RNA–Protein interactions for RNA: ENST00000450000.5

CPSF7-208, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-208ENST00000450000 PLEKHG3A1L390 1219 aa31.38■■■□□ 2.61
CPSF7-208ENST00000450000 CABP2Q9NPB3 220 aa31.38■■■□□ 2.61
CPSF7-208ENST00000450000 PRDM11Q9NQV5 511 aa31.38■■■□□ 2.61
CPSF7-208ENST00000450000 ROCK2O75116 1388 aaKnown RBP31.38■■■□□ 2.61
CPSF7-208ENST00000450000 TNKS1BP1Q9C0C2 1729 aaKnown RBP31.38■■■□□ 2.61
CPSF7-208ENST00000450000 TRPM3Q9HCF6 1732 aaPredicted RBP31.37■■■□□ 2.61
CPSF7-208ENST00000450000 NUTM2GQ5VZR2 741 aa31.35■■■□□ 2.61
CPSF7-208ENST00000450000 SEPT12Q8IYM1 358 aa31.35■■■□□ 2.61
CPSF7-208ENST00000450000 POLR3AO14802 1390 aaPredicted RBP31.34■■■□□ 2.61
CPSF7-208ENST00000450000 ABTB2Q8N961 1025 aa31.34■■■□□ 2.61
CPSF7-208ENST00000450000 CCDC125Q86Z20 511 aa31.33■■■□□ 2.61
CPSF7-208ENST00000450000 PPIP5K1Q6PFW1 1433 aa31.32■■■□□ 2.61
CPSF7-208ENST00000450000 EVC2Q86UK5 1308 aa31.32■■■□□ 2.6
CPSF7-208ENST00000450000 ALS2Q96Q42 1657 aa31.32■■■□□ 2.6
CPSF7-208ENST00000450000 ABCA3Q99758 1704 aa31.31■■■□□ 2.6
CPSF7-208ENST00000450000 TRIM26Q12899 539 aaPredicted RBP31.3■■■□□ 2.6
CPSF7-208ENST00000450000 GLI3P10071 1580 aa31.3■■■□□ 2.6
CPSF7-208ENST00000450000 PLCH1Q4KWH8 1693 aa31.29■■■□□ 2.6
CPSF7-208ENST00000450000 NWD2Q9ULI1 1742 aa31.29■■■□□ 2.6
CPSF7-208ENST00000450000 ZC3H6P61129 1189 aaKnown RBP31.28■■■□□ 2.6
CPSF7-208ENST00000450000 TONSLQ96HA7 1378 aa31.28■■■□□ 2.6
CPSF7-208ENST00000450000 CABP1Q9NZU7 370 aa31.27■■■□□ 2.6
CPSF7-208ENST00000450000 SF3B2Q13435 895 aaKnown RBP31.26■■■□□ 2.59
CPSF7-208ENST00000450000 FAM98CQ17RN3 349 aaKnown RBP31.26■■■□□ 2.59
CPSF7-208ENST00000450000 NLRP13Q86W25 1043 aa31.26■■■□□ 2.59
CPSF7-208ENST00000450000 KRT27Q7Z3Y8 459 aa31.25■■■□□ 2.59
CPSF7-208ENST00000450000 KIAA0232Q92628 1395 aa31.25■■■□□ 2.59
CPSF7-208ENST00000450000 COL14A1Q05707 1796 aaKnown RBP31.25■■■□□ 2.59
CPSF7-208ENST00000450000 CHRNA2Q15822 529 aa31.24■■■□□ 2.59
CPSF7-208ENST00000450000 QRICH2Q9H0J4 1663 aa31.23■■■□□ 2.59
CPSF7-208ENST00000450000 ONECUT3O60422 494 aaPredicted RBP31.23■■■□□ 2.59
CPSF7-208ENST00000450000 EVA1CP58658 441 aa31.23■■■□□ 2.59
CPSF7-208ENST00000450000 STRN4Q9NRL3 753 aa31.23■■■□□ 2.59
CPSF7-208ENST00000450000 TOPAZ1Q8N9V7 1692 aa31.22■■■□□ 2.59
CPSF7-208ENST00000450000 TRPM1Q7Z4N2 1603 aa31.22■■■□□ 2.59
CPSF7-208ENST00000450000 BRD4O60885 1362 aaPredicted RBP31.21■■■□□ 2.59
CPSF7-208ENST00000450000 CARD11Q9BXL7 1154 aa31.21■■■□□ 2.59
CPSF7-208ENST00000450000 SPATA31A5Q5VU36 1347 aa31.18■■■□□ 2.58
CPSF7-208ENST00000450000 SPATA31A7Q8IWB4 1347 aa31.18■■■□□ 2.58
CPSF7-208ENST00000450000 NLRP6P59044 892 aa31.16■■■□□ 2.58
CPSF7-208ENST00000450000 ZRANB1Q9UGI0 708 aa31.16■■■□□ 2.58
CPSF7-208ENST00000450000 BLMP54132 1417 aaPredicted RBP31.15■■■□□ 2.58
CPSF7-208ENST00000450000 ZBTB7CA1YPR0 619 aa31.15■■■□□ 2.58
CPSF7-208ENST00000450000 ZNF692Q9BU19 519 aaPredicted RBP31.15■■■□□ 2.58
CPSF7-208ENST00000450000 GCP02774 474 aa31.13■■■□□ 2.57
CPSF7-208ENST00000450000 USP35Q9P2H5 1018 aa31.12■■■□□ 2.57
CPSF7-208ENST00000450000 USP6P35125 1406 aa31.12■■■□□ 2.57
CPSF7-208ENST00000450000 NRAPQ86VF7 1730 aa31.12■■■□□ 2.57
CPSF7-208ENST00000450000 USP19O94966 1318 aa31.11■■■□□ 2.57
CPSF7-208ENST00000450000 CRYBG1Q9Y4K1 1723 aa31.1■■■□□ 2.57
CPSF7-208ENST00000450000 PHRF1Q9P1Y6 1649 aaKnown RBP31.09■■■□□ 2.57
CPSF7-208ENST00000450000 SPATA31A1Q5TZJ5 1347 aa31.09■■■□□ 2.57
CPSF7-208ENST00000450000 CPDO75976 1380 aa31.07■■■□□ 2.56
CPSF7-208ENST00000450000 BRWD3Q6RI45 1802 aa31.05■■■□□ 2.56
CPSF7-208ENST00000450000 DEFB132Q7Z7B7 95 aa31.04■■■□□ 2.56
CPSF7-208ENST00000450000 TMC1Q8TDI8 760 aa31.04■■■□□ 2.56
CPSF7-208ENST00000450000 BAG6P46379 1132 aa31.03■■■□□ 2.56
CPSF7-208ENST00000450000 SSH2Q76I76 1423 aa31.03■■■□□ 2.56
CPSF7-208ENST00000450000 NRKQ7Z2Y5 1582 aa31.03■■■□□ 2.56
CPSF7-208ENST00000450000 TTC21BQ7Z4L5 1316 aa31.02■■■□□ 2.56
CPSF7-208ENST00000450000 LARP1Q6PKG0 1096 aaKnown RBP31.02■■■□□ 2.56
CPSF7-208ENST00000450000 KTN1Q86UP2 1357 aaKnown RBP31.01■■■□□ 2.55
CPSF7-208ENST00000450000 TTC21AQ8NDW8 1320 aa31■■■□□ 2.55
CPSF7-208ENST00000450000 PDE3BQ13370 1112 aa31■■■□□ 2.55
CPSF7-208ENST00000450000 TCP11L2Q8N4U5 519 aa31■■■□□ 2.55
CPSF7-208ENST00000450000 KCNH5Q8NCM2 988 aa31■■■□□ 2.55
CPSF7-208ENST00000450000 SBNO2Q9Y2G9 1366 aa31■■■□□ 2.55
CPSF7-208ENST00000450000 FAM182BQ5T319 152 aa30.99■■■□□ 2.55
CPSF7-208ENST00000450000 SOX12O15370 315 aa30.98■■■□□ 2.55
CPSF7-208ENST00000450000 BARGINQ6ZT62 677 aa30.98■■■□□ 2.55
CPSF7-208ENST00000450000 HDGFL2Q7Z4V5 671 aaPredicted RBP30.98■■■□□ 2.55
CPSF7-208ENST00000450000 THRAP3Q9Y2W1 955 aaKnown RBP30.96■■■□□ 2.55
CPSF7-208ENST00000450000 CAMTA1Q9Y6Y1 1673 aa30.96■■■□□ 2.55
CPSF7-208ENST00000450000 SLC24A1O60721 1099 aa30.95■■■□□ 2.55
CPSF7-208ENST00000450000 FAM196AQ6ZSG2 479 aa30.95■■■□□ 2.55
CPSF7-208ENST00000450000 SUGP2Q8IX01 1082 aaKnown RBP eCLIP30.94■■■□□ 2.54
CPSF7-208ENST00000450000 AATKQ6ZMQ8 1374 aa30.93■■■□□ 2.54
CPSF7-208ENST00000450000 EP400Q96L91 3159 aa30.93■■■□□ 2.54
CPSF7-208ENST00000450000 TOM1L2Q6ZVM7 507 aa30.92■■■□□ 2.54
CPSF7-208ENST00000450000 TERF2IPQ9NYB0 399 aa30.92■■■□□ 2.54
CPSF7-208ENST00000450000 CPSF1Q10570 1443 aaKnown RBP30.91■■■□□ 2.54
CPSF7-208ENST00000450000 CSB-PGBD3P0DP91 1061 aa30.9■■■□□ 2.54
CPSF7-208ENST00000450000 COL5A2P05997 1499 aaPredicted RBP30.89■■■□□ 2.54
CPSF7-208ENST00000450000 SLIT3O75094 1523 aa30.89■■■□□ 2.54
CPSF7-208ENST00000450000 THSD7AQ9UPZ6 1657 aa30.89■■■□□ 2.54
CPSF7-208ENST00000450000 SLC12A5Q9H2X9 1139 aa30.88■■■□□ 2.53
CPSF7-208ENST00000450000 CRB1P82279 1406 aa30.88■■■□□ 2.53
CPSF7-208ENST00000450000 ST20-MTHFSA0A0A6YYL1 179 aa30.87■■■□□ 2.53
CPSF7-208ENST00000450000 LMO7Q8WWI1 1683 aa30.87■■■□□ 2.53
CPSF7-208ENST00000450000 TRIM37O94972 964 aa30.86■■■□□ 2.53
CPSF7-208ENST00000450000 EN1Q05925 392 aaPredicted RBP30.86■■■□□ 2.53
CPSF7-208ENST00000450000 ARHGEF25Q86VW2 580 aa30.86■■■□□ 2.53
CPSF7-208ENST00000450000 PUS7Q96PZ0 661 aaKnown RBP30.86■■■□□ 2.53
CPSF7-208ENST00000450000 PIK3C2AO00443 1686 aa30.86■■■□□ 2.53
CPSF7-208ENST00000450000 PCGF6Q9BYE7 350 aa30.85■■■□□ 2.53
CPSF7-208ENST00000450000 AKAP12Q02952 1782 aa30.82■■■□□ 2.52
CPSF7-208ENST00000450000 WDR17Q8IZU2 1322 aa30.81■■■□□ 2.52
CPSF7-208ENST00000450000 C11orf95C9JLR9 678 aaPredicted RBP30.81■■■□□ 2.52
CPSF7-208ENST00000450000 APBA3O96018 575 aa30.81■■■□□ 2.52
CPSF7-208ENST00000450000 NME9Q86XW9 330 aa30.81■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms