ENST00000460658 TRIM34Q9BYJ4 488 aa16.78■□□□□ 0.28
SMTN-213ENST00000460658 PRM3Q9NNZ6 103 aa16.78■□□□□ 0.28
SMTN-213ENST00000460658 NOB1Q9ULX3 412 aaKnown RBP16.78■□□□□ 0.28
SMTN-213ENST00000460658 KINO60870 393 aaKnown RBP16.78■□□□□ 0.28
SMTN-213ENST00000460658 PCMTD1Q96MG8 357 aaPredicted RBP16.78■□□□□ 0.28
SMTN-213ENST00000460658 AK7Q96M32 723 aa16.77■□□□□ 0.28
SMTN-213ENST00000460658 SDF4Q9BRK5 362 aa16.77■□□□□ 0.28
SMTN-213ENST00000460658 SLFN5Q08AF3 891 aa16.77■□□□□ 0.28
SMTN-213ENST00000460658 ZSCAN31Q96LW9 406 aaPredicted RBP16.77■□□□□ 0.28
SMTN-213ENST00000460658 ATF3P18847 181 aa16.76■□□□□ 0.27
SMTN-213ENST00000460658 LRRCC1Q9C099 1032 aa16.76■□□□□ 0.27
SMTN-213ENST00000460658 CYB5RLQ6IPT4 315 aa16.76■□□□□ 0.27
SMTN-213ENST00000460658 NECTIN2Q92692 538 aa16.76■□□□□ 0.27
SMTN-213ENST00000460658 IQGAP2Q13576 1575 aa16.76■□□□□ 0.27
SMTN-213ENST00000460658 FAM13BQ9NYF5 915 aa16.76■□□□□ 0.27
SMTN-213ENST00000460658 PRAM1Q96QH2 718 aa16.75■□□□□ 0.27
SMTN-213ENST00000460658 CHD1LQ86WJ1 897 aa16.75■□□□□ 0.27
SMTN-213ENST00000460658 CYP46A1Q9Y6A2 500 aa16.75■□□□□ 0.27
SMTN-213ENST00000460658 WASHC4Q2M389 1173 aa16.74■□□□□ 0.27
SMTN-213ENST00000460658 HSP90B2PQ58FF3 399 aa16.74■□□□□ 0.27
SMTN-213ENST00000460658 CAVIN1Q6NZI2 390 aaKnown RBP16.74■□□□□ 0.27
SMTN-213ENST00000460658 NEUROD6Q96NK8 337 aa16.74■□□□□ 0.27
SMTN-213ENST00000460658 RTEL1-TNFRSF6BF6WH68 1400 aa16.74■□□□□ 0.27
SMTN-213ENST00000460658 ALDH1L2Q3SY69 923 aa16.74■□□□□ 0.27
SMTN-213ENST00000460658 CC2D2AQ9P2K1 1620 aa16.73■□□□□ 0.27
SMTN-213ENST00000460658 PTPN23Q9H3S7 1636 aa16.73■□□□□ 0.27
SMTN-213ENST00000460658 DHX29Q7Z478 1369 aaKnown RBP16.73■□□□□ 0.27
SMTN-213ENST00000460658 SNAPC4Q5SXM2 1469 aa16.73■□□□□ 0.27
SMTN-213ENST00000460658 CCDC192P0DO97 292 aa16.73■□□□□ 0.27
SMTN-213ENST00000460658 TCEAL9Q9UHQ7 104 aa16.73■□□□□ 0.27
SMTN-213ENST00000460658 CDK19Q9BWU1 502 aa16.73■□□□□ 0.27
SMTN-213ENST00000460658 SLC12A5Q9H2X9 1139 aa16.73■□□□□ 0.27
SMTN-213ENST00000460658 FILIP1LQ4L180 1135 aa16.72■□□□□ 0.27
SMTN-213ENST00000460658 RUFY1Q96T51 708 aa16.72■□□□□ 0.27
SMTN-213ENST00000460658 PCF11O94913 1555 aaKnown RBP16.72■□□□□ 0.27
SMTN-213ENST00000460658 BCAR3O75815 825 aa16.72■□□□□ 0.27
SMTN-213ENST00000460658 KRT32Q14532 448 aa16.72■□□□□ 0.27
SMTN-213ENST00000460658 SMARCE1Q969G3 411 aa16.72■□□□□ 0.27
SMTN-213ENST00000460658 NLRP2Q9NX02 1062 aa16.72■□□□□ 0.27
SMTN-213ENST00000460658 SLC3A2P08195 630 aaKnown RBP16.72■□□□□ 0.27
SMTN-213ENST00000460658 DACH1Q9UI36 760 aa16.72■□□□□ 0.27
SMTN-213ENST00000460658 NSD2O96028 1365 aa16.71■□□□□ 0.27
SMTN-213ENST00000460658 TRIM5Q9C035 493 aa16.71■□□□□ 0.27
SMTN-213ENST00000460658 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.71■□□□□ 0.277e-7■■■□□ 18.5
SMTN-213ENST00000460658 HDGFL1Q5TGJ6 251 aa16.71■□□□□ 0.27
SMTN-213ENST00000460658 THEMISQ8N1K5 641 aaPredicted RBP16.71■□□□□ 0.27
SMTN-213ENST00000460658 PRPF40AO75400 957 aaKnown RBP16.7■□□□□ 0.26
SMTN-213ENST00000460658 SLC4A2P04920 1241 aa16.7■□□□□ 0.26
SMTN-213ENST00000460658 KRT85P78386 507 aa16.7■□□□□ 0.26
SMTN-213ENST00000460658 NFE2L2Q16236 605 aa16.7■□□□□ 0.26
SMTN-213ENST00000460658 MAGI1Q96QZ7 1491 aaPredicted RBP16.7■□□□□ 0.26
SMTN-213ENST00000460658 ZSCAN25Q6NSZ9 544 aa16.7■□□□□ 0.26
SMTN-213ENST00000460658 PEG3Q9GZU2 1588 aa16.7■□□□□ 0.26
SMTN-213ENST00000460658 NCOA1Q15788 1441 aa16.69■□□□□ 0.26
SMTN-213ENST00000460658 TXLNAP40222 546 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms