RNA–Protein interactions for RNA: ENST00000459947.5

UBR4-208, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 3,873 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-208ENST00000459947 DDX17Q92841 729 aaKnown RBP14.87□□□□□ -0.03
UBR4-208ENST00000459947 KTN1Q86UP2 1357 aaKnown RBP14.87□□□□□ -0.03
UBR4-208ENST00000459947 NLRP13Q86W25 1043 aa14.87□□□□□ -0.03
UBR4-208ENST00000459947 MARF1Q9Y4F3 1742 aaKnown RBP14.86□□□□□ -0.03
UBR4-208ENST00000459947 ANKRD36BQ8N2N9 1353 aa14.86□□□□□ -0.03
UBR4-208ENST00000459947 TMC1Q8TDI8 760 aa14.86□□□□□ -0.03
UBR4-208ENST00000459947 ZNF772Q68DY9 489 aaPredicted RBP14.85□□□□□ -0.03
UBR4-208ENST00000459947 DISP3Q9P2K9 1392 aa14.85□□□□□ -0.03
UBR4-208ENST00000459947 PAK3O75914 559 aaPredicted RBP14.85□□□□□ -0.03
UBR4-208ENST00000459947 NRKQ7Z2Y5 1582 aa14.85□□□□□ -0.03
UBR4-208ENST00000459947 XPCQ01831 940 aaPredicted RBP14.85□□□□□ -0.03
UBR4-208ENST00000459947 USP54Q70EL1 1684 aa14.84□□□□□ -0.03
UBR4-208ENST00000459947 ABCA3Q99758 1704 aa14.84□□□□□ -0.03
UBR4-208ENST00000459947 SSH2Q76I76 1423 aa14.84□□□□□ -0.03
UBR4-208ENST00000459947 LMOD2Q6P5Q4 547 aa14.84□□□□□ -0.03
UBR4-208ENST00000459947 LRP6O75581 1613 aa14.83□□□□□ -0.04
UBR4-208ENST00000459947 TTC21BQ7Z4L5 1316 aa14.83□□□□□ -0.04
UBR4-208ENST00000459947 NUTM2BA6NNL0 878 aaPredicted RBP14.82□□□□□ -0.04
UBR4-208ENST00000459947 NUTM2EB1AL46 878 aaPredicted RBP14.82□□□□□ -0.04
UBR4-208ENST00000459947 NUTM2AQ8IVF1 878 aaPredicted RBP14.82□□□□□ -0.04
UBR4-208ENST00000459947 USP31Q70CQ4 1352 aa14.82□□□□□ -0.04
UBR4-208ENST00000459947 USP19O94966 1318 aa14.82□□□□□ -0.04
UBR4-208ENST00000459947 ABTB2Q8N961 1025 aa14.82□□□□□ -0.04
UBR4-208ENST00000459947 PHRF1Q9P1Y6 1649 aaKnown RBP14.81□□□□□ -0.04
UBR4-208ENST00000459947 CRYBG1Q9Y4K1 1723 aa14.81□□□□□ -0.04
UBR4-208ENST00000459947 KCNH5Q8NCM2 988 aa14.81□□□□□ -0.04
UBR4-208ENST00000459947 ABCC6O95255 1503 aa14.81□□□□□ -0.04
UBR4-208ENST00000459947 COL14A1Q05707 1796 aaKnown RBP14.8□□□□□ -0.04
UBR4-208ENST00000459947 NWD2Q9ULI1 1742 aa14.8□□□□□ -0.04
UBR4-208ENST00000459947 SLIT3O75094 1523 aa14.8□□□□□ -0.04
UBR4-208ENST00000459947 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.8□□□□□ -0.04
UBR4-208ENST00000459947 CD163L1Q9NR16 1453 aa14.8□□□□□ -0.04
UBR4-208ENST00000459947 A0A1W2PP64 1363 aa14.8□□□□□ -0.04
UBR4-208ENST00000459947 SLC12A5Q9H2X9 1139 aa14.79□□□□□ -0.04
UBR4-208ENST00000459947 CPDO75976 1380 aa14.79□□□□□ -0.04
UBR4-208ENST00000459947 MYOM1P52179 1685 aa14.78□□□□□ -0.04
UBR4-208ENST00000459947 NGLY1Q96IV0 654 aa14.78□□□□□ -0.04
UBR4-208ENST00000459947 PIK3C2AO00443 1686 aa14.77□□□□□ -0.04
UBR4-208ENST00000459947 NLRP6P59044 892 aa14.77□□□□□ -0.04
UBR4-208ENST00000459947 FNBP4Q8N3X1 1017 aaPredicted RBP14.77□□□□□ -0.05
UBR4-208ENST00000459947 AFF2P51816 1311 aa14.76□□□□□ -0.05
UBR4-208ENST00000459947 NSD2O96028 1365 aa14.76□□□□□ -0.05
UBR4-208ENST00000459947 CGNL1Q0VF96 1302 aa14.75□□□□□ -0.05
UBR4-208ENST00000459947 ADAMTS2O95450 1211 aa14.75□□□□□ -0.05
UBR4-208ENST00000459947 C8orf37Q96NL8 207 aa14.75□□□□□ -0.05
UBR4-208ENST00000459947 SLIT2O94813 1529 aa14.75□□□□□ -0.05
UBR4-208ENST00000459947 TRPC5Q9UL62 973 aaPredicted RBP14.75□□□□□ -0.05
UBR4-208ENST00000459947 CDK12Q9NYV4 1490 aaPredicted RBP14.75□□□□□ -0.05
UBR4-208ENST00000459947 KIF20BQ96Q89 1820 aa14.74□□□□□ -0.05
UBR4-208ENST00000459947 PRDM11Q9NQV5 511 aa14.74□□□□□ -0.05
UBR4-208ENST00000459947 PLCH1Q4KWH8 1693 aa14.73□□□□□ -0.05
UBR4-208ENST00000459947 COG3Q96JB2 828 aa14.73□□□□□ -0.05
UBR4-208ENST00000459947 OVOS2A0A0J9YW53 1432 aa14.73□□□□□ -0.05
UBR4-208ENST00000459947 OVOS2Q6IE36 1432 aa14.73□□□□□ -0.05
UBR4-208ENST00000459947 USP21Q9UK80 565 aa14.72□□□□□ -0.05
UBR4-208ENST00000459947 GCP02774 474 aa14.72□□□□□ -0.05
UBR4-208ENST00000459947 ATRNO75882 1429 aa14.72□□□□□ -0.05
UBR4-208ENST00000459947 UNC5CLQ8IV45 518 aa14.71□□□□□ -0.05
UBR4-208ENST00000459947 POLR3GLQ9BT43 218 aa14.71□□□□□ -0.05
UBR4-208ENST00000459947 AATKQ6ZMQ8 1374 aa14.71□□□□□ -0.05
UBR4-208ENST00000459947 CCDC7Q96M83 1385 aa14.71□□□□□ -0.05
UBR4-208ENST00000459947 NSD3Q9BZ95 1437 aa14.71□□□□□ -0.05
UBR4-208ENST00000459947 KIF7Q2M1P5 1343 aa14.71□□□□□ -0.06
UBR4-208ENST00000459947 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.7□□□□□ -0.06
UBR4-208ENST00000459947 KIF24Q5T7B8 1368 aa14.7□□□□□ -0.06
UBR4-208ENST00000459947 RBM6P78332 1123 aaKnown RBP14.7□□□□□ -0.06
UBR4-208ENST00000459947 CABLES1Q8TDN4 633 aa14.69□□□□□ -0.06
UBR4-208ENST00000459947 ANKRD26Q9UPS8 1709 aa14.69□□□□□ -0.06
UBR4-208ENST00000459947 KIAA0232Q92628 1395 aa14.69□□□□□ -0.06
UBR4-208ENST00000459947 NFAT5O94916 1531 aa14.69□□□□□ -0.06
UBR4-208ENST00000459947 NRAPQ86VF7 1730 aa14.69□□□□□ -0.06
UBR4-208ENST00000459947 VPS72Q15906 364 aa14.68□□□□□ -0.06
UBR4-208ENST00000459947 RTL1A6NKG5 1358 aa14.68□□□□□ -0.06
UBR4-208ENST00000459947 RXRBP28702 533 aa14.68□□□□□ -0.06
UBR4-208ENST00000459947 NME9Q86XW9 330 aa14.68□□□□□ -0.06
UBR4-208ENST00000459947 NUTM2GQ5VZR2 741 aa14.67□□□□□ -0.06
UBR4-208ENST00000459947 KNSTRNQ9Y448 316 aa14.67□□□□□ -0.06
UBR4-208ENST00000459947 LMO7Q8WWI1 1683 aa14.67□□□□□ -0.06
UBR4-208ENST00000459947 QTRT2Q9H974 415 aaKnown RBP14.67□□□□□ -0.06
UBR4-208ENST00000459947 BCL9LQ86UU0 1499 aa14.67□□□□□ -0.06
UBR4-208ENST00000459947 NPC1L1Q9UHC9 1359 aa14.66□□□□□ -0.06
UBR4-208ENST00000459947 ARHGEF25Q86VW2 580 aa14.66□□□□□ -0.06
UBR4-208ENST00000459947 BLMP54132 1417 aaPredicted RBP14.66□□□□□ -0.06
UBR4-208ENST00000459947 FAM83GA6ND36 823 aa14.66□□□□□ -0.06
UBR4-208ENST00000459947 PANK3Q9H999 370 aa14.65□□□□□ -0.06
UBR4-208ENST00000459947 RGS17Q9UGC6 210 aaPredicted RBP14.65□□□□□ -0.06
UBR4-208ENST00000459947 ZC3H6P61129 1189 aaKnown RBP14.65□□□□□ -0.06
UBR4-208ENST00000459947 FAM208AQ9UK61 1670 aaKnown RBP14.64□□□□□ -0.07
UBR4-208ENST00000459947 FYB1O15117 783 aa14.64□□□□□ -0.07
UBR4-208ENST00000459947 EVA1CP58658 441 aa14.64□□□□□ -0.07
UBR4-208ENST00000459947 BTG4Q9NY30 223 aa14.64□□□□□ -0.07
UBR4-208ENST00000459947 WASHC2AQ641Q2 1341 aa14.64□□□□□ -0.07
UBR4-208ENST00000459947 THRAP3Q9Y2W1 955 aaKnown RBP14.63□□□□□ -0.07
UBR4-208ENST00000459947 POTEAQ6S8J7 498 aa14.63□□□□□ -0.07
UBR4-208ENST00000459947 GJD4Q96KN9 370 aaPredicted RBP14.63□□□□□ -0.07
UBR4-208ENST00000459947 COL18A1P39060 1754 aa14.63□□□□□ -0.07
UBR4-208ENST00000459947 PLEKHG5O94827 1062 aa14.62□□□□□ -0.07
UBR4-208ENST00000459947 CDCA7Q9BWT1 371 aaPredicted RBP14.62□□□□□ -0.07
UBR4-208ENST00000459947 CARD14Q9BXL6 1004 aa14.62□□□□□ -0.07
UBR4-208ENST00000459947 LTN1O94822 1766 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms