RNA–Protein interactions for RNA: ENST00000460627.5

CHRD-208, Transcript of chordin, humanhuman

TSL 2

Gene CHRD, Length 4,719 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-208ENST00000460627 CSPP1Q1MSJ5 1256 aa21.67■■□□□ 1.06
CHRD-208ENST00000460627 NSD2O96028 1365 aa21.66■■□□□ 1.06
CHRD-208ENST00000460627 DNTTIP2Q5QJE6 756 aaKnown RBP21.66■■□□□ 1.06
CHRD-208ENST00000460627 CCDC34Q96HJ3 373 aa21.66■■□□□ 1.06
CHRD-208ENST00000460627 TMPOP42166 694 aaKnown RBP21.65■■□□□ 1.06
CHRD-208ENST00000460627 CABP4P57796 275 aa21.65■■□□□ 1.06
CHRD-208ENST00000460627 NOL8Q76FK4 1167 aaKnown RBP21.65■■□□□ 1.06
CHRD-208ENST00000460627 ZC3H6P61129 1189 aaKnown RBP21.65■■□□□ 1.06
CHRD-208ENST00000460627 TULP1O00294 542 aaPredicted RBP21.64■■□□□ 1.05
CHRD-208ENST00000460627 NME9Q86XW9 330 aa21.64■■□□□ 1.05
CHRD-208ENST00000460627 SLC4A2P04920 1241 aa21.64■■□□□ 1.05
CHRD-208ENST00000460627 INTS3Q68E01 1043 aaKnown RBP21.63■■□□□ 1.05
CHRD-208ENST00000460627 VPS37DQ86XT2 251 aa21.62■■□□□ 1.05
CHRD-208ENST00000460627 RBM42Q9BTD8 480 aaKnown RBP21.62■■□□□ 1.05
CHRD-208ENST00000460627 NOL10Q9BSC4 688 aaKnown RBP21.62■■□□□ 1.05
CHRD-208ENST00000460627 DMRT2Q9Y5R5 561 aa21.62■■□□□ 1.05
CHRD-208ENST00000460627 CEP170Q5SW79 1584 aa21.62■■□□□ 1.05
CHRD-208ENST00000460627 CCT4P50991 539 aaKnown RBP21.62■■□□□ 1.05
CHRD-208ENST00000460627 CLASRPQ8N2M8 674 aaKnown RBP21.62■■□□□ 1.05
CHRD-208ENST00000460627 FOXO3O43524 673 aa21.61■■□□□ 1.05
CHRD-208ENST00000460627 WWC1Q8IX03 1113 aa21.61■■□□□ 1.05
CHRD-208ENST00000460627 DDX54Q8TDD1 881 aaKnown RBP21.61■■□□□ 1.05
CHRD-208ENST00000460627 RNF20Q5VTR2 975 aa21.61■■□□□ 1.05
CHRD-208ENST00000460627 ATF7IPQ6VMQ6 1270 aa21.61■■□□□ 1.05
CHRD-208ENST00000460627 RALGAPBQ86X10 1494 aa21.6■■□□□ 1.05
CHRD-208ENST00000460627 ABCC11Q96J66 1382 aa21.6■■□□□ 1.05
CHRD-208ENST00000460627 NOB1Q9ULX3 412 aaKnown RBP21.6■■□□□ 1.05
CHRD-208ENST00000460627 KIF6Q6ZMV9 814 aa21.6■■□□□ 1.05
CHRD-208ENST00000460627 CPLX2Q6PUV4 134 aaKnown RBP21.6■■□□□ 1.05
CHRD-208ENST00000460627 NUTM2BA6NNL0 878 aaPredicted RBP21.59■■□□□ 1.05
CHRD-208ENST00000460627 NUTM2EB1AL46 878 aaPredicted RBP21.59■■□□□ 1.05
CHRD-208ENST00000460627 GNAI2P04899 355 aa21.59■■□□□ 1.05
CHRD-208ENST00000460627 NUTM2AQ8IVF1 878 aaPredicted RBP21.59■■□□□ 1.05
CHRD-208ENST00000460627 SURF6O75683 361 aaKnown RBP21.59■■□□□ 1.05
CHRD-208ENST00000460627 BCAR3O75815 825 aa21.59■■□□□ 1.05
CHRD-208ENST00000460627 ANO2Q9NQ90 1003 aa21.58■■□□□ 1.05
CHRD-208ENST00000460627 TARBP1Q13395 1621 aaKnown RBP21.58■■□□□ 1.05
CHRD-208ENST00000460627 GNAT3A8MTJ3 354 aa21.58■■□□□ 1.05
CHRD-208ENST00000460627 AMOTL1Q8IY63 956 aa21.58■■□□□ 1.05
CHRD-208ENST00000460627 MAPKBP1O60336 1514 aa21.58■■□□□ 1.04
CHRD-208ENST00000460627 SLFN5Q08AF3 891 aa21.58■■□□□ 1.04
CHRD-208ENST00000460627 CADPS2Q86UW7 1296 aa21.58■■□□□ 1.04
CHRD-208ENST00000460627 SAMD9Q5K651 1589 aa21.58■■□□□ 1.04
CHRD-208ENST00000460627 FOXD4L1Q9NU39 408 aa21.57■■□□□ 1.04
CHRD-208ENST00000460627 GCC1Q96CN9 775 aa21.57■■□□□ 1.04
CHRD-208ENST00000460627 PRAG1Q86YV5 1406 aa21.57■■□□□ 1.04
CHRD-208ENST00000460627 LRPPRCP42704 1394 aaKnown RBP21.57■■□□□ 1.04
CHRD-208ENST00000460627 SRCIN1Q9C0H9 1055 aa21.57■■□□□ 1.04
CHRD-208ENST00000460627 DISP3Q9P2K9 1392 aa21.56■■□□□ 1.04
CHRD-208ENST00000460627 SYNE3Q6ZMZ3 975 aa21.56■■□□□ 1.04
CHRD-208ENST00000460627 NEUROD6Q96NK8 337 aa21.56■■□□□ 1.04
CHRD-208ENST00000460627 ATP6V1DQ9Y5K8 247 aa21.56■■□□□ 1.04
CHRD-208ENST00000460627 RIMS2Q9UQ26 1411 aa21.56■■□□□ 1.04
CHRD-208ENST00000460627 AMOTQ4VCS5 1084 aa21.55■■□□□ 1.04
CHRD-208ENST00000460627 FAM184AQ8NB25 1140 aa21.55■■□□□ 1.04
CHRD-208ENST00000460627 EMILIN1Q9Y6C2 1016 aa21.55■■□□□ 1.04
CHRD-208ENST00000460627 ERC1Q8IUD2 1116 aa21.54■■□□□ 1.04
CHRD-208ENST00000460627 RBM33Q96EV2 1170 aaKnown RBP21.54■■□□□ 1.04
CHRD-208ENST00000460627 BTBD11A6QL63 1104 aa21.54■■□□□ 1.04
CHRD-208ENST00000460627 CDC45O75419 566 aa21.54■■□□□ 1.04
CHRD-208ENST00000460627 APPP05067 770 aa21.53■■□□□ 1.04
CHRD-208ENST00000460627 TRDNQ13061 729 aa21.53■■□□□ 1.04
CHRD-208ENST00000460627 PUS7Q96PZ0 661 aaKnown RBP21.53■■□□□ 1.04
CHRD-208ENST00000460627 TTC21BQ7Z4L5 1316 aa21.53■■□□□ 1.04
CHRD-208ENST00000460627 ANKRD36BQ8N2N9 1353 aa21.53■■□□□ 1.04
CHRD-208ENST00000460627 DNMT1P26358 1616 aaKnown RBP21.52■■□□□ 1.04
CHRD-208ENST00000460627 AKAP17AQ02040 695 aaKnown RBP21.52■■□□□ 1.04
CHRD-208ENST00000460627 MVPQ14764 893 aaKnown RBP21.52■■□□□ 1.04
CHRD-208ENST00000460627 ACEP12821 1306 aa21.52■■□□□ 1.04
CHRD-208ENST00000460627 PIP4K2BP78356 416 aa21.52■■□□□ 1.04
CHRD-208ENST00000460627 ADGRL2O95490 1459 aa21.51■■□□□ 1.03
CHRD-208ENST00000460627 H3BQV1 296 aa21.51■■□□□ 1.03
CHRD-208ENST00000460627 IFFO2Q5TF58 517 aa21.51■■□□□ 1.03
CHRD-208ENST00000460627 GZF1Q9H116 711 aaPredicted RBP21.51■■□□□ 1.03
CHRD-208ENST00000460627 DRC7Q8IY82 874 aa21.51■■□□□ 1.03
CHRD-208ENST00000460627 SF3A1Q15459 793 aaKnown RBP21.51■■□□□ 1.03
CHRD-208ENST00000460627 IFT57Q9NWB7 429 aa21.51■■□□□ 1.03
CHRD-208ENST00000460627 KRT28Q7Z3Y7 464 aa21.5■■□□□ 1.03
CHRD-208ENST00000460627 DDX11L8A8MPP1 907 aa21.5■■□□□ 1.03
CHRD-208ENST00000460627 CNTROBQ8N137 903 aa21.49■■□□□ 1.03
CHRD-208ENST00000460627 PDZRN3Q9UPQ7 1066 aa21.48■■□□□ 1.03
CHRD-208ENST00000460627 TTC21AQ8NDW8 1320 aa21.48■■□□□ 1.03
CHRD-208ENST00000460627 ZMYM3Q14202 1370 aa21.48■■□□□ 1.03
CHRD-208ENST00000460627 C22orf23Q9BZE7 217 aa21.47■■□□□ 1.03
CHRD-208ENST00000460627 HMGB2P26583 209 aaKnown RBP21.47■■□□□ 1.03
CHRD-208ENST00000460627 TAF7Q15545 349 aaPredicted RBP21.46■■□□□ 1.03
CHRD-208ENST00000460627 ARHGEF12Q9NZN5 1544 aa21.46■■□□□ 1.03
CHRD-208ENST00000460627 PHF14O94880 888 aa21.46■■□□□ 1.03
CHRD-208ENST00000460627 RASSF8Q8NHQ8 419 aa21.46■■□□□ 1.03
CHRD-208ENST00000460627 TPM4P67936 248 aa21.46■■□□□ 1.03
CHRD-208ENST00000460627 C1orf115Q9H7X2 142 aa21.46■■□□□ 1.03
CHRD-208ENST00000460627 ATP10AO60312 1499 aa21.45■■□□□ 1.02
CHRD-208ENST00000460627 CPLX1O14810 134 aa21.45■■□□□ 1.02
CHRD-208ENST00000460627 MSNP26038 577 aaKnown RBP21.45■■□□□ 1.02
CHRD-208ENST00000460627 MCM10Q7L590 875 aa21.45■■□□□ 1.02
CHRD-208ENST00000460627 THUMPD2Q9BTF0 503 aaKnown RBP21.45■■□□□ 1.02
CHRD-208ENST00000460627 ATP7AQ04656 1500 aa21.45■■□□□ 1.02
CHRD-208ENST00000460627 DUSP27Q5VZP5 1158 aa21.45■■□□□ 1.02
CHRD-208ENST00000460627 ALDH1L2Q3SY69 923 aa21.44■■□□□ 1.02
CHRD-208ENST00000460627 FSD1Q9BTV5 496 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms