RNA–Protein interactions for RNA: ENST00000454849.5

MSH2-203, Transcript of mutS homolog 2, humanhuman

TSL 4

Gene MSH2, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-203ENST00000454849 ALS2Q96Q42 1657 aa35.19■■■■□ 3.22
MSH2-203ENST00000454849 ST20-MTHFSA0A0A6YYL1 179 aa35.17■■■■□ 3.22
MSH2-203ENST00000454849 MARF1Q9Y4F3 1742 aaKnown RBP35.16■■■■□ 3.22
MSH2-203ENST00000454849 FAM83GA6ND36 823 aa35.15■■■■□ 3.22
MSH2-203ENST00000454849 BCL9LQ86UU0 1499 aa35.15■■■■□ 3.22
MSH2-203ENST00000454849 RBM6P78332 1123 aaKnown RBP35.14■■■■□ 3.22
MSH2-203ENST00000454849 TRPC5Q9UL62 973 aaPredicted RBP35.14■■■■□ 3.22
MSH2-203ENST00000454849 ABTB2Q8N961 1025 aa35.13■■■■□ 3.21
MSH2-203ENST00000454849 ABCA3Q99758 1704 aa35.12■■■■□ 3.21
MSH2-203ENST00000454849 TIMELESSQ9UNS1 1208 aa35.12■■■■□ 3.21
MSH2-203ENST00000454849 SBNO2Q9Y2G9 1366 aa35.1■■■■□ 3.21
MSH2-203ENST00000454849 UNC5CLQ8IV45 518 aa35.09■■■■□ 3.21
MSH2-203ENST00000454849 ATRNO75882 1429 aa35.08■■■■□ 3.21
MSH2-203ENST00000454849 TMC1Q8TDI8 760 aa35.08■■■■□ 3.21
MSH2-203ENST00000454849 TESK2Q96S53 571 aa35.08■■■■□ 3.21
MSH2-203ENST00000454849 SLIT2O94813 1529 aa35.06■■■■□ 3.2
MSH2-203ENST00000454849 ATAD2Q6PL18 1390 aa35.06■■■■□ 3.2
MSH2-203ENST00000454849 USP6P35125 1406 aa35.06■■■■□ 3.2
MSH2-203ENST00000454849 ZC3H6P61129 1189 aaKnown RBP35.05■■■■□ 3.2
MSH2-203ENST00000454849 USP47Q96K76 1375 aa35.04■■■■□ 3.2
MSH2-203ENST00000454849 CHRNA2Q15822 529 aa35.03■■■■□ 3.2
MSH2-203ENST00000454849 RGS12O14924 1447 aa35.02■■■■□ 3.2
MSH2-203ENST00000454849 SLC12A5Q9H2X9 1139 aa35.02■■■■□ 3.2
MSH2-203ENST00000454849 PRDM11Q9NQV5 511 aa35.02■■■■□ 3.2
MSH2-203ENST00000454849 GJD4Q96KN9 370 aaPredicted RBP35.01■■■■□ 3.2
MSH2-203ENST00000454849 BTG4Q9NY30 223 aa35.01■■■■□ 3.2
MSH2-203ENST00000454849 CCDC9Q9Y3X0 531 aaKnown RBP35■■■■□ 3.19
MSH2-203ENST00000454849 CRYBG1Q9Y4K1 1723 aa34.99■■■■□ 3.19
MSH2-203ENST00000454849 NLRP6P59044 892 aa34.99■■■■□ 3.19
MSH2-203ENST00000454849 KIAA0232Q92628 1395 aa34.99■■■■□ 3.19
MSH2-203ENST00000454849 NLRP13Q86W25 1043 aa34.98■■■■□ 3.19
MSH2-203ENST00000454849 ZNF692Q9BU19 519 aaPredicted RBP34.98■■■■□ 3.19
MSH2-203ENST00000454849 PLCH1Q4KWH8 1693 aa34.97■■■■□ 3.19
MSH2-203ENST00000454849 CDK12Q9NYV4 1490 aaPredicted RBP34.97■■■■□ 3.19
MSH2-203ENST00000454849 TTC21BQ7Z4L5 1316 aa34.96■■■■□ 3.19
MSH2-203ENST00000454849 KTN1Q86UP2 1357 aaKnown RBP34.96■■■■□ 3.19
MSH2-203ENST00000454849 SSH2Q76I76 1423 aa34.95■■■■□ 3.19
MSH2-203ENST00000454849 SUGP2Q8IX01 1082 aaKnown RBP eCLIP34.94■■■■□ 3.18
MSH2-203ENST00000454849 CPSF1Q10570 1443 aaKnown RBP34.94■■■■□ 3.18
MSH2-203ENST00000454849 PHRF1Q9P1Y6 1649 aaKnown RBP34.93■■■■□ 3.18
MSH2-203ENST00000454849 USP19O94966 1318 aa34.93■■■■□ 3.18
MSH2-203ENST00000454849 ZBTB7CA1YPR0 619 aa34.93■■■■□ 3.18
MSH2-203ENST00000454849 VPS72Q15906 364 aa34.93■■■■□ 3.18
MSH2-203ENST00000454849 BRD4O60885 1362 aaPredicted RBP34.92■■■■□ 3.18
MSH2-203ENST00000454849 GCP02774 474 aa34.92■■■■□ 3.18
MSH2-203ENST00000454849 ZRANB1Q9UGI0 708 aa34.9■■■■□ 3.18
MSH2-203ENST00000454849 AKAP12Q02952 1782 aa34.9■■■■□ 3.18
MSH2-203ENST00000454849 TNKS1BP1Q9C0C2 1729 aaKnown RBP34.89■■■■□ 3.18
MSH2-203ENST00000454849 SOX12O15370 315 aa34.89■■■■□ 3.18
MSH2-203ENST00000454849 COL14A1Q05707 1796 aaKnown RBP34.89■■■■□ 3.18
MSH2-203ENST00000454849 CD163L1Q9NR16 1453 aa34.89■■■■□ 3.18
MSH2-203ENST00000454849 TMF1P82094 1093 aa34.88■■■■□ 3.17
MSH2-203ENST00000454849 HDGFL2Q7Z4V5 671 aaPredicted RBP34.88■■■■□ 3.17
MSH2-203ENST00000454849 STRN4Q9NRL3 753 aa34.88■■■■□ 3.17
MSH2-203ENST00000454849 GLI3P10071 1580 aa34.87■■■■□ 3.17
MSH2-203ENST00000454849 NWD2Q9ULI1 1742 aa34.87■■■■□ 3.17
MSH2-203ENST00000454849 PUS7Q96PZ0 661 aaKnown RBP34.86■■■■□ 3.17
MSH2-203ENST00000454849 NRKQ7Z2Y5 1582 aa34.86■■■■□ 3.17
MSH2-203ENST00000454849 PIK3C2AO00443 1686 aa34.86■■■■□ 3.17
MSH2-203ENST00000454849 NME9Q86XW9 330 aa34.84■■■■□ 3.17
MSH2-203ENST00000454849 TERF2IPQ9NYB0 399 aa34.84■■■■□ 3.17
MSH2-203ENST00000454849 TTC21AQ8NDW8 1320 aa34.83■■■■□ 3.17
MSH2-203ENST00000454849 UPF1Q92900 1129 aaKnown RBP eCLIP34.83■■■■□ 3.17
MSH2-203ENST00000454849 SLC24A1O60721 1099 aa34.82■■■■□ 3.16
MSH2-203ENST00000454849 A0A1W2PP64 1363 aa34.82■■■■□ 3.16
MSH2-203ENST00000454849 NRAPQ86VF7 1730 aa34.81■■■■□ 3.16
MSH2-203ENST00000454849 EVA1CP58658 441 aa34.8■■■■□ 3.16
MSH2-203ENST00000454849 SEPT12Q8IYM1 358 aa34.8■■■■□ 3.16
MSH2-203ENST00000454849 A0A0G2JS52 829 aa34.79■■■■□ 3.16
MSH2-203ENST00000454849 MYT1Q01538 1121 aa34.79■■■■□ 3.16
MSH2-203ENST00000454849 FAM98CQ17RN3 349 aaKnown RBP34.79■■■■□ 3.16
MSH2-203ENST00000454849 MON2Q7Z3U7 1717 aa34.78■■■■□ 3.16
MSH2-203ENST00000454849 CPDO75976 1380 aa34.78■■■■□ 3.16
MSH2-203ENST00000454849 SPATA31A5Q5VU36 1347 aa34.76■■■■□ 3.15
MSH2-203ENST00000454849 SPATA31A7Q8IWB4 1347 aa34.76■■■■□ 3.15
MSH2-203ENST00000454849 USP35Q9P2H5 1018 aa34.75■■■■□ 3.15
MSH2-203ENST00000454849 CAMTA1Q9Y6Y1 1673 aa34.75■■■■□ 3.15
MSH2-203ENST00000454849 SLIT3O75094 1523 aa34.75■■■■□ 3.15
MSH2-203ENST00000454849 HSPA5P11021 654 aaKnown RBP34.74■■■■□ 3.15
MSH2-203ENST00000454849 LARP1Q6PKG0 1096 aaKnown RBP34.73■■■■□ 3.15
MSH2-203ENST00000454849 POLR3GLQ9BT43 218 aa34.73■■■■□ 3.15
MSH2-203ENST00000454849 EDC4Q6P2E9 1401 aaKnown RBP34.72■■■■□ 3.15
MSH2-203ENST00000454849 EIF4G2P78344 907 aaKnown RBP eCLIP34.71■■■■□ 3.15
MSH2-203ENST00000454849 ONECUT3O60422 494 aaPredicted RBP34.7■■■■□ 3.15
MSH2-203ENST00000454849 NINLQ9Y2I6 1382 aa34.7■■■■□ 3.15
MSH2-203ENST00000454849 CDCA8Q53HL2 280 aa34.69■■■■□ 3.14
MSH2-203ENST00000454849 KCNH5Q8NCM2 988 aa34.69■■■■□ 3.14
MSH2-203ENST00000454849 SPATA31A1Q5TZJ5 1347 aa34.68■■■■□ 3.14
MSH2-203ENST00000454849 AXIN2Q9Y2T1 843 aa34.68■■■■□ 3.14
MSH2-203ENST00000454849 ARHGEF25Q86VW2 580 aa34.67■■■■□ 3.14
MSH2-203ENST00000454849 USP31Q70CQ4 1352 aa34.66■■■■□ 3.14
MSH2-203ENST00000454849 LMO7Q8WWI1 1683 aa34.66■■■■□ 3.14
MSH2-203ENST00000454849 AATKQ6ZMQ8 1374 aa34.65■■■■□ 3.14
MSH2-203ENST00000454849 ANKRD36BQ8N2N9 1353 aa34.64■■■■□ 3.14
MSH2-203ENST00000454849 BRWD3Q6RI45 1802 aa34.64■■■■□ 3.14
MSH2-203ENST00000454849 KRT27Q7Z3Y8 459 aa34.62■■■■□ 3.13
MSH2-203ENST00000454849 COL5A2P05997 1499 aaPredicted RBP34.61■■■■□ 3.13
MSH2-203ENST00000454849 FAM182BQ5T319 152 aa34.61■■■■□ 3.13
MSH2-203ENST00000454849 NFAT5O94916 1531 aa34.6■■■■□ 3.13
MSH2-203ENST00000454849 FBLN1P23142 703 aa34.58■■■■□ 3.13
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms