RNA–Protein interactions for RNA: ENST00000460215.5

SCMH1-212, Transcript of Scm polycomb group protein homolog 1, humanhuman

TSL 3

Gene SCMH1, Length 447 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCMH1-212ENST00000460215 PDE3BQ13370 1112 aa13.02□□□□□ -0.33
SCMH1-212ENST00000460215 PRDM11Q9NQV5 511 aa13.02□□□□□ -0.33
SCMH1-212ENST00000460215 MYOM1P52179 1685 aa13.02□□□□□ -0.33
SCMH1-212ENST00000460215 ABCC11Q96J66 1382 aa13.01□□□□□ -0.33
SCMH1-212ENST00000460215 PPLO60437 1756 aa13□□□□□ -0.33
SCMH1-212ENST00000460215 IFT172Q9UG01 1749 aa13□□□□□ -0.33
SCMH1-212ENST00000460215 ZBTB7AO95365 584 aa13□□□□□ -0.33
SCMH1-212ENST00000460215 ANO8Q9HCE9 1232 aaPredicted RBP13□□□□□ -0.33
SCMH1-212ENST00000460215 CHD4Q14839 1912 aa13□□□□□ -0.33
SCMH1-212ENST00000460215 CASZ1Q86V15 1759 aa12.99□□□□□ -0.33
SCMH1-212ENST00000460215 KNDC1Q76NI1 1749 aa12.99□□□□□ -0.33
SCMH1-212ENST00000460215 FHDC1Q9C0D6 1143 aaPredicted RBP12.99□□□□□ -0.33
SCMH1-212ENST00000460215 STRN4Q9NRL3 753 aa12.99□□□□□ -0.33
SCMH1-212ENST00000460215 RGPD8O14715 1765 aaPredicted RBP12.99□□□□□ -0.33
SCMH1-212ENST00000460215 PTGER2P43116 358 aa12.98□□□□□ -0.33
SCMH1-212ENST00000460215 PMFBP1Q8TBY8 1022 aa12.98□□□□□ -0.33
SCMH1-212ENST00000460215 SYT17Q9BSW7 474 aa12.98□□□□□ -0.33
SCMH1-212ENST00000460215 PDGFDQ9GZP0 370 aaPredicted RBP12.98□□□□□ -0.33
SCMH1-212ENST00000460215 USP35Q9P2H5 1018 aa12.98□□□□□ -0.33
SCMH1-212ENST00000460215 ADGRF5Q8IZF2 1346 aa12.97□□□□□ -0.33
SCMH1-212ENST00000460215 TMEM132EQ6IEE7 984 aa12.97□□□□□ -0.33
SCMH1-212ENST00000460215 PPARGC1BQ86YN6 1023 aaKnown RBP12.97□□□□□ -0.33
SCMH1-212ENST00000460215 TRPM3Q9HCF6 1732 aaPredicted RBP12.96□□□□□ -0.33
SCMH1-212ENST00000460215 ITGAEP38570 1179 aa12.96□□□□□ -0.33
SCMH1-212ENST00000460215 ATF5Q9Y2D1 282 aaPredicted RBP12.96□□□□□ -0.33
SCMH1-212ENST00000460215 YTHDC2Q9H6S0 1430 aaKnown RBP12.96□□□□□ -0.34
SCMH1-212ENST00000460215 ALS2Q96Q42 1657 aa12.96□□□□□ -0.34
SCMH1-212ENST00000460215 GPRASP1Q5JY77 1395 aa12.95□□□□□ -0.34
SCMH1-212ENST00000460215 DLC1Q96QB1 1528 aa12.95□□□□□ -0.34
SCMH1-212ENST00000460215 CHRNA2Q15822 529 aa12.95□□□□□ -0.34
SCMH1-212ENST00000460215 BARGINQ6ZT62 677 aa12.95□□□□□ -0.34
SCMH1-212ENST00000460215 KIAA0232Q92628 1395 aa12.94□□□□□ -0.34
SCMH1-212ENST00000460215 BCL11BQ9C0K0 894 aaPredicted RBP12.94□□□□□ -0.34
SCMH1-212ENST00000460215 ANKARQ7Z5J8 1434 aa12.94□□□□□ -0.34
SCMH1-212ENST00000460215 CRYBG1Q9Y4K1 1723 aa12.93□□□□□ -0.34
SCMH1-212ENST00000460215 RGPD3A6NKT7 1758 aaPredicted RBP12.93□□□□□ -0.34
SCMH1-212ENST00000460215 RGPD4Q7Z3J3 1758 aa12.93□□□□□ -0.34
SCMH1-212ENST00000460215 ACIN1Q9UKV3 1341 aaKnown RBP12.92□□□□□ -0.34
SCMH1-212ENST00000460215 SAFB2Q14151 953 aaKnown RBP eCLIP12.92□□□□□ -0.34
SCMH1-212ENST00000460215 SSH2Q76I76 1423 aa12.92□□□□□ -0.34
SCMH1-212ENST00000460215 PAK3O75914 559 aaPredicted RBP12.91□□□□□ -0.34
SCMH1-212ENST00000460215 TCP11L2Q8N4U5 519 aa12.91□□□□□ -0.34
SCMH1-212ENST00000460215 OVOS2A0A0G2JMS6 1433 aa12.9□□□□□ -0.34
SCMH1-212ENST00000460215 OVOS2A0A0J9YW53 1432 aa12.9□□□□□ -0.34
SCMH1-212ENST00000460215 OVOS2Q6IE36 1432 aa12.9□□□□□ -0.34
SCMH1-212ENST00000460215 C11orf95C9JLR9 678 aaPredicted RBP12.9□□□□□ -0.34
SCMH1-212ENST00000460215 PLSCR1O15162 318 aa12.9□□□□□ -0.34
SCMH1-212ENST00000460215 EVA1CP58658 441 aa12.9□□□□□ -0.34
SCMH1-212ENST00000460215 GPR162Q16538 588 aa12.9□□□□□ -0.34
SCMH1-212ENST00000460215 SIRT1Q96EB6 747 aa12.9□□□□□ -0.34
SCMH1-212ENST00000460215 PIK3C2GO75747 1445 aa12.89□□□□□ -0.35
SCMH1-212ENST00000460215 PRAM1Q96QH2 718 aa12.89□□□□□ -0.35
SCMH1-212ENST00000460215 MTFR1LQ9H019 292 aa12.89□□□□□ -0.35
SCMH1-212ENST00000460215 ANKRD30BQ9BXX2 1392 aa12.89□□□□□ -0.35
SCMH1-212ENST00000460215 ZC3H6P61129 1189 aaKnown RBP12.88□□□□□ -0.35
SCMH1-212ENST00000460215 LARP1Q6PKG0 1096 aaKnown RBP12.88□□□□□ -0.35
SCMH1-212ENST00000460215 SGIP1Q9BQI5 828 aa12.88□□□□□ -0.35
SCMH1-212ENST00000460215 STK32BQ9NY57 414 aa12.88□□□□□ -0.35
SCMH1-212ENST00000460215 MAP3K5Q99683 1374 aa12.88□□□□□ -0.35
SCMH1-212ENST00000460215 SHANK3Q9BYB0 1731 aa12.88□□□□□ -0.35
SCMH1-212ENST00000460215 RGL3Q3MIN7 710 aa12.87□□□□□ -0.35
SCMH1-212ENST00000460215 ARXQ96QS3 562 aa12.87□□□□□ -0.35
SCMH1-212ENST00000460215 PARP4Q9UKK3 1724 aaKnown RBP12.86□□□□□ -0.35
SCMH1-212ENST00000460215 NGDNQ8NEJ9 315 aaKnown RBP12.86□□□□□ -0.35
SCMH1-212ENST00000460215 PHRF1Q9P1Y6 1649 aaKnown RBP12.86□□□□□ -0.35
SCMH1-212ENST00000460215 PEAK1Q9H792 1746 aa12.85□□□□□ -0.35
SCMH1-212ENST00000460215 DHX57Q6P158 1386 aaKnown RBP12.85□□□□□ -0.35
SCMH1-212ENST00000460215 PTF1AQ7RTS3 328 aa12.85□□□□□ -0.35
SCMH1-212ENST00000460215 PELP1Q8IZL8 1130 aaKnown RBP12.85□□□□□ -0.35
SCMH1-212ENST00000460215 PROM2Q8N271 834 aa12.85□□□□□ -0.35
SCMH1-212ENST00000460215 POGKQ9P215 609 aa12.85□□□□□ -0.35
SCMH1-212ENST00000460215 THRAP3Q9Y2W1 955 aaKnown RBP12.85□□□□□ -0.35
SCMH1-212ENST00000460215 PRR36Q9H6K5 1346 aa12.85□□□□□ -0.35
SCMH1-212ENST00000460215 EIF3AQ14152 1382 aaKnown RBP12.84□□□□□ -0.35
SCMH1-212ENST00000460215 SLC15A2Q16348 729 aa12.84□□□□□ -0.35
SCMH1-212ENST00000460215 SPATA31E1Q6ZUB1 1445 aa12.83□□□□□ -0.36
SCMH1-212ENST00000460215 HSPA6P17066 643 aa12.83□□□□□ -0.36
SCMH1-212ENST00000460215 NUTM2GQ5VZR2 741 aa12.83□□□□□ -0.36
SCMH1-212ENST00000460215 HIRIP3Q9BW71 556 aaPredicted RBP12.83□□□□□ -0.36
SCMH1-212ENST00000460215 SLC4A1APQ9BWU0 796 aaKnown RBP12.83□□□□□ -0.36
SCMH1-212ENST00000460215 ATP7BP35670 1465 aa12.83□□□□□ -0.36
SCMH1-212ENST00000460215 TULP4Q9NRJ4 1543 aa12.83□□□□□ -0.36
SCMH1-212ENST00000460215 TXNRD1Q16881 649 aa12.82□□□□□ -0.36
SCMH1-212ENST00000460215 KLHL34Q8N239 644 aa12.82□□□□□ -0.36
SCMH1-212ENST00000460215 SBF2Q86WG5 1849 aa12.81□□□□□ -0.36
SCMH1-212ENST00000460215 C14orf93Q9H972 538 aaKnown RBP12.81□□□□□ -0.36
SCMH1-212ENST00000460215 LRRC37A3O60309 1634 aa12.8□□□□□ -0.36
SCMH1-212ENST00000460215 LMO7Q8WWI1 1683 aa12.8□□□□□ -0.36
SCMH1-212ENST00000460215 ATP10DQ9P241 1426 aa12.79□□□□□ -0.36
SCMH1-212ENST00000460215 DDB1Q16531 1140 aa12.79□□□□□ -0.36
SCMH1-212ENST00000460215 CFAP70Q5T0N1 1121 aa12.79□□□□□ -0.36
SCMH1-212ENST00000460215 GOLGB1Q14789 3259 aaKnown RBP12.79□□□□□ -0.36
SCMH1-212ENST00000460215 MINK1Q8N4C8 1332 aaPredicted RBP12.79□□□□□ -0.36
SCMH1-212ENST00000460215 CPDO75976 1380 aa12.79□□□□□ -0.36
SCMH1-212ENST00000460215 CRB1P82279 1406 aa12.79□□□□□ -0.36
SCMH1-212ENST00000460215 COL5A2P05997 1499 aaPredicted RBP12.78□□□□□ -0.36
SCMH1-212ENST00000460215 GPBP1L1Q9HC44 474 aaPredicted RBP12.77□□□□□ -0.37
SCMH1-212ENST00000460215 WASLO00401 505 aaPredicted RBP12.76□□□□□ -0.37
SCMH1-212ENST00000460215 AATKQ6ZMQ8 1374 aa12.76□□□□□ -0.37
SCMH1-212ENST00000460215 BCL9O00512 1426 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms