RNA–Protein interactions for RNA: ENST00000452489.6

PTPA-223, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 1 (best) BASIC

Gene PTPA, Length 2,526 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-223ENST00000452489 CROCC2H7BZ55 1655 aa22.9■■□□□ 1.26
PTPA-223ENST00000452489 LAMC3Q9Y6N6 1575 aa22.9■■□□□ 1.26
PTPA-223ENST00000452489 FKBP5Q13451 457 aaPredicted RBP22.88■■□□□ 1.25
PTPA-223ENST00000452489 ITPRIPQ8IWB1 547 aa22.88■■□□□ 1.25
PTPA-223ENST00000452489 ANKRD7Q92527 254 aa22.88■■□□□ 1.25
PTPA-223ENST00000452489 TBC1D9Q6ZT07 1266 aa22.88■■□□□ 1.25
PTPA-223ENST00000452489 NUCB1Q02818 461 aa22.87■■□□□ 1.25
PTPA-223ENST00000452489 RSPH4AQ5TD94 716 aa22.87■■□□□ 1.25
PTPA-223ENST00000452489 RIOK3O14730 519 aaKnown RBP22.86■■□□□ 1.25
PTPA-223ENST00000452489 BMP2KLQ5H9B9 411 aa22.86■■□□□ 1.25
PTPA-223ENST00000452489 CHMP4AQ9BY43 222 aa22.86■■□□□ 1.25
PTPA-223ENST00000452489 ZDHHC9Q9Y397 364 aa22.85■■□□□ 1.25
PTPA-223ENST00000452489 ZGPATQ8N5A5 531 aaKnown RBP22.84■■□□□ 1.25
PTPA-223ENST00000452489 TRIM27P14373 513 aa22.84■■□□□ 1.25
PTPA-223ENST00000452489 CHD1LQ86WJ1 897 aa22.84■■□□□ 1.25
PTPA-223ENST00000452489 TSPY26PQ9H489 355 aa22.84■■□□□ 1.25
PTPA-223ENST00000452489 SPTLC3Q9NUV7 552 aa22.84■■□□□ 1.25
PTPA-223ENST00000452489 TCP11L2Q8N4U5 519 aa22.83■■□□□ 1.25
PTPA-223ENST00000452489 OGFRQ9NZT2 677 aa22.83■■□□□ 1.25
PTPA-223ENST00000452489 PTPRGP23470 1445 aa22.83■■□□□ 1.25
PTPA-223ENST00000452489 FOXD4L5Q5VV16 416 aaPredicted RBP22.83■■□□□ 1.25
PTPA-223ENST00000452489 FOXD4L4Q8WXT5 416 aaPredicted RBP22.83■■□□□ 1.25
PTPA-223ENST00000452489 ADCY10Q96PN6 1610 aa22.83■■□□□ 1.25
PTPA-223ENST00000452489 PRG4Q92954 1404 aaPredicted RBP22.82■■□□□ 1.24
PTPA-223ENST00000452489 SLFN14P0C7P3 912 aa22.82■■□□□ 1.24
PTPA-223ENST00000452489 FEZ1Q99689 392 aa22.82■■□□□ 1.24
PTPA-223ENST00000452489 SYNMO15061 1565 aa22.82■■□□□ 1.24
PTPA-223ENST00000452489 GPATCH8Q9UKJ3 1502 aaKnown RBP22.81■■□□□ 1.24
PTPA-223ENST00000452489 USP25Q9UHP3 1055 aa22.81■■□□□ 1.24
PTPA-223ENST00000452489 DDX19BQ9UMR2 479 aa22.81■■□□□ 1.24
PTPA-223ENST00000452489 NPC1L1Q9UHC9 1359 aa22.8■■□□□ 1.24
PTPA-223ENST00000452489 GABPB1Q06547 395 aaPredicted RBP22.79■■□□□ 1.24
PTPA-223ENST00000452489 SMC4Q9NTJ3 1288 aa22.79■■□□□ 1.24
PTPA-223ENST00000452489 CDCA8Q53HL2 280 aa22.78■■□□□ 1.24
PTPA-223ENST00000452489 WDR63Q8IWG1 891 aa22.78■■□□□ 1.24
PTPA-223ENST00000452489 PHF23Q9BUL5 403 aaPredicted RBP22.78■■□□□ 1.24
PTPA-223ENST00000452489 C9orf84Q5VXU9 1444 aa22.78■■□□□ 1.24
PTPA-223ENST00000452489 NUP153P49790 1475 aaKnown RBP22.78■■□□□ 1.24
PTPA-223ENST00000452489 CERS3Q8IU89 383 aa22.77■■□□□ 1.24
PTPA-223ENST00000452489 RUNDC1Q96C34 613 aa22.77■■□□□ 1.24
PTPA-223ENST00000452489 CFAP74Q9C0B2 1584 aa22.77■■□□□ 1.24
PTPA-223ENST00000452489 CTIFO43310 598 aaKnown RBP22.77■■□□□ 1.24
PTPA-223ENST00000452489 RABEP1Q15276 862 aa22.76■■□□□ 1.23
PTPA-223ENST00000452489 TMEM57Q8N5G2 664 aa22.76■■□□□ 1.23
PTPA-223ENST00000452489 ZBTB40Q9NUA8 1239 aa22.76■■□□□ 1.23
PTPA-223ENST00000452489 PLA2R1Q13018 1463 aa22.75■■□□□ 1.23
PTPA-223ENST00000452489 DNAJC2Q99543 621 aaKnown RBP22.75■■□□□ 1.23
PTPA-223ENST00000452489 DIAPH3Q9NSV4 1193 aa22.75■■□□□ 1.23
PTPA-223ENST00000452489 ADCY5O95622 1261 aa22.75■■□□□ 1.23
PTPA-223ENST00000452489 MBD3O95983 291 aa22.75■■□□□ 1.23
PTPA-223ENST00000452489 NCBP1Q09161 790 aaKnown RBP22.75■■□□□ 1.23
PTPA-223ENST00000452489 ANKRD45Q5TZF3 282 aa22.75■■□□□ 1.23
PTPA-223ENST00000452489 TSR2Q969E8 191 aaKnown RBP22.75■■□□□ 1.23
PTPA-223ENST00000452489 CTNNA3Q9UI47 895 aa22.75■■□□□ 1.23
PTPA-223ENST00000452489 EIF2AK4Q9P2K8 1649 aaKnown RBP22.75■■□□□ 1.23
PTPA-223ENST00000452489 IQSEC2Q5JU85 1478 aa22.74■■□□□ 1.23
PTPA-223ENST00000452489 CCDC141Q6ZP82 1450 aa22.74■■□□□ 1.23
PTPA-223ENST00000452489 CAPN2P17655 700 aa22.74■■□□□ 1.23
PTPA-223ENST00000452489 SLC20A2Q08357 652 aa22.74■■□□□ 1.23
PTPA-223ENST00000452489 CHAF1AQ13111 956 aaPredicted RBP22.74■■□□□ 1.23
PTPA-223ENST00000452489 TIGD1Q96MW7 591 aa22.74■■□□□ 1.23
PTPA-223ENST00000452489 CWC22Q9HCG8 908 aaKnown RBP22.74■■□□□ 1.23
PTPA-223ENST00000452489 IQGAP2Q13576 1575 aa22.74■■□□□ 1.23
PTPA-223ENST00000452489 ZFP91Q96JP5 570 aaPredicted RBP22.73■■□□□ 1.23
PTPA-223ENST00000452489 MYOM1P52179 1685 aa22.73■■□□□ 1.23
PTPA-223ENST00000452489 MYO5CQ9NQX4 1742 aa22.73■■□□□ 1.23
PTPA-223ENST00000452489 CCDC66A2RUB6 948 aa22.72■■□□□ 1.23
PTPA-223ENST00000452489 ATF7IPQ6VMQ6 1270 aa22.72■■□□□ 1.23
PTPA-223ENST00000452489 SSH1Q8WYL5 1049 aa22.72■■□□□ 1.23
PTPA-223ENST00000452489 PYCARDQ9ULZ3 195 aa22.72■■□□□ 1.23
PTPA-223ENST00000452489 NOB1Q9ULX3 412 aaKnown RBP22.71■■□□□ 1.23
PTPA-223ENST00000452489 TERF2Q15554 542 aa22.71■■□□□ 1.23
PTPA-223ENST00000452489 POLR3AO14802 1390 aaPredicted RBP22.7■■□□□ 1.23
PTPA-223ENST00000452489 ERICH4A6NGS2 130 aa22.7■■□□□ 1.22
PTPA-223ENST00000452489 DDX41Q9UJV9 622 aaKnown RBP22.7■■□□□ 1.22
PTPA-223ENST00000452489 TROQ12816 1431 aaPredicted RBP22.7■■□□□ 1.22
PTPA-223ENST00000452489 KIAA1524Q8TCG1 905 aa22.7■■□□□ 1.22
PTPA-223ENST00000452489 CARD14Q9BXL6 1004 aa22.7■■□□□ 1.22
PTPA-223ENST00000452489 NUP160Q12769 1436 aa22.69■■□□□ 1.22
PTPA-223ENST00000452489 IRX3P78415 501 aaPredicted RBP22.69■■□□□ 1.22
PTPA-223ENST00000452489 CDC45O75419 566 aa22.69■■□□□ 1.22
PTPA-223ENST00000452489 RNF17Q9BXT8 1623 aaKnown RBP22.69■■□□□ 1.22
PTPA-223ENST00000452489 KANK1Q14678 1352 aa22.69■■□□□ 1.22
PTPA-223ENST00000452489 TRIM6-TRIM34B2RNG4 842 aa22.68■■□□□ 1.22
PTPA-223ENST00000452489 TRIM34Q9BYJ4 488 aa22.68■■□□□ 1.22
PTPA-223ENST00000452489 KCNF1Q9H3M0 494 aa22.68■■□□□ 1.22
PTPA-223ENST00000452489 EXOSC9Q06265 439 aaKnown RBP22.68■■□□□ 1.22
PTPA-223ENST00000452489 NAA30Q147X3 362 aaPredicted RBP22.68■■□□□ 1.22
PTPA-223ENST00000452489 AEBP1Q8IUX7 1158 aa22.67■■□□□ 1.22
PTPA-223ENST00000452489 TRERF1Q96PN7 1200 aa22.67■■□□□ 1.22
PTPA-223ENST00000452489 TULP2O00295 520 aa22.66■■□□□ 1.22
PTPA-223ENST00000452489 PBRM1Q86U86 1689 aa22.66■■□□□ 1.22
PTPA-223ENST00000452489 SHPRHQ149N8 1683 aa22.66■■□□□ 1.22
PTPA-223ENST00000452489 TSPY4P0CV99 314 aa22.66■■□□□ 1.22
PTPA-223ENST00000452489 TSPY10P0CW01 314 aa22.66■■□□□ 1.22
PTPA-223ENST00000452489 FOXD4L6Q3SYB3 417 aaPredicted RBP22.65■■□□□ 1.22
PTPA-223ENST00000452489 FOXD4L3Q6VB84 417 aaPredicted RBP22.65■■□□□ 1.22
PTPA-223ENST00000452489 VGFO15240 615 aaPredicted RBP22.65■■□□□ 1.22
PTPA-223ENST00000452489 PLCB2Q00722 1185 aa22.65■■□□□ 1.22
PTPA-223ENST00000452489 UVSSAQ2YD98 709 aa22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms