RNA–Protein interactions for RNA: ENST00000452111.5

CTNS-204, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3

Gene CTNS, Length 617 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-204ENST00000452111 SLIT2O94813 1529 aa25.58■■□□□ 1.68
CTNS-204ENST00000452111 CARD11Q9BXL7 1154 aa25.57■■□□□ 1.68
CTNS-204ENST00000452111 ABCA3Q99758 1704 aa25.56■■□□□ 1.68
CTNS-204ENST00000452111 EVC2Q86UK5 1308 aa25.56■■□□□ 1.68
CTNS-204ENST00000452111 RALGAPBQ86X10 1494 aa25.55■■□□□ 1.68
CTNS-204ENST00000452111 UNC5CLQ8IV45 518 aa25.55■■□□□ 1.68
CTNS-204ENST00000452111 GJD4Q96KN9 370 aaPredicted RBP25.52■■□□□ 1.68
CTNS-204ENST00000452111 FAM83GA6ND36 823 aa25.51■■□□□ 1.67
CTNS-204ENST00000452111 NUTM2GQ5VZR2 741 aa25.51■■□□□ 1.67
CTNS-204ENST00000452111 PCGF6Q9BYE7 350 aa25.51■■□□□ 1.67
CTNS-204ENST00000452111 CABP1Q9NZU7 370 aa25.51■■□□□ 1.67
CTNS-204ENST00000452111 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.49■■□□□ 1.67
CTNS-204ENST00000452111 UPF1Q92900 1129 aaKnown RBP eCLIP25.48■■□□□ 1.67
CTNS-204ENST00000452111 PLCH1Q4KWH8 1693 aa25.46■■□□□ 1.67
CTNS-204ENST00000452111 ABTB2Q8N961 1025 aa25.46■■□□□ 1.67
CTNS-204ENST00000452111 BTG4Q9NY30 223 aa25.45■■□□□ 1.66
CTNS-204ENST00000452111 CCDC9Q9Y3X0 531 aaKnown RBP25.45■■□□□ 1.66
CTNS-204ENST00000452111 CRYBG1Q9Y4K1 1723 aa25.44■■□□□ 1.66
CTNS-204ENST00000452111 VPS72Q15906 364 aa25.44■■□□□ 1.66
CTNS-204ENST00000452111 PRDM11Q9NQV5 511 aa25.44■■□□□ 1.66
CTNS-204ENST00000452111 SBNO2Q9Y2G9 1366 aa25.44■■□□□ 1.66
CTNS-204ENST00000452111 USP6P35125 1406 aa25.43■■□□□ 1.66
CTNS-204ENST00000452111 GLI3P10071 1580 aa25.43■■□□□ 1.66
CTNS-204ENST00000452111 NWD2Q9ULI1 1742 aa25.42■■□□□ 1.66
CTNS-204ENST00000452111 ATAD2Q6PL18 1390 aa25.42■■□□□ 1.66
CTNS-204ENST00000452111 KIAA0232Q92628 1395 aa25.42■■□□□ 1.66
CTNS-204ENST00000452111 ZC3H6P61129 1189 aaKnown RBP25.41■■□□□ 1.66
CTNS-204ENST00000452111 COL14A1Q05707 1796 aaKnown RBP25.4■■□□□ 1.66
CTNS-204ENST00000452111 BRD4O60885 1362 aaPredicted RBP25.4■■□□□ 1.66
CTNS-204ENST00000452111 PHRF1Q9P1Y6 1649 aaKnown RBP25.4■■□□□ 1.66
CTNS-204ENST00000452111 CHRNA2Q15822 529 aa25.39■■□□□ 1.66
CTNS-204ENST00000452111 NLRP13Q86W25 1043 aa25.38■■□□□ 1.65
CTNS-204ENST00000452111 USP19O94966 1318 aa25.37■■□□□ 1.65
CTNS-204ENST00000452111 NRAPQ86VF7 1730 aa25.36■■□□□ 1.65
CTNS-204ENST00000452111 NRKQ7Z2Y5 1582 aa25.35■■□□□ 1.65
CTNS-204ENST00000452111 SSH2Q76I76 1423 aa25.35■■□□□ 1.65
CTNS-204ENST00000452111 CLSPNQ9HAW4 1339 aa25.35■■□□□ 1.65
CTNS-204ENST00000452111 NLRP6P59044 892 aa25.34■■□□□ 1.65
CTNS-204ENST00000452111 SEPT12Q8IYM1 358 aa25.34■■□□□ 1.65
CTNS-204ENST00000452111 ZNF692Q9BU19 519 aaPredicted RBP25.34■■□□□ 1.65
CTNS-204ENST00000452111 ST20-MTHFSA0A0A6YYL1 179 aa25.33■■□□□ 1.65
CTNS-204ENST00000452111 A0A0G2JS52 829 aa25.32■■□□□ 1.64
CTNS-204ENST00000452111 GCP02774 474 aa25.32■■□□□ 1.64
CTNS-204ENST00000452111 MYT1Q01538 1121 aa25.32■■□□□ 1.64
CTNS-204ENST00000452111 TMC1Q8TDI8 760 aa25.32■■□□□ 1.64
CTNS-204ENST00000452111 TTC21BQ7Z4L5 1316 aa25.32■■□□□ 1.64
CTNS-204ENST00000452111 CPSF1Q10570 1443 aaKnown RBP25.31■■□□□ 1.64
CTNS-204ENST00000452111 FAM98CQ17RN3 349 aaKnown RBP25.31■■□□□ 1.64
CTNS-204ENST00000452111 STRN4Q9NRL3 753 aa25.31■■□□□ 1.64
CTNS-204ENST00000452111 KTN1Q86UP2 1357 aaKnown RBP25.31■■□□□ 1.64
CTNS-204ENST00000452111 TESK2Q96S53 571 aa25.3■■□□□ 1.64
CTNS-204ENST00000452111 CPDO75976 1380 aa25.3■■□□□ 1.64
CTNS-204ENST00000452111 SPATA31A5Q5VU36 1347 aa25.29■■□□□ 1.64
CTNS-204ENST00000452111 SPATA31A7Q8IWB4 1347 aa25.29■■□□□ 1.64
CTNS-204ENST00000452111 ZBTB7CA1YPR0 619 aa25.28■■□□□ 1.64
CTNS-204ENST00000452111 ONECUT3O60422 494 aaPredicted RBP25.28■■□□□ 1.64
CTNS-204ENST00000452111 TIMELESSQ9UNS1 1208 aa25.28■■□□□ 1.64
CTNS-204ENST00000452111 PIK3C2AO00443 1686 aa25.27■■□□□ 1.64
CTNS-204ENST00000452111 EP400Q96L91 3159 aa25.27■■□□□ 1.64
CTNS-204ENST00000452111 CCER1Q8TC90 406 aaPredicted RBP25.27■■□□□ 1.64
CTNS-204ENST00000452111 SLC12A5Q9H2X9 1139 aa25.27■■□□□ 1.64
CTNS-204ENST00000452111 TTC21AQ8NDW8 1320 aa25.27■■□□□ 1.64
CTNS-204ENST00000452111 USP47Q96K76 1375 aa25.27■■□□□ 1.64
CTNS-204ENST00000452111 AKAP12Q02952 1782 aa25.26■■□□□ 1.63
CTNS-204ENST00000452111 SLIT3O75094 1523 aa25.26■■□□□ 1.63
CTNS-204ENST00000452111 EVA1CP58658 441 aa25.25■■□□□ 1.63
CTNS-204ENST00000452111 CD163L1Q9NR16 1453 aa25.25■■□□□ 1.63
CTNS-204ENST00000452111 KRT27Q7Z3Y8 459 aa25.24■■□□□ 1.63
CTNS-204ENST00000452111 HDGFL2Q7Z4V5 671 aaPredicted RBP25.24■■□□□ 1.63
CTNS-204ENST00000452111 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.24■■□□□ 1.63
CTNS-204ENST00000452111 CAMTA1Q9Y6Y1 1673 aa25.23■■□□□ 1.63
CTNS-204ENST00000452111 SPATA31A1Q5TZJ5 1347 aa25.23■■□□□ 1.63
CTNS-204ENST00000452111 SOX12O15370 315 aa25.23■■□□□ 1.63
CTNS-204ENST00000452111 PUS7Q96PZ0 661 aaKnown RBP25.23■■□□□ 1.63
CTNS-204ENST00000452111 USP35Q9P2H5 1018 aa25.22■■□□□ 1.63
CTNS-204ENST00000452111 LMO7Q8WWI1 1683 aa25.21■■□□□ 1.63
CTNS-204ENST00000452111 A0A1W2PP64 1363 aa25.2■■□□□ 1.63
CTNS-204ENST00000452111 SLC24A1O60721 1099 aa25.2■■□□□ 1.62
CTNS-204ENST00000452111 LARP1Q6PKG0 1096 aaKnown RBP25.2■■□□□ 1.62
CTNS-204ENST00000452111 TERF2IPQ9NYB0 399 aa25.2■■□□□ 1.62
CTNS-204ENST00000452111 BRWD3Q6RI45 1802 aa25.2■■□□□ 1.62
CTNS-204ENST00000452111 MON2Q7Z3U7 1717 aa25.2■■□□□ 1.62
CTNS-204ENST00000452111 KCNH5Q8NCM2 988 aa25.19■■□□□ 1.62
CTNS-204ENST00000452111 ZRANB1Q9UGI0 708 aa25.19■■□□□ 1.62
CTNS-204ENST00000452111 NME9Q86XW9 330 aa25.18■■□□□ 1.62
CTNS-204ENST00000452111 AATKQ6ZMQ8 1374 aa25.18■■□□□ 1.62
CTNS-204ENST00000452111 COL5A2P05997 1499 aaPredicted RBP25.17■■□□□ 1.62
CTNS-204ENST00000452111 TMF1P82094 1093 aa25.17■■□□□ 1.62
CTNS-204ENST00000452111 NINLQ9Y2I6 1382 aa25.17■■□□□ 1.62
CTNS-204ENST00000452111 EDC4Q6P2E9 1401 aaKnown RBP25.16■■□□□ 1.62
CTNS-204ENST00000452111 CCDC125Q86Z20 511 aa25.16■■□□□ 1.62
CTNS-204ENST00000452111 THSD7AQ9UPZ6 1657 aa25.14■■□□□ 1.62
CTNS-204ENST00000452111 BLMP54132 1417 aaPredicted RBP25.14■■□□□ 1.62
CTNS-204ENST00000452111 ARHGEF25Q86VW2 580 aa25.14■■□□□ 1.62
CTNS-204ENST00000452111 USP31Q70CQ4 1352 aa25.14■■□□□ 1.61
CTNS-204ENST00000452111 TCP11L2Q8N4U5 519 aa25.13■■□□□ 1.61
CTNS-204ENST00000452111 FAM182BQ5T319 152 aa25.12■■□□□ 1.61
CTNS-204ENST00000452111 BARGINQ6ZT62 677 aa25.12■■□□□ 1.61
CTNS-204ENST00000452111 AXIN2Q9Y2T1 843 aa25.12■■□□□ 1.61
CTNS-204ENST00000452111 NFAT5O94916 1531 aa25.12■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms