RNA–Protein interactions for RNA: ENST00000451964.5

CSNK1E-211, Transcript of casein kinase 1 epsilon, humanhuman

TSL 3

Gene CSNK1E, Length 873 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-211ENST00000451964 PPIP5K1Q6PFW1 1433 aa17.59■□□□□ 0.41
CSNK1E-211ENST00000451964 EVC2Q86UK5 1308 aa17.59■□□□□ 0.41
CSNK1E-211ENST00000451964 NUTM2GQ5VZR2 741 aa17.58■□□□□ 0.4
CSNK1E-211ENST00000451964 GJD4Q96KN9 370 aaPredicted RBP17.58■□□□□ 0.4
CSNK1E-211ENST00000451964 RALGAPBQ86X10 1494 aa17.57■□□□□ 0.4
CSNK1E-211ENST00000451964 ALS2Q96Q42 1657 aa17.57■□□□□ 0.4
CSNK1E-211ENST00000451964 QRICH2Q9H0J4 1663 aa17.57■□□□□ 0.4
CSNK1E-211ENST00000451964 TOPAZ1Q8N9V7 1692 aa17.56■□□□□ 0.4
CSNK1E-211ENST00000451964 UPF1Q92900 1129 aaKnown RBP eCLIP17.56■□□□□ 0.4
CSNK1E-211ENST00000451964 ABTB2Q8N961 1025 aa17.54■□□□□ 0.4
CSNK1E-211ENST00000451964 ITSN1Q15811 1721 aa17.54■□□□□ 0.4
CSNK1E-211ENST00000451964 MARF1Q9Y4F3 1742 aaKnown RBP17.53■□□□□ 0.4
CSNK1E-211ENST00000451964 VPS72Q15906 364 aa17.53■□□□□ 0.4
CSNK1E-211ENST00000451964 BTG4Q9NY30 223 aa17.53■□□□□ 0.4
CSNK1E-211ENST00000451964 SBNO2Q9Y2G9 1366 aa17.53■□□□□ 0.4
CSNK1E-211ENST00000451964 ABCA3Q99758 1704 aa17.52■□□□□ 0.39
CSNK1E-211ENST00000451964 USP6P35125 1406 aa17.5■□□□□ 0.39
CSNK1E-211ENST00000451964 SSH2Q76I76 1423 aa17.5■□□□□ 0.39
CSNK1E-211ENST00000451964 ZC3H6P61129 1189 aaKnown RBP17.5■□□□□ 0.39
CSNK1E-211ENST00000451964 PRDM11Q9NQV5 511 aa17.5■□□□□ 0.39
CSNK1E-211ENST00000451964 KIAA0232Q92628 1395 aa17.5■□□□□ 0.39
CSNK1E-211ENST00000451964 USP19O94966 1318 aa17.49■□□□□ 0.39
CSNK1E-211ENST00000451964 ST20-MTHFSA0A0A6YYL1 179 aa17.49■□□□□ 0.39
CSNK1E-211ENST00000451964 CHRNA2Q15822 529 aa17.49■□□□□ 0.39
CSNK1E-211ENST00000451964 TESK2Q96S53 571 aa17.49■□□□□ 0.39
CSNK1E-211ENST00000451964 BRD4O60885 1362 aaPredicted RBP17.49■□□□□ 0.39
CSNK1E-211ENST00000451964 NLRP13Q86W25 1043 aa17.48■□□□□ 0.39
CSNK1E-211ENST00000451964 ZNF692Q9BU19 519 aaPredicted RBP17.48■□□□□ 0.39
CSNK1E-211ENST00000451964 CCDC9Q9Y3X0 531 aaKnown RBP17.48■□□□□ 0.39
CSNK1E-211ENST00000451964 ATAD2Q6PL18 1390 aa17.48■□□□□ 0.39
CSNK1E-211ENST00000451964 GLI3P10071 1580 aa17.48■□□□□ 0.39
CSNK1E-211ENST00000451964 CLSPNQ9HAW4 1339 aa17.47■□□□□ 0.39
CSNK1E-211ENST00000451964 ONECUT3O60422 494 aaPredicted RBP17.47■□□□□ 0.39
CSNK1E-211ENST00000451964 GCP02774 474 aa17.47■□□□□ 0.39
CSNK1E-211ENST00000451964 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.47■□□□□ 0.39
CSNK1E-211ENST00000451964 CRYBG1Q9Y4K1 1723 aa17.47■□□□□ 0.39
CSNK1E-211ENST00000451964 NLRP6P59044 892 aa17.46■□□□□ 0.39
CSNK1E-211ENST00000451964 SEPT12Q8IYM1 358 aa17.46■□□□□ 0.39
CSNK1E-211ENST00000451964 TIMELESSQ9UNS1 1208 aa17.46■□□□□ 0.39
CSNK1E-211ENST00000451964 CPSF1Q10570 1443 aaKnown RBP17.46■□□□□ 0.39
CSNK1E-211ENST00000451964 TTC21BQ7Z4L5 1316 aa17.46■□□□□ 0.38
CSNK1E-211ENST00000451964 SLC12A5Q9H2X9 1139 aa17.45■□□□□ 0.38
CSNK1E-211ENST00000451964 PLCH1Q4KWH8 1693 aa17.45■□□□□ 0.38
CSNK1E-211ENST00000451964 TMC1Q8TDI8 760 aa17.43■□□□□ 0.38
CSNK1E-211ENST00000451964 NWD2Q9ULI1 1742 aa17.43■□□□□ 0.38
CSNK1E-211ENST00000451964 SPATA31A5Q5VU36 1347 aa17.43■□□□□ 0.38
CSNK1E-211ENST00000451964 SPATA31A7Q8IWB4 1347 aa17.43■□□□□ 0.38
CSNK1E-211ENST00000451964 COL14A1Q05707 1796 aaKnown RBP17.43■□□□□ 0.38
CSNK1E-211ENST00000451964 CPDO75976 1380 aa17.42■□□□□ 0.38
CSNK1E-211ENST00000451964 FAM98CQ17RN3 349 aaKnown RBP17.42■□□□□ 0.38
CSNK1E-211ENST00000451964 PUS7Q96PZ0 661 aaKnown RBP17.42■□□□□ 0.38
CSNK1E-211ENST00000451964 CD163L1Q9NR16 1453 aa17.42■□□□□ 0.38
CSNK1E-211ENST00000451964 KTN1Q86UP2 1357 aaKnown RBP17.41■□□□□ 0.38
CSNK1E-211ENST00000451964 PHRF1Q9P1Y6 1649 aaKnown RBP17.41■□□□□ 0.38
CSNK1E-211ENST00000451964 CCER1Q8TC90 406 aaPredicted RBP17.41■□□□□ 0.38
CSNK1E-211ENST00000451964 STRN4Q9NRL3 753 aa17.41■□□□□ 0.38
CSNK1E-211ENST00000451964 USP47Q96K76 1375 aa17.4■□□□□ 0.38
CSNK1E-211ENST00000451964 NRKQ7Z2Y5 1582 aa17.4■□□□□ 0.38
CSNK1E-211ENST00000451964 ZRANB1Q9UGI0 708 aa17.4■□□□□ 0.38
CSNK1E-211ENST00000451964 NRAPQ86VF7 1730 aa17.4■□□□□ 0.38
CSNK1E-211ENST00000451964 TTC21AQ8NDW8 1320 aa17.4■□□□□ 0.38
CSNK1E-211ENST00000451964 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.39■□□□□ 0.37
CSNK1E-211ENST00000451964 SPATA31A1Q5TZJ5 1347 aa17.39■□□□□ 0.37
CSNK1E-211ENST00000451964 EVA1CP58658 441 aa17.38■□□□□ 0.37
CSNK1E-211ENST00000451964 LARP1Q6PKG0 1096 aaKnown RBP17.38■□□□□ 0.37
CSNK1E-211ENST00000451964 CAMTA1Q9Y6Y1 1673 aa17.38■□□□□ 0.37
CSNK1E-211ENST00000451964 EP400Q96L91 3159 aa17.38■□□□□ 0.37
CSNK1E-211ENST00000451964 ZBTB7CA1YPR0 619 aa17.37■□□□□ 0.37
CSNK1E-211ENST00000451964 KRT27Q7Z3Y8 459 aa17.37■□□□□ 0.37
CSNK1E-211ENST00000451964 HDGFL2Q7Z4V5 671 aaPredicted RBP17.37■□□□□ 0.37
CSNK1E-211ENST00000451964 SLIT3O75094 1523 aa17.37■□□□□ 0.37
CSNK1E-211ENST00000451964 PIK3C2AO00443 1686 aa17.36■□□□□ 0.37
CSNK1E-211ENST00000451964 A0A0G2JS52 829 aa17.36■□□□□ 0.37
CSNK1E-211ENST00000451964 SLC24A1O60721 1099 aa17.36■□□□□ 0.37
CSNK1E-211ENST00000451964 MYT1Q01538 1121 aa17.36■□□□□ 0.37
CSNK1E-211ENST00000451964 NME9Q86XW9 330 aa17.36■□□□□ 0.37
CSNK1E-211ENST00000451964 SOX12O15370 315 aa17.35■□□□□ 0.37
CSNK1E-211ENST00000451964 ARHGEF25Q86VW2 580 aa17.35■□□□□ 0.37
CSNK1E-211ENST00000451964 TERF2IPQ9NYB0 399 aa17.35■□□□□ 0.37
CSNK1E-211ENST00000451964 USP35Q9P2H5 1018 aa17.35■□□□□ 0.37
CSNK1E-211ENST00000451964 AXIN2Q9Y2T1 843 aa17.35■□□□□ 0.37
CSNK1E-211ENST00000451964 A0A1W2PP64 1363 aa17.35■□□□□ 0.37
CSNK1E-211ENST00000451964 AATKQ6ZMQ8 1374 aa17.35■□□□□ 0.37
CSNK1E-211ENST00000451964 USP31Q70CQ4 1352 aa17.34■□□□□ 0.37
CSNK1E-211ENST00000451964 KCNH5Q8NCM2 988 aa17.34■□□□□ 0.37
CSNK1E-211ENST00000451964 AKAP12Q02952 1782 aa17.33■□□□□ 0.37
CSNK1E-211ENST00000451964 TMF1P82094 1093 aa17.33■□□□□ 0.36
CSNK1E-211ENST00000451964 LMO7Q8WWI1 1683 aa17.32■□□□□ 0.36
CSNK1E-211ENST00000451964 FAM182BQ5T319 152 aa17.32■□□□□ 0.36
CSNK1E-211ENST00000451964 CCDC125Q86Z20 511 aa17.32■□□□□ 0.36
CSNK1E-211ENST00000451964 COL5A2P05997 1499 aaPredicted RBP17.31■□□□□ 0.36
CSNK1E-211ENST00000451964 EDC4Q6P2E9 1401 aaKnown RBP17.31■□□□□ 0.36
CSNK1E-211ENST00000451964 BARGINQ6ZT62 677 aa17.31■□□□□ 0.36
CSNK1E-211ENST00000451964 NINLQ9Y2I6 1382 aa17.3■□□□□ 0.36
CSNK1E-211ENST00000451964 TCP11L2Q8N4U5 519 aa17.3■□□□□ 0.36
CSNK1E-211ENST00000451964 BRWD3Q6RI45 1802 aa17.29■□□□□ 0.36
CSNK1E-211ENST00000451964 MON2Q7Z3U7 1717 aa17.29■□□□□ 0.36
CSNK1E-211ENST00000451964 NFAT5O94916 1531 aa17.28■□□□□ 0.36
CSNK1E-211ENST00000451964 BLMP54132 1417 aaPredicted RBP17.28■□□□□ 0.36
CSNK1E-211ENST00000451964 THSD7AQ9UPZ6 1657 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms