RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 SPRYD7Q5W111 196 aa6.65□□□□□ -1.34
HMGB3P21-201ENST00000452483 POLR3EQ9NVU0 708 aa6.65□□□□□ -1.34
HMGB3P21-201ENST00000452483 ZNF777Q9ULD5 760 aaPredicted RBP6.65□□□□□ -1.34
HMGB3P21-201ENST00000452483 CFAP99D6REC4 459 aa6.64□□□□□ -1.35
HMGB3P21-201ENST00000452483 RPIAP49247 311 aa6.64□□□□□ -1.35
HMGB3P21-201ENST00000452483 ZNF697Q5TEC3 545 aa6.64□□□□□ -1.35
HMGB3P21-201ENST00000452483 DESI1Q6ICB0 168 aa6.64□□□□□ -1.35
HMGB3P21-201ENST00000452483 FAM177A1Q8N128 213 aaPredicted RBP6.64□□□□□ -1.35
HMGB3P21-201ENST00000452483 CCDC24Q8N4L8 307 aa6.64□□□□□ -1.35
HMGB3P21-201ENST00000452483 NUDT12Q9BQG2 462 aa6.64□□□□□ -1.35
HMGB3P21-201ENST00000452483 LILRB3O75022 631 aa6.63□□□□□ -1.35
HMGB3P21-201ENST00000452483 CCNYL3P0C7X3 344 aa6.63□□□□□ -1.35
HMGB3P21-201ENST00000452483 SKIV2LQ15477 1246 aaKnown RBP6.63□□□□□ -1.35
HMGB3P21-201ENST00000452483 PTPRNQ16849 979 aa6.63□□□□□ -1.35
HMGB3P21-201ENST00000452483 Q6ZNB5 142 aa6.63□□□□□ -1.35
HMGB3P21-201ENST00000452483 ZNF598Q86UK7 904 aaKnown RBP6.63□□□□□ -1.35
HMGB3P21-201ENST00000452483 DHX37Q8IY37 1157 aaKnown RBP6.63□□□□□ -1.35
HMGB3P21-201ENST00000452483 NUTM2BA6NNL0 878 aaPredicted RBP6.62□□□□□ -1.35
HMGB3P21-201ENST00000452483 NUTM2EB1AL46 878 aaPredicted RBP6.62□□□□□ -1.35
HMGB3P21-201ENST00000452483 ZBTB24O43167 697 aaPredicted RBP6.62□□□□□ -1.35
HMGB3P21-201ENST00000452483 NUTM2DQ5VT03 806 aaPredicted RBP6.62□□□□□ -1.35
HMGB3P21-201ENST00000452483 NUTM2AQ8IVF1 878 aaPredicted RBP6.62□□□□□ -1.35
HMGB3P21-201ENST00000452483 TRIM32Q13049 653 aa6.61□□□□□ -1.35
HMGB3P21-201ENST00000452483 IRF5Q13568 498 aa6.61□□□□□ -1.35
HMGB3P21-201ENST00000452483 TRIM67Q6ZTA4 783 aa6.61□□□□□ -1.35
HMGB3P21-201ENST00000452483 TSC1Q92574 1164 aa6.61□□□□□ -1.35
HMGB3P21-201ENST00000452483 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.6□□□□□ -1.35
HMGB3P21-201ENST00000452483 PDZRN3Q9UPQ7 1066 aa6.6□□□□□ -1.35
HMGB3P21-201ENST00000452483 PATL2C9JE40 543 aaKnown RBP6.59□□□□□ -1.35
HMGB3P21-201ENST00000452483 GFRA3O60609 400 aa6.59□□□□□ -1.35
HMGB3P21-201ENST00000452483 CD2BP2O95400 341 aaKnown RBP6.59□□□□□ -1.35
HMGB3P21-201ENST00000452483 LAPTM4AQ15012 233 aa6.59□□□□□ -1.35
HMGB3P21-201ENST00000452483 RTL5Q5HYW3 569 aaPredicted RBP6.59□□□□□ -1.35
HMGB3P21-201ENST00000452483 PROSER2Q86WR7 435 aaPredicted RBP6.59□□□□□ -1.35
HMGB3P21-201ENST00000452483 PROCA1Q8NCQ7 364 aaPredicted RBP6.59□□□□□ -1.35
HMGB3P21-201ENST00000452483 HELBQ8NG08 1087 aaPredicted RBP6.59□□□□□ -1.35
HMGB3P21-201ENST00000452483 ATP1B4Q9UN42 357 aaPredicted RBP6.59□□□□□ -1.35
HMGB3P21-201ENST00000452483 TNFRSF10AO00220 468 aa6.58□□□□□ -1.36
HMGB3P21-201ENST00000452483 NRG2O14511 850 aaPredicted RBP6.58□□□□□ -1.36
HMGB3P21-201ENST00000452483 PPM1GO15355 546 aaPredicted RBP6.58□□□□□ -1.36
HMGB3P21-201ENST00000452483 PRR20EP86478 221 aa6.58□□□□□ -1.36
HMGB3P21-201ENST00000452483 PRR20CP86479 221 aa6.58□□□□□ -1.36
HMGB3P21-201ENST00000452483 PRR20DP86480 221 aa6.58□□□□□ -1.36
HMGB3P21-201ENST00000452483 PRR20BP86481 221 aa6.58□□□□□ -1.36
HMGB3P21-201ENST00000452483 PRR20AP86496 221 aa6.58□□□□□ -1.36
HMGB3P21-201ENST00000452483 LYPD8Q6UX82 237 aa6.58□□□□□ -1.36
HMGB3P21-201ENST00000452483 FAM9AQ8IZU1 332 aaPredicted RBP6.58□□□□□ -1.36
HMGB3P21-201ENST00000452483 GOPCQ9HD26 462 aa6.58□□□□□ -1.36
HMGB3P21-201ENST00000452483 PER1O15534 1290 aaPredicted RBP6.57□□□□□ -1.36
HMGB3P21-201ENST00000452483 GDF9O60383 454 aa6.57□□□□□ -1.36
HMGB3P21-201ENST00000452483 F12P00748 615 aaPredicted RBP6.57□□□□□ -1.36
HMGB3P21-201ENST00000452483 KCNH2Q12809 1159 aa6.57□□□□□ -1.36
HMGB3P21-201ENST00000452483 FBXO31Q5XUX0 539 aaPredicted RBP6.57□□□□□ -1.36
HMGB3P21-201ENST00000452483 PTCRAQ6ISU1 281 aaPredicted RBP6.57□□□□□ -1.36
HMGB3P21-201ENST00000452483 UBE2Q2Q8WVN8 375 aa6.57□□□□□ -1.36
HMGB3P21-201ENST00000452483 PCMTD1Q96MG8 357 aaPredicted RBP6.57□□□□□ -1.36
HMGB3P21-201ENST00000452483 UNC93B1Q9H1C4 597 aa6.57□□□□□ -1.36
HMGB3P21-201ENST00000452483 EVA1BQ9NVM1 165 aa6.57□□□□□ -1.36
HMGB3P21-201ENST00000452483 PKD2L1Q9P0L9 805 aa6.57□□□□□ -1.36
HMGB3P21-201ENST00000452483 MAP10Q9P2G4 905 aa6.57□□□□□ -1.36
HMGB3P21-201ENST00000452483 CTHP32929 405 aa6.56□□□□□ -1.36
HMGB3P21-201ENST00000452483 PDE4CQ08493 712 aa6.56□□□□□ -1.36
HMGB3P21-201ENST00000452483 FOXC1Q12948 553 aa6.56□□□□□ -1.36
HMGB3P21-201ENST00000452483 PPP2R2DQ66LE6 453 aa6.56□□□□□ -1.36
HMGB3P21-201ENST00000452483 AMOTL2Q9Y2J4 779 aa6.56□□□□□ -1.36
HMGB3P21-201ENST00000452483 WNT7BP56706 349 aa6.55□□□□□ -1.36
HMGB3P21-201ENST00000452483 WNT7AO00755 349 aa6.54□□□□□ -1.36
HMGB3P21-201ENST00000452483 SKOR1P84550 965 aa6.54□□□□□ -1.36
HMGB3P21-201ENST00000452483 RFC5P40937 340 aa6.53□□□□□ -1.36
HMGB3P21-201ENST00000452483 MCM6Q14566 821 aa6.53□□□□□ -1.36
HMGB3P21-201ENST00000452483 LINC01559Q495D7 138 aa6.53□□□□□ -1.36
HMGB3P21-201ENST00000452483 ACIN1Q9UKV3 1341 aaKnown RBP6.52□□□□□ -1.37
HMGB3P21-201ENST00000452483 CTDSPL2Q05D32 466 aa6.52□□□□□ -1.37
HMGB3P21-201ENST00000452483 ZNF511Q8NB15 262 aa6.52□□□□□ -1.37
HMGB3P21-201ENST00000452483 MRGPRX2Q96LB1 330 aa6.52□□□□□ -1.37
HMGB3P21-201ENST00000452483 FAM187AA6NFU0 413 aa6.51□□□□□ -1.37
HMGB3P21-201ENST00000452483 AP1G2O75843 785 aa6.51□□□□□ -1.37
HMGB3P21-201ENST00000452483 USP17L8P0C7I0 530 aa6.51□□□□□ -1.37
HMGB3P21-201ENST00000452483 SH3BP2P78314 561 aa6.51□□□□□ -1.37
HMGB3P21-201ENST00000452483 KCNA1Q09470 495 aa6.51□□□□□ -1.37
HMGB3P21-201ENST00000452483 CCDC27Q2M243 656 aa6.51□□□□□ -1.37
HMGB3P21-201ENST00000452483 RC3H1Q5TC82 1133 aaKnown RBP6.51□□□□□ -1.37
HMGB3P21-201ENST00000452483 CCDC125Q86Z20 511 aa6.51□□□□□ -1.37
HMGB3P21-201ENST00000452483 CYP4X1Q8N118 509 aa6.51□□□□□ -1.37
HMGB3P21-201ENST00000452483 EHBP1Q8NDI1 1231 aa6.51□□□□□ -1.37
HMGB3P21-201ENST00000452483 LRRN4Q8WUT4 740 aa6.51□□□□□ -1.37
HMGB3P21-201ENST00000452483 BAP1Q92560 729 aa6.51□□□□□ -1.37
HMGB3P21-201ENST00000452483 TOR4AQ9NXH8 423 aa6.51□□□□□ -1.37
HMGB3P21-201ENST00000452483 LOC100996750A0A140TA64 210 aa6.5□□□□□ -1.37
HMGB3P21-201ENST00000452483 PPP1R15AO75807 674 aaPredicted RBP6.5□□□□□ -1.37
HMGB3P21-201ENST00000452483 PKDCCQ504Y2 493 aa6.5□□□□□ -1.37
HMGB3P21-201ENST00000452483 KRTAP4-6Q9BYQ5 205 aa6.5□□□□□ -1.37
HMGB3P21-201ENST00000452483 FNBP4Q8N3X1 1017 aaPredicted RBP6.49□□□□□ -1.37
HMGB3P21-201ENST00000452483 TTC24A2A3L6 582 aaPredicted RBP6.48□□□□□ -1.37
HMGB3P21-201ENST00000452483 LCE2BO14633 110 aa6.48□□□□□ -1.37
HMGB3P21-201ENST00000452483 DGAT1O75907 488 aa6.48□□□□□ -1.37
HMGB3P21-201ENST00000452483 CANXP27824 592 aaKnown RBP6.48□□□□□ -1.37
HMGB3P21-201ENST00000452483 NBPF14Q5TI25 921 aa6.48□□□□□ -1.37
HMGB3P21-201ENST00000452483 ARMC2Q8NEN0 867 aa6.48□□□□□ -1.37
HMGB3P21-201ENST00000452483 SNIP1Q8TAD8 396 aaKnown RBP6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms