RNA–Protein interactions for RNA: ENST00000460227.4

MECP2-206, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 5

Gene MECP2, Length 1,298 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-206ENST00000460227 NHSL1Q5SYE7 1610 aa17.79■□□□□ 0.44
MECP2-206ENST00000460227 KTN1Q86UP2 1357 aaKnown RBP17.79■□□□□ 0.44
MECP2-206ENST00000460227 PPP4R3CPQ6ZMV5 832 aa17.78■□□□□ 0.44
MECP2-206ENST00000460227 CARD14Q9BXL6 1004 aa17.78■□□□□ 0.44
MECP2-206ENST00000460227 CCDC7Q96M83 1385 aa17.78■□□□□ 0.44
MECP2-206ENST00000460227 TOPAZ1Q8N9V7 1692 aa17.77■□□□□ 0.44
MECP2-206ENST00000460227 COL16A1Q07092 1604 aaPredicted RBP17.77■□□□□ 0.44
MECP2-206ENST00000460227 LMOD2Q6P5Q4 547 aa17.77■□□□□ 0.44
MECP2-206ENST00000460227 PANK3Q9H999 370 aa17.77■□□□□ 0.44
MECP2-206ENST00000460227 A0A1W2PP64 1363 aa17.77■□□□□ 0.43
MECP2-206ENST00000460227 PNPLA6Q8IY17 1366 aa17.77■□□□□ 0.43
MECP2-206ENST00000460227 ANKRD36BQ8N2N9 1353 aa17.77■□□□□ 0.43
MECP2-206ENST00000460227 ABTB2Q8N961 1025 aa17.76■□□□□ 0.43
MECP2-206ENST00000460227 PHLPP1O60346 1717 aa17.75■□□□□ 0.43
MECP2-206ENST00000460227 SPATA31A6Q5VVP1 1343 aa17.75■□□□□ 0.43
MECP2-206ENST00000460227 TNS3Q68CZ2 1445 aa17.75■□□□□ 0.43
MECP2-206ENST00000460227 ARHGEF10O15013 1369 aa17.75■□□□□ 0.43
MECP2-206ENST00000460227 TTC21AQ8NDW8 1320 aa17.74■□□□□ 0.43
MECP2-206ENST00000460227 ITSN1Q15811 1721 aa17.73■□□□□ 0.43
MECP2-206ENST00000460227 NLRP13Q86W25 1043 aa17.73■□□□□ 0.43
MECP2-206ENST00000460227 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.73■□□□□ 0.436e-7■■■■□ 21.1
MECP2-206ENST00000460227 NLRP6P59044 892 aa17.72■□□□□ 0.43
MECP2-206ENST00000460227 NUTM2GQ5VZR2 741 aa17.72■□□□□ 0.43
MECP2-206ENST00000460227 CABLES1Q8TDN4 633 aa17.72■□□□□ 0.43
MECP2-206ENST00000460227 EDC4Q6P2E9 1401 aaKnown RBP17.72■□□□□ 0.43
MECP2-206ENST00000460227 FYB1O15117 783 aa17.71■□□□□ 0.43
MECP2-206ENST00000460227 HOXD11P31277 338 aaPredicted RBP17.71■□□□□ 0.43
MECP2-206ENST00000460227 NUTM2BA6NNL0 878 aaPredicted RBP17.7■□□□□ 0.42
MECP2-206ENST00000460227 NUTM2EB1AL46 878 aaPredicted RBP17.7■□□□□ 0.42
MECP2-206ENST00000460227 PER1O15534 1290 aaPredicted RBP17.7■□□□□ 0.42
MECP2-206ENST00000460227 NME9Q86XW9 330 aa17.7■□□□□ 0.42
MECP2-206ENST00000460227 NUTM2AQ8IVF1 878 aaPredicted RBP17.7■□□□□ 0.42
MECP2-206ENST00000460227 ZRANB1Q9UGI0 708 aa17.7■□□□□ 0.42
MECP2-206ENST00000460227 USP31Q70CQ4 1352 aa17.68■□□□□ 0.42
MECP2-206ENST00000460227 TRPM3Q9HCF6 1732 aaPredicted RBP17.67■□□□□ 0.42
MECP2-206ENST00000460227 ZNF316A6NFI3 1004 aaPredicted RBP17.67■□□□□ 0.42
MECP2-206ENST00000460227 PLEKHG5O94827 1062 aa17.67■□□□□ 0.42
MECP2-206ENST00000460227 GCP02774 474 aa17.67■□□□□ 0.42
MECP2-206ENST00000460227 USP19O94966 1318 aa17.67■□□□□ 0.42
MECP2-206ENST00000460227 ADAMTS2O95450 1211 aa17.65■□□□□ 0.42
MECP2-206ENST00000460227 RNF39Q9H2S5 420 aa17.65■□□□□ 0.42
MECP2-206ENST00000460227 NSD3Q9BZ95 1437 aa17.64■□□□□ 0.42
MECP2-206ENST00000460227 GGNBP2Q9H3C7 697 aa17.64■□□□□ 0.41
MECP2-206ENST00000460227 KNSTRNQ9Y448 316 aa17.64■□□□□ 0.41
MECP2-206ENST00000460227 FAM83GA6ND36 823 aa17.63■□□□□ 0.41
MECP2-206ENST00000460227 HAP1P54257 671 aaPredicted RBP17.63■□□□□ 0.41
MECP2-206ENST00000460227 KCNH5Q8NCM2 988 aa17.63■□□□□ 0.41
MECP2-206ENST00000460227 COG3Q96JB2 828 aa17.63■□□□□ 0.41
MECP2-206ENST00000460227 CGNL1Q0VF96 1302 aa17.63■□□□□ 0.41
MECP2-206ENST00000460227 SHPRHQ149N8 1683 aa17.62■□□□□ 0.41
MECP2-206ENST00000460227 ALS2Q96Q42 1657 aa17.62■□□□□ 0.41
MECP2-206ENST00000460227 AKAP12Q02952 1782 aa17.62■□□□□ 0.41
MECP2-206ENST00000460227 AMER1Q5JTC6 1135 aaPredicted RBP17.62■□□□□ 0.41
MECP2-206ENST00000460227 COL22A1Q8NFW1 1626 aaPredicted RBP17.61■□□□□ 0.41
MECP2-206ENST00000460227 ZC3H6P61129 1189 aaKnown RBP17.61■□□□□ 0.41
MECP2-206ENST00000460227 LRP6O75581 1613 aa17.61■□□□□ 0.41
MECP2-206ENST00000460227 MYOM1P52179 1685 aa17.61■□□□□ 0.41
MECP2-206ENST00000460227 DDX10Q13206 875 aaKnown RBP17.6■□□□□ 0.41
MECP2-206ENST00000460227 MEX3CQ5U5Q3 659 aaKnown RBP17.6■□□□□ 0.41
MECP2-206ENST00000460227 ILDR2Q71H61 639 aa17.6■□□□□ 0.41
MECP2-206ENST00000460227 FNBP4Q8N3X1 1017 aaPredicted RBP17.6■□□□□ 0.41
MECP2-206ENST00000460227 MED1Q15648 1581 aaPredicted RBP17.6■□□□□ 0.41
MECP2-206ENST00000460227 MON2Q7Z3U7 1717 aa17.59■□□□□ 0.41
MECP2-206ENST00000460227 ARHGEF25Q86VW2 580 aa17.59■□□□□ 0.41
MECP2-206ENST00000460227 NGLY1Q96IV0 654 aa17.59■□□□□ 0.41
MECP2-206ENST00000460227 NRKQ7Z2Y5 1582 aa17.58■□□□□ 0.41
MECP2-206ENST00000460227 OVOS2A0A0J9YW53 1432 aa17.58■□□□□ 0.41
MECP2-206ENST00000460227 OVOS2Q6IE36 1432 aa17.58■□□□□ 0.41
MECP2-206ENST00000460227 C8orf37Q96NL8 207 aa17.58■□□□□ 0.4
MECP2-206ENST00000460227 CPDO75976 1380 aa17.57■□□□□ 0.4
MECP2-206ENST00000460227 FBLN1P23142 703 aa17.57■□□□□ 0.4
MECP2-206ENST00000460227 KIAA0232Q92628 1395 aa17.56■□□□□ 0.4
MECP2-206ENST00000460227 SOX12O15370 315 aa17.56■□□□□ 0.4
MECP2-206ENST00000460227 PRDM11Q9NQV5 511 aa17.56■□□□□ 0.4
MECP2-206ENST00000460227 RGS17Q9UGC6 210 aaPredicted RBP17.56■□□□□ 0.4
MECP2-206ENST00000460227 PIK3C2AO00443 1686 aa17.55■□□□□ 0.4
MECP2-206ENST00000460227 CHRNA2Q15822 529 aa17.55■□□□□ 0.4
MECP2-206ENST00000460227 SLIT3O75094 1523 aa17.55■□□□□ 0.4
MECP2-206ENST00000460227 NPC1L1Q9UHC9 1359 aa17.54■□□□□ 0.4
MECP2-206ENST00000460227 MORC1Q86VD1 984 aa17.54■□□□□ 0.4
MECP2-206ENST00000460227 NSD2O96028 1365 aa17.53■□□□□ 0.4
MECP2-206ENST00000460227 AFF2P51816 1311 aa17.53■□□□□ 0.4
MECP2-206ENST00000460227 AXIN2Q9Y2T1 843 aa17.53■□□□□ 0.4
MECP2-206ENST00000460227 CC2D1BQ5T0F9 858 aaKnown RBP17.52■□□□□ 0.4
MECP2-206ENST00000460227 BTG4Q9NY30 223 aa17.52■□□□□ 0.4
MECP2-206ENST00000460227 USP21Q9UK80 565 aa17.52■□□□□ 0.4
MECP2-206ENST00000460227 AATKQ6ZMQ8 1374 aa17.52■□□□□ 0.39
MECP2-206ENST00000460227 ZNF772Q68DY9 489 aaPredicted RBP17.51■□□□□ 0.39
MECP2-206ENST00000460227 UNC5CLQ8IV45 518 aa17.51■□□□□ 0.39
MECP2-206ENST00000460227 IP6K1Q92551 441 aa17.51■□□□□ 0.39
MECP2-206ENST00000460227 MAP3K19Q56UN5 1328 aa17.5■□□□□ 0.39
MECP2-206ENST00000460227 RRS1Q15050 365 aaKnown RBP17.5■□□□□ 0.39
MECP2-206ENST00000460227 QTRT2Q9H974 415 aaKnown RBP17.5■□□□□ 0.39
MECP2-206ENST00000460227 POLKQ9UBT6 870 aa17.5■□□□□ 0.39
MECP2-206ENST00000460227 SLIT2O94813 1529 aa17.5■□□□□ 0.39
MECP2-206ENST00000460227 BCL9LQ86UU0 1499 aa17.5■□□□□ 0.39
MECP2-206ENST00000460227 NFAT5O94916 1531 aa17.49■□□□□ 0.39
MECP2-206ENST00000460227 ZBTB7CA1YPR0 619 aa17.49■□□□□ 0.39
MECP2-206ENST00000460227 TNNT2P45379 298 aaPredicted RBP17.49■□□□□ 0.39
MECP2-206ENST00000460227 CNKSR2Q8WXI2 1034 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms