RNA–Protein interactions for RNA: ENST00000450385.5

SGCE-208, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-208ENST00000450385 CABLES1Q8TDN4 633 aa22.9■■□□□ 1.26
SGCE-208ENST00000450385 QRICH2Q9H0J4 1663 aa22.9■■□□□ 1.26
SGCE-208ENST00000450385 ACEP12821 1306 aa22.89■■□□□ 1.26
SGCE-208ENST00000450385 EVC2Q86UK5 1308 aa22.89■■□□□ 1.26
SGCE-208ENST00000450385 PAK3O75914 559 aaPredicted RBP22.89■■□□□ 1.25
SGCE-208ENST00000450385 VPS72Q15906 364 aa22.89■■□□□ 1.25
SGCE-208ENST00000450385 ATAD2Q6PL18 1390 aa22.88■■□□□ 1.25
SGCE-208ENST00000450385 FAM83GA6ND36 823 aa22.87■■□□□ 1.25
SGCE-208ENST00000450385 TONSLQ96HA7 1378 aa22.86■■□□□ 1.25
SGCE-208ENST00000450385 ONECUT3O60422 494 aaPredicted RBP22.85■■□□□ 1.25
SGCE-208ENST00000450385 CCDC125Q86Z20 511 aa22.85■■□□□ 1.25
SGCE-208ENST00000450385 COL14A1Q05707 1796 aaKnown RBP22.85■■□□□ 1.25
SGCE-208ENST00000450385 PLCH1Q4KWH8 1693 aa22.84■■□□□ 1.25
SGCE-208ENST00000450385 PPIP5K1Q6PFW1 1433 aa22.83■■□□□ 1.25
SGCE-208ENST00000450385 CRYBG1Q9Y4K1 1723 aa22.83■■□□□ 1.25
SGCE-208ENST00000450385 SLC24A1O60721 1099 aa22.83■■□□□ 1.25
SGCE-208ENST00000450385 RALGAPBQ86X10 1494 aa22.83■■□□□ 1.25
SGCE-208ENST00000450385 SBNO2Q9Y2G9 1366 aa22.82■■□□□ 1.24
SGCE-208ENST00000450385 ZNF692Q9BU19 519 aaPredicted RBP22.82■■□□□ 1.24
SGCE-208ENST00000450385 CABP2Q9NPB3 220 aa22.82■■□□□ 1.24
SGCE-208ENST00000450385 EP400Q96L91 3159 aa22.81■■□□□ 1.24
SGCE-208ENST00000450385 ABTB2Q8N961 1025 aa22.8■■□□□ 1.24
SGCE-208ENST00000450385 NLRP13Q86W25 1043 aa22.79■■□□□ 1.24
SGCE-208ENST00000450385 BTG4Q9NY30 223 aa22.79■■□□□ 1.24
SGCE-208ENST00000450385 GLI3P10071 1580 aa22.79■■□□□ 1.24
SGCE-208ENST00000450385 CARD11Q9BXL7 1154 aa22.78■■□□□ 1.24
SGCE-208ENST00000450385 PRDM11Q9NQV5 511 aa22.78■■□□□ 1.24
SGCE-208ENST00000450385 CABP1Q9NZU7 370 aa22.78■■□□□ 1.24
SGCE-208ENST00000450385 PUS7Q96PZ0 661 aaKnown RBP22.76■■□□□ 1.23
SGCE-208ENST00000450385 NRAPQ86VF7 1730 aa22.76■■□□□ 1.23
SGCE-208ENST00000450385 PLEKHG5O94827 1062 aa22.75■■□□□ 1.23
SGCE-208ENST00000450385 CCDC9Q9Y3X0 531 aaKnown RBP22.75■■□□□ 1.23
SGCE-208ENST00000450385 USP19O94966 1318 aa22.75■■□□□ 1.23
SGCE-208ENST00000450385 PHRF1Q9P1Y6 1649 aaKnown RBP22.75■■□□□ 1.23
SGCE-208ENST00000450385 CPDO75976 1380 aa22.74■■□□□ 1.23
SGCE-208ENST00000450385 USP6P35125 1406 aa22.74■■□□□ 1.23
SGCE-208ENST00000450385 SEPT12Q8IYM1 358 aa22.73■■□□□ 1.23
SGCE-208ENST00000450385 TIMELESSQ9UNS1 1208 aa22.73■■□□□ 1.23
SGCE-208ENST00000450385 CLSPNQ9HAW4 1339 aa22.73■■□□□ 1.23
SGCE-208ENST00000450385 KIAA0232Q92628 1395 aa22.72■■□□□ 1.23
SGCE-208ENST00000450385 SPATA31A5Q5VU36 1347 aa22.71■■□□□ 1.23
SGCE-208ENST00000450385 SPATA31A7Q8IWB4 1347 aa22.71■■□□□ 1.23
SGCE-208ENST00000450385 GCP02774 474 aa22.7■■□□□ 1.22
SGCE-208ENST00000450385 SSH2Q76I76 1423 aa22.7■■□□□ 1.22
SGCE-208ENST00000450385 BRWD3Q6RI45 1802 aa22.7■■□□□ 1.22
SGCE-208ENST00000450385 TTC21AQ8NDW8 1320 aa22.69■■□□□ 1.22
SGCE-208ENST00000450385 ZC3H6P61129 1189 aaKnown RBP22.68■■□□□ 1.22
SGCE-208ENST00000450385 NUTM2GQ5VZR2 741 aa22.68■■□□□ 1.22
SGCE-208ENST00000450385 KRT27Q7Z3Y8 459 aa22.68■■□□□ 1.22
SGCE-208ENST00000450385 AKAP12Q02952 1782 aa22.68■■□□□ 1.22
SGCE-208ENST00000450385 CPSF1Q10570 1443 aaKnown RBP22.67■■□□□ 1.22
SGCE-208ENST00000450385 NLRP6P59044 892 aa22.67■■□□□ 1.22
SGCE-208ENST00000450385 EVA1CP58658 441 aa22.66■■□□□ 1.22
SGCE-208ENST00000450385 NRKQ7Z2Y5 1582 aa22.66■■□□□ 1.22
SGCE-208ENST00000450385 BLMP54132 1417 aaPredicted RBP22.65■■□□□ 1.22
SGCE-208ENST00000450385 SPATA31A1Q5TZJ5 1347 aa22.64■■□□□ 1.22
SGCE-208ENST00000450385 TTC21BQ7Z4L5 1316 aa22.64■■□□□ 1.22
SGCE-208ENST00000450385 FAM98CQ17RN3 349 aaKnown RBP22.64■■□□□ 1.21
SGCE-208ENST00000450385 KCNH5Q8NCM2 988 aa22.64■■□□□ 1.21
SGCE-208ENST00000450385 CHRNA2Q15822 529 aa22.63■■□□□ 1.21
SGCE-208ENST00000450385 THRAP3Q9Y2W1 955 aaKnown RBP22.63■■□□□ 1.21
SGCE-208ENST00000450385 SLIT3O75094 1523 aa22.62■■□□□ 1.21
SGCE-208ENST00000450385 BARGINQ6ZT62 677 aa22.62■■□□□ 1.21
SGCE-208ENST00000450385 KTN1Q86UP2 1357 aaKnown RBP22.62■■□□□ 1.21
SGCE-208ENST00000450385 SF3B2Q13435 895 aaKnown RBP22.61■■□□□ 1.21
SGCE-208ENST00000450385 LMO7Q8WWI1 1683 aa22.61■■□□□ 1.21
SGCE-208ENST00000450385 AATKQ6ZMQ8 1374 aa22.61■■□□□ 1.21
SGCE-208ENST00000450385 NINLQ9Y2I6 1382 aa22.61■■□□□ 1.21
SGCE-208ENST00000450385 PIK3C2AO00443 1686 aa22.6■■□□□ 1.21
SGCE-208ENST00000450385 CAMTA1Q9Y6Y1 1673 aa22.59■■□□□ 1.21
SGCE-208ENST00000450385 A0A0G2JS52 829 aa22.59■■□□□ 1.21
SGCE-208ENST00000450385 MYT1Q01538 1121 aa22.59■■□□□ 1.21
SGCE-208ENST00000450385 HDGFL2Q7Z4V5 671 aaPredicted RBP22.59■■□□□ 1.21
SGCE-208ENST00000450385 TERF2IPQ9NYB0 399 aa22.59■■□□□ 1.21
SGCE-208ENST00000450385 MON2Q7Z3U7 1717 aa22.58■■□□□ 1.21
SGCE-208ENST00000450385 STRN4Q9NRL3 753 aa22.58■■□□□ 1.21
SGCE-208ENST00000450385 THSD7AQ9UPZ6 1657 aa22.58■■□□□ 1.2
SGCE-208ENST00000450385 C11orf95C9JLR9 678 aaPredicted RBP22.57■■□□□ 1.2
SGCE-208ENST00000450385 ST20-MTHFSA0A0A6YYL1 179 aa22.56■■□□□ 1.2
SGCE-208ENST00000450385 TCP11L2Q8N4U5 519 aa22.56■■□□□ 1.2
SGCE-208ENST00000450385 TESK2Q96S53 571 aa22.56■■□□□ 1.2
SGCE-208ENST00000450385 USP31Q70CQ4 1352 aa22.55■■□□□ 1.2
SGCE-208ENST00000450385 ARHGEF25Q86VW2 580 aa22.54■■□□□ 1.2
SGCE-208ENST00000450385 TMC1Q8TDI8 760 aa22.54■■□□□ 1.2
SGCE-208ENST00000450385 COL5A2P05997 1499 aaPredicted RBP22.54■■□□□ 1.2
SGCE-208ENST00000450385 LARP1Q6PKG0 1096 aaKnown RBP22.53■■□□□ 1.2
SGCE-208ENST00000450385 ZRANB1Q9UGI0 708 aa22.53■■□□□ 1.2
SGCE-208ENST00000450385 EDC4Q6P2E9 1401 aaKnown RBP22.53■■□□□ 1.2
SGCE-208ENST00000450385 USP54Q70EL1 1684 aa22.52■■□□□ 1.2
SGCE-208ENST00000450385 ABCC6O95255 1503 aa22.52■■□□□ 1.2
SGCE-208ENST00000450385 CDCA8Q53HL2 280 aa22.52■■□□□ 1.2
SGCE-208ENST00000450385 FAM196AQ6ZSG2 479 aa22.52■■□□□ 1.2
SGCE-208ENST00000450385 SLC12A5Q9H2X9 1139 aa22.52■■□□□ 1.2
SGCE-208ENST00000450385 COL18A1P39060 1754 aa22.51■■□□□ 1.19
SGCE-208ENST00000450385 CRB1P82279 1406 aa22.51■■□□□ 1.19
SGCE-208ENST00000450385 CD163L1Q9NR16 1453 aa22.51■■□□□ 1.19
SGCE-208ENST00000450385 TMF1P82094 1093 aa22.5■■□□□ 1.19
SGCE-208ENST00000450385 BAG6P46379 1132 aa22.49■■□□□ 1.19
SGCE-208ENST00000450385 PDE3BQ13370 1112 aa22.49■■□□□ 1.19
SGCE-208ENST00000450385 CDCA7Q9BWT1 371 aaPredicted RBP22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms